Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0283 and Echvi_0284 are separated by 216 nucleotides Echvi_0284 and Echvi_0285 are separated by 6 nucleotides Echvi_0285 and Echvi_0286 are separated by 17 nucleotides Echvi_0286 and Echvi_0287 are separated by 29 nucleotides
Echvi_0283: Echvi_0283 - PAP2 superfamily., at 294,587 to 295,933
_0283
Echvi_0284: Echvi_0284 - nicotinate (nicotinamide) nucleotide adenylyltransferase, at 296,150 to 296,716
_0284
Echvi_0285: Echvi_0285 - guanylate kinase, at 296,723 to 297,295
_0285
Echvi_0286: Echvi_0286 - hypothetical protein, at 297,313 to 297,585
_0286
Echvi_0287: Echvi_0287 - RNA polymerase sigma factor, sigma-70 family, at 297,615 to 298,205
_0287
Position (kb)
296
297 Strain fitness (log2 ratio)
-2
-1
0
1 at 295.184 kb on + strand, within Echvi_0283 at 295.185 kb on - strand, within Echvi_0283 at 295.302 kb on - strand, within Echvi_0283 at 295.302 kb on - strand, within Echvi_0283 at 295.308 kb on + strand, within Echvi_0283 at 295.309 kb on - strand, within Echvi_0283 at 295.309 kb on - strand, within Echvi_0283 at 295.309 kb on - strand, within Echvi_0283 at 295.309 kb on - strand, within Echvi_0283 at 295.508 kb on - strand, within Echvi_0283 at 295.589 kb on + strand, within Echvi_0283 at 295.641 kb on - strand, within Echvi_0283 at 295.748 kb on - strand, within Echvi_0283 at 295.761 kb on - strand, within Echvi_0283 at 295.761 kb on - strand, within Echvi_0283 at 295.772 kb on - strand, within Echvi_0283 at 295.816 kb on + strand at 295.826 kb on - strand at 295.924 kb on + strand at 296.084 kb on + strand at 296.084 kb on + strand at 296.085 kb on - strand at 296.085 kb on - strand at 296.115 kb on + strand at 296.115 kb on + strand at 296.115 kb on + strand at 296.115 kb on + strand at 296.116 kb on - strand at 296.116 kb on - strand at 296.116 kb on - strand at 296.148 kb on + strand at 296.725 kb on - strand at 296.725 kb on - strand at 296.725 kb on - strand at 297.457 kb on - strand, within Echvi_0286 at 297.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 295,184 + Echvi_0283 0.44 +1.2 295,185 - Echvi_0283 0.44 -0.7 295,302 - Echvi_0283 0.53 +0.2 295,302 - Echvi_0283 0.53 -0.6 295,308 + Echvi_0283 0.54 -0.4 295,309 - Echvi_0283 0.54 -0.8 295,309 - Echvi_0283 0.54 +0.1 295,309 - Echvi_0283 0.54 -0.8 295,309 - Echvi_0283 0.54 +0.6 295,508 - Echvi_0283 0.68 +0.1 295,589 + Echvi_0283 0.74 -0.1 295,641 - Echvi_0283 0.78 -1.7 295,748 - Echvi_0283 0.86 +0.7 295,761 - Echvi_0283 0.87 +1.0 295,761 - Echvi_0283 0.87 -0.6 295,772 - Echvi_0283 0.88 -0.0 295,816 + +0.8 295,826 - -0.1 295,924 + +1.7 296,084 + -1.9 296,084 + +0.3 296,085 - +0.2 296,085 - -1.2 296,115 + -0.2 296,115 + -0.5 296,115 + -0.2 296,115 + -1.1 296,116 - +0.5 296,116 - -0.7 296,116 - +1.2 296,148 + -2.2 296,725 - -1.0 296,725 - -0.8 296,725 - +0.3 297,457 - Echvi_0286 0.53 +0.6 297,635 - -0.2
Or see this region's nucleotide sequence