Experiment: m.b. Carbenicillin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1850 and B158DRAFT_1851 are separated by 200 nucleotides B158DRAFT_1851 and B158DRAFT_1852 overlap by 62 nucleotides B158DRAFT_1852 and B158DRAFT_1853 are separated by 60 nucleotides B158DRAFT_1853 and B158DRAFT_1854 are separated by 188 nucleotides
B158DRAFT_1850: B158DRAFT_1850 - ATP-dependent RNA helicase CsdA (EC 5.99.1.-), at 963 to 2,756
_1850
B158DRAFT_1851: B158DRAFT_1851 - hypothetical protein, at 2,957 to 3,082
_1851
B158DRAFT_1852: B158DRAFT_1852 - hypothetical protein, at 3,021 to 3,512
_1852
B158DRAFT_1853: B158DRAFT_1853 - Imidazolonepropionase and related amidohydrolases, at 3,573 to 4,871
_1853
B158DRAFT_1854: B158DRAFT_1854 - UDP-N-acetylmuramate dehydrogenase (EC 1.1.1.158), at 5,060 to 6,091
_1854
Position (kb) 3
4
5 Strain fitness (log2 ratio) -2
-1
0
1 at 2.598 kb on - strand at 2.722 kb on - strand at 2.723 kb on - strand at 2.767 kb on - strand at 2.868 kb on + strand at 2.868 kb on + strand at 2.868 kb on + strand at 2.873 kb on + strand at 2.876 kb on - strand at 2.923 kb on + strand at 2.929 kb on - strand at 2.980 kb on + strand, within B158DRAFT_1851 at 3.006 kb on + strand, within B158DRAFT_1851 at 3.014 kb on - strand, within B158DRAFT_1851 at 3.014 kb on - strand, within B158DRAFT_1851 at 3.039 kb on + strand at 3.187 kb on + strand, within B158DRAFT_1852 at 3.297 kb on + strand, within B158DRAFT_1852 at 3.398 kb on + strand, within B158DRAFT_1852 at 3.633 kb on - strand at 3.667 kb on - strand at 3.681 kb on - strand at 3.716 kb on + strand, within B158DRAFT_1853 at 3.716 kb on + strand, within B158DRAFT_1853 at 3.716 kb on + strand, within B158DRAFT_1853 at 3.716 kb on + strand, within B158DRAFT_1853 at 3.724 kb on - strand, within B158DRAFT_1853 at 3.724 kb on - strand, within B158DRAFT_1853 at 3.726 kb on + strand, within B158DRAFT_1853 at 3.726 kb on + strand, within B158DRAFT_1853 at 3.726 kb on + strand, within B158DRAFT_1853 at 3.734 kb on - strand, within B158DRAFT_1853 at 3.734 kb on - strand, within B158DRAFT_1853 at 3.734 kb on - strand, within B158DRAFT_1853 at 3.734 kb on - strand, within B158DRAFT_1853 at 3.734 kb on - strand, within B158DRAFT_1853 at 3.898 kb on - strand, within B158DRAFT_1853 at 3.898 kb on - strand, within B158DRAFT_1853 at 3.912 kb on - strand, within B158DRAFT_1853 at 3.983 kb on + strand, within B158DRAFT_1853 at 4.046 kb on + strand, within B158DRAFT_1853 at 4.046 kb on + strand, within B158DRAFT_1853 at 4.046 kb on + strand, within B158DRAFT_1853 at 4.054 kb on - strand, within B158DRAFT_1853 at 4.054 kb on - strand, within B158DRAFT_1853 at 4.054 kb on - strand, within B158DRAFT_1853 at 4.054 kb on - strand, within B158DRAFT_1853 at 4.059 kb on - strand, within B158DRAFT_1853 at 4.123 kb on + strand, within B158DRAFT_1853 at 4.124 kb on - strand, within B158DRAFT_1853 at 4.131 kb on - strand, within B158DRAFT_1853 at 4.150 kb on + strand, within B158DRAFT_1853 at 4.158 kb on - strand, within B158DRAFT_1853 at 4.167 kb on + strand, within B158DRAFT_1853 at 4.197 kb on - strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.200 kb on + strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.208 kb on - strand, within B158DRAFT_1853 at 4.267 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.280 kb on + strand, within B158DRAFT_1853 at 4.288 kb on + strand, within B158DRAFT_1853 at 4.288 kb on - strand, within B158DRAFT_1853 at 4.288 kb on - strand, within B158DRAFT_1853 at 4.288 kb on - strand, within B158DRAFT_1853 at 4.288 kb on - strand, within B158DRAFT_1853 at 4.288 kb on - strand, within B158DRAFT_1853 at 4.288 kb on - strand, within B158DRAFT_1853 at 4.290 kb on + strand, within B158DRAFT_1853 at 4.290 kb on + strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.298 kb on - strand, within B158DRAFT_1853 at 4.321 kb on + strand, within B158DRAFT_1853 at 4.323 kb on - strand, within B158DRAFT_1853 at 4.323 kb on - strand, within B158DRAFT_1853 at 4.342 kb on - strand, within B158DRAFT_1853 at 4.355 kb on - strand, within B158DRAFT_1853 at 4.363 kb on - strand, within B158DRAFT_1853 at 4.409 kb on + strand, within B158DRAFT_1853 at 4.409 kb on + strand, within B158DRAFT_1853 at 4.414 kb on + strand, within B158DRAFT_1853 at 4.414 kb on + strand, within B158DRAFT_1853 at 4.414 kb on + strand, within B158DRAFT_1853 at 4.417 kb on - strand, within B158DRAFT_1853 at 4.417 kb on - strand, within B158DRAFT_1853 at 4.422 kb on - strand, within B158DRAFT_1853 at 4.422 kb on - strand, within B158DRAFT_1853 at 4.422 kb on - strand, within B158DRAFT_1853 at 4.422 kb on - strand, within B158DRAFT_1853 at 4.424 kb on + strand, within B158DRAFT_1853 at 4.427 kb on - strand, within B158DRAFT_1853 at 4.485 kb on + strand, within B158DRAFT_1853 at 4.548 kb on + strand, within B158DRAFT_1853 at 4.548 kb on + strand, within B158DRAFT_1853 at 4.556 kb on - strand, within B158DRAFT_1853 at 4.584 kb on + strand, within B158DRAFT_1853 at 4.593 kb on + strand, within B158DRAFT_1853 at 4.641 kb on + strand, within B158DRAFT_1853 at 4.670 kb on - strand, within B158DRAFT_1853 at 4.709 kb on + strand, within B158DRAFT_1853 at 4.709 kb on + strand, within B158DRAFT_1853 at 4.709 kb on + strand, within B158DRAFT_1853 at 4.709 kb on + strand, within B158DRAFT_1853 at 4.717 kb on - strand, within B158DRAFT_1853 at 4.717 kb on - strand, within B158DRAFT_1853 at 4.719 kb on + strand, within B158DRAFT_1853 at 4.730 kb on + strand, within B158DRAFT_1853 at 4.731 kb on + strand, within B158DRAFT_1853 at 4.731 kb on + strand, within B158DRAFT_1853 at 4.739 kb on - strand, within B158DRAFT_1853 at 4.774 kb on + strand at 4.782 kb on - strand at 4.806 kb on + strand at 4.813 kb on - strand at 4.814 kb on - strand at 4.825 kb on + strand at 4.825 kb on + strand at 4.845 kb on + strand at 4.853 kb on - strand at 4.853 kb on - strand at 4.853 kb on - strand at 4.853 kb on - strand at 4.853 kb on - strand at 4.853 kb on - strand at 4.863 kb on - strand at 4.873 kb on + strand at 4.881 kb on - strand at 4.932 kb on - strand at 4.937 kb on + strand at 4.937 kb on + strand at 4.937 kb on + strand at 4.945 kb on - strand at 4.945 kb on - strand at 5.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.005 mg/ml remove 2,598 - +0.1 2,722 - +0.5 2,723 - +0.0 2,767 - -0.5 2,868 + +0.3 2,868 + +0.0 2,868 + -0.1 2,873 + +0.2 2,876 - +0.2 2,923 + -0.4 2,929 - +0.1 2,980 + B158DRAFT_1851 0.18 +0.3 3,006 + B158DRAFT_1851 0.39 +0.1 3,014 - B158DRAFT_1851 0.45 -0.5 3,014 - B158DRAFT_1851 0.45 -0.4 3,039 + -0.2 3,187 + B158DRAFT_1852 0.34 -0.3 3,297 + B158DRAFT_1852 0.56 -0.4 3,398 + B158DRAFT_1852 0.77 -0.5 3,633 - -1.0 3,667 - -0.0 3,681 - -0.1 3,716 + B158DRAFT_1853 0.11 +0.1 3,716 + B158DRAFT_1853 0.11 -0.4 3,716 + B158DRAFT_1853 0.11 -0.3 3,716 + B158DRAFT_1853 0.11 -0.1 3,724 - B158DRAFT_1853 0.12 +0.0 3,724 - B158DRAFT_1853 0.12 -0.1 3,726 + B158DRAFT_1853 0.12 -1.4 3,726 + B158DRAFT_1853 0.12 -0.6 3,726 + B158DRAFT_1853 0.12 -0.4 3,734 - B158DRAFT_1853 0.12 +0.1 3,734 - B158DRAFT_1853 0.12 -1.0 3,734 - B158DRAFT_1853 0.12 -0.6 3,734 - B158DRAFT_1853 0.12 -0.7 3,734 - B158DRAFT_1853 0.12 +0.2 3,898 - B158DRAFT_1853 0.25 -0.2 3,898 - B158DRAFT_1853 0.25 +0.3 3,912 - B158DRAFT_1853 0.26 +0.5 3,983 + B158DRAFT_1853 0.32 -0.2 4,046 + B158DRAFT_1853 0.36 +0.9 4,046 + B158DRAFT_1853 0.36 -0.3 4,046 + B158DRAFT_1853 0.36 -0.4 4,054 - B158DRAFT_1853 0.37 -0.4 4,054 - B158DRAFT_1853 0.37 +0.2 4,054 - B158DRAFT_1853 0.37 -0.7 4,054 - B158DRAFT_1853 0.37 -0.8 4,059 - B158DRAFT_1853 0.37 +0.2 4,123 + B158DRAFT_1853 0.42 -0.6 4,124 - B158DRAFT_1853 0.42 -0.6 4,131 - B158DRAFT_1853 0.43 -0.5 4,150 + B158DRAFT_1853 0.44 -0.1 4,158 - B158DRAFT_1853 0.45 -0.6 4,167 + B158DRAFT_1853 0.46 -0.3 4,197 - B158DRAFT_1853 0.48 -0.3 4,200 + B158DRAFT_1853 0.48 -0.1 4,200 + B158DRAFT_1853 0.48 -0.2 4,200 + B158DRAFT_1853 0.48 -0.5 4,200 + B158DRAFT_1853 0.48 +0.6 4,200 + B158DRAFT_1853 0.48 +0.0 4,200 + B158DRAFT_1853 0.48 -0.3 4,200 + B158DRAFT_1853 0.48 -0.6 4,200 + B158DRAFT_1853 0.48 -0.3 4,200 + B158DRAFT_1853 0.48 -0.2 4,200 + B158DRAFT_1853 0.48 -0.9 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.9 4,200 + B158DRAFT_1853 0.48 -0.2 4,200 + B158DRAFT_1853 0.48 +0.9 4,200 + B158DRAFT_1853 0.48 -1.9 4,200 + B158DRAFT_1853 0.48 +0.7 4,200 + B158DRAFT_1853 0.48 -0.1 4,200 + B158DRAFT_1853 0.48 -0.6 4,200 + B158DRAFT_1853 0.48 -0.7 4,200 + B158DRAFT_1853 0.48 +0.1 4,200 + B158DRAFT_1853 0.48 +0.8 4,200 + B158DRAFT_1853 0.48 -1.2 4,200 + B158DRAFT_1853 0.48 -0.8 4,200 + B158DRAFT_1853 0.48 -0.1 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.3 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.5 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.1 4,200 + B158DRAFT_1853 0.48 +0.2 4,200 + B158DRAFT_1853 0.48 -0.3 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.5 4,200 + B158DRAFT_1853 0.48 -0.6 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.3 4,200 + B158DRAFT_1853 0.48 -0.4 4,200 + B158DRAFT_1853 0.48 -0.5 4,208 - B158DRAFT_1853 0.49 +0.1 4,208 - B158DRAFT_1853 0.49 -0.4 4,208 - B158DRAFT_1853 0.49 -0.1 4,208 - B158DRAFT_1853 0.49 -1.0 4,208 - B158DRAFT_1853 0.49 -0.3 4,208 - B158DRAFT_1853 0.49 +0.5 4,208 - B158DRAFT_1853 0.49 -0.5 4,208 - B158DRAFT_1853 0.49 -0.4 4,208 - B158DRAFT_1853 0.49 -0.5 4,208 - B158DRAFT_1853 0.49 -0.8 4,208 - B158DRAFT_1853 0.49 +0.1 4,208 - B158DRAFT_1853 0.49 -0.4 4,208 - B158DRAFT_1853 0.49 -0.2 4,208 - B158DRAFT_1853 0.49 -0.3 4,208 - B158DRAFT_1853 0.49 +0.2 4,208 - B158DRAFT_1853 0.49 -0.8 4,208 - B158DRAFT_1853 0.49 -0.1 4,208 - B158DRAFT_1853 0.49 -0.6 4,208 - B158DRAFT_1853 0.49 +1.0 4,208 - B158DRAFT_1853 0.49 -0.3 4,208 - B158DRAFT_1853 0.49 +0.7 4,208 - B158DRAFT_1853 0.49 -0.4 4,208 - B158DRAFT_1853 0.49 -0.8 4,208 - B158DRAFT_1853 0.49 -1.2 4,208 - B158DRAFT_1853 0.49 +0.0 4,208 - B158DRAFT_1853 0.49 -0.5 4,208 - B158DRAFT_1853 0.49 -0.0 4,208 - B158DRAFT_1853 0.49 -0.1 4,208 - B158DRAFT_1853 0.49 -0.6 4,208 - B158DRAFT_1853 0.49 +0.1 4,208 - B158DRAFT_1853 0.49 -0.7 4,267 + B158DRAFT_1853 0.53 +0.4 4,280 + B158DRAFT_1853 0.54 +0.0 4,280 + B158DRAFT_1853 0.54 -0.2 4,280 + B158DRAFT_1853 0.54 -0.5 4,280 + B158DRAFT_1853 0.54 -1.0 4,280 + B158DRAFT_1853 0.54 +0.3 4,280 + B158DRAFT_1853 0.54 -1.0 4,280 + B158DRAFT_1853 0.54 -0.4 4,280 + B158DRAFT_1853 0.54 +0.2 4,288 + B158DRAFT_1853 0.55 -0.8 4,288 - B158DRAFT_1853 0.55 +0.1 4,288 - B158DRAFT_1853 0.55 +0.0 4,288 - B158DRAFT_1853 0.55 +0.0 4,288 - B158DRAFT_1853 0.55 -0.7 4,288 - B158DRAFT_1853 0.55 -0.4 4,288 - B158DRAFT_1853 0.55 -0.9 4,290 + B158DRAFT_1853 0.55 -0.9 4,290 + B158DRAFT_1853 0.55 -0.3 4,298 - B158DRAFT_1853 0.56 -0.0 4,298 - B158DRAFT_1853 0.56 -0.1 4,298 - B158DRAFT_1853 0.56 -0.5 4,298 - B158DRAFT_1853 0.56 -0.3 4,298 - B158DRAFT_1853 0.56 -0.3 4,298 - B158DRAFT_1853 0.56 -0.2 4,298 - B158DRAFT_1853 0.56 -0.6 4,321 + B158DRAFT_1853 0.58 -0.7 4,323 - B158DRAFT_1853 0.58 +0.0 4,323 - B158DRAFT_1853 0.58 -0.1 4,342 - B158DRAFT_1853 0.59 -0.3 4,355 - B158DRAFT_1853 0.60 -0.7 4,363 - B158DRAFT_1853 0.61 -0.1 4,409 + B158DRAFT_1853 0.64 +0.1 4,409 + B158DRAFT_1853 0.64 -0.3 4,414 + B158DRAFT_1853 0.65 -0.6 4,414 + B158DRAFT_1853 0.65 -0.4 4,414 + B158DRAFT_1853 0.65 -0.4 4,417 - B158DRAFT_1853 0.65 +0.4 4,417 - B158DRAFT_1853 0.65 -0.3 4,422 - B158DRAFT_1853 0.65 -0.6 4,422 - B158DRAFT_1853 0.65 -0.3 4,422 - B158DRAFT_1853 0.65 -0.2 4,422 - B158DRAFT_1853 0.65 -0.6 4,424 + B158DRAFT_1853 0.66 -0.5 4,427 - B158DRAFT_1853 0.66 +0.1 4,485 + B158DRAFT_1853 0.70 +0.0 4,548 + B158DRAFT_1853 0.75 +1.2 4,548 + B158DRAFT_1853 0.75 -0.5 4,556 - B158DRAFT_1853 0.76 +0.1 4,584 + B158DRAFT_1853 0.78 -0.4 4,593 + B158DRAFT_1853 0.79 -0.1 4,641 + B158DRAFT_1853 0.82 -0.7 4,670 - B158DRAFT_1853 0.84 -0.0 4,709 + B158DRAFT_1853 0.87 -0.1 4,709 + B158DRAFT_1853 0.87 -0.2 4,709 + B158DRAFT_1853 0.87 -0.2 4,709 + B158DRAFT_1853 0.87 -0.3 4,717 - B158DRAFT_1853 0.88 -0.5 4,717 - B158DRAFT_1853 0.88 -0.3 4,719 + B158DRAFT_1853 0.88 -0.2 4,730 + B158DRAFT_1853 0.89 -0.4 4,731 + B158DRAFT_1853 0.89 -1.1 4,731 + B158DRAFT_1853 0.89 -0.5 4,739 - B158DRAFT_1853 0.90 -0.7 4,774 + -0.4 4,782 - +0.4 4,806 + -0.4 4,813 - -0.3 4,814 - -0.4 4,825 + -0.6 4,825 + -0.7 4,845 + -0.4 4,853 - -0.1 4,853 - +0.3 4,853 - -0.8 4,853 - -0.3 4,853 - -0.2 4,853 - -1.3 4,863 - -0.5 4,873 + -0.4 4,881 - -0.4 4,932 - -0.6 4,937 + +0.2 4,937 + +0.0 4,937 + -0.3 4,945 - -0.2 4,945 - -0.2 5,015 + -0.4
Or see this region's nucleotide sequence