Experiment: m.b. Carbenicillin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1060 and B158DRAFT_1061 are separated by 15 nucleotides B158DRAFT_1061 and B158DRAFT_1062 are separated by 87 nucleotides B158DRAFT_1062 and B158DRAFT_1063 are separated by 12 nucleotides
B158DRAFT_1060: B158DRAFT_1060 - FOG: LysM repeat, at 1,100,886 to 1,102,430
_1060
B158DRAFT_1061: B158DRAFT_1061 - hydroxyacylglutathione hydrolase, at 1,102,446 to 1,103,246
_1061
B158DRAFT_1062: B158DRAFT_1062 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 1,103,334 to 1,104,053
_1062
B158DRAFT_1063: B158DRAFT_1063 - Ribonuclease HI, at 1,104,066 to 1,104,515
_1063
Position (kb)
1102
1103
1104 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1101.472 kb on - strand, within B158DRAFT_1060 at 1101.472 kb on - strand, within B158DRAFT_1060 at 1101.473 kb on - strand, within B158DRAFT_1060 at 1101.483 kb on + strand, within B158DRAFT_1060 at 1101.491 kb on - strand, within B158DRAFT_1060 at 1101.517 kb on - strand, within B158DRAFT_1060 at 1101.528 kb on + strand, within B158DRAFT_1060 at 1101.538 kb on + strand, within B158DRAFT_1060 at 1101.577 kb on + strand, within B158DRAFT_1060 at 1101.577 kb on + strand, within B158DRAFT_1060 at 1101.585 kb on - strand, within B158DRAFT_1060 at 1101.585 kb on - strand, within B158DRAFT_1060 at 1101.651 kb on + strand, within B158DRAFT_1060 at 1101.659 kb on - strand, within B158DRAFT_1060 at 1101.698 kb on + strand, within B158DRAFT_1060 at 1101.706 kb on - strand, within B158DRAFT_1060 at 1101.706 kb on - strand, within B158DRAFT_1060 at 1101.708 kb on - strand, within B158DRAFT_1060 at 1101.801 kb on - strand, within B158DRAFT_1060 at 1101.956 kb on - strand, within B158DRAFT_1060 at 1101.972 kb on - strand, within B158DRAFT_1060 at 1101.984 kb on + strand, within B158DRAFT_1060 at 1101.984 kb on + strand, within B158DRAFT_1060 at 1102.139 kb on + strand, within B158DRAFT_1060 at 1102.147 kb on - strand, within B158DRAFT_1060 at 1102.147 kb on - strand, within B158DRAFT_1060 at 1102.155 kb on + strand, within B158DRAFT_1060 at 1102.185 kb on + strand, within B158DRAFT_1060 at 1102.215 kb on + strand, within B158DRAFT_1060 at 1102.215 kb on + strand, within B158DRAFT_1060 at 1102.223 kb on - strand, within B158DRAFT_1060 at 1102.223 kb on - strand, within B158DRAFT_1060 at 1102.262 kb on - strand, within B158DRAFT_1060 at 1102.290 kb on - strand at 1102.292 kb on + strand at 1102.292 kb on + strand at 1102.292 kb on + strand at 1102.312 kb on + strand at 1102.387 kb on - strand at 1102.492 kb on + strand at 1102.492 kb on + strand at 1102.500 kb on - strand at 1102.500 kb on - strand at 1102.500 kb on - strand at 1102.528 kb on + strand, within B158DRAFT_1061 at 1102.528 kb on + strand, within B158DRAFT_1061 at 1102.544 kb on + strand, within B158DRAFT_1061 at 1102.544 kb on + strand, within B158DRAFT_1061 at 1102.552 kb on - strand, within B158DRAFT_1061 at 1102.613 kb on + strand, within B158DRAFT_1061 at 1102.620 kb on + strand, within B158DRAFT_1061 at 1102.650 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.655 kb on + strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.663 kb on - strand, within B158DRAFT_1061 at 1102.698 kb on + strand, within B158DRAFT_1061 at 1102.763 kb on - strand, within B158DRAFT_1061 at 1102.797 kb on - strand, within B158DRAFT_1061 at 1102.815 kb on - strand, within B158DRAFT_1061 at 1102.821 kb on - strand, within B158DRAFT_1061 at 1102.860 kb on + strand, within B158DRAFT_1061 at 1102.885 kb on + strand, within B158DRAFT_1061 at 1102.886 kb on - strand, within B158DRAFT_1061 at 1102.966 kb on - strand, within B158DRAFT_1061 at 1102.972 kb on - strand, within B158DRAFT_1061 at 1103.009 kb on - strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.034 kb on + strand, within B158DRAFT_1061 at 1103.042 kb on - strand, within B158DRAFT_1061 at 1103.097 kb on - strand, within B158DRAFT_1061 at 1103.115 kb on + strand, within B158DRAFT_1061 at 1103.123 kb on - strand, within B158DRAFT_1061 at 1103.123 kb on - strand, within B158DRAFT_1061 at 1103.130 kb on + strand, within B158DRAFT_1061 at 1103.130 kb on + strand, within B158DRAFT_1061 at 1103.130 kb on + strand, within B158DRAFT_1061 at 1103.138 kb on - strand, within B158DRAFT_1061 at 1103.138 kb on - strand, within B158DRAFT_1061 at 1103.138 kb on - strand, within B158DRAFT_1061 at 1103.216 kb on + strand at 1103.224 kb on - strand at 1103.253 kb on + strand at 1103.261 kb on - strand at 1103.264 kb on + strand at 1103.264 kb on + strand at 1103.264 kb on + strand at 1103.272 kb on + strand at 1103.272 kb on - strand at 1103.272 kb on - strand at 1103.272 kb on - strand at 1103.285 kb on - strand at 1103.306 kb on + strand at 1103.306 kb on + strand at 1103.314 kb on - strand at 1103.314 kb on - strand at 1103.338 kb on + strand at 1103.338 kb on + strand at 1103.346 kb on - strand at 1103.346 kb on - strand at 1103.346 kb on - strand at 1103.346 kb on - strand at 1103.454 kb on + strand, within B158DRAFT_1062 at 1103.459 kb on + strand, within B158DRAFT_1062 at 1103.462 kb on - strand, within B158DRAFT_1062 at 1103.462 kb on - strand, within B158DRAFT_1062 at 1103.462 kb on - strand, within B158DRAFT_1062 at 1103.476 kb on + strand, within B158DRAFT_1062 at 1103.476 kb on + strand, within B158DRAFT_1062 at 1103.484 kb on - strand, within B158DRAFT_1062 at 1103.484 kb on - strand, within B158DRAFT_1062 at 1103.517 kb on - strand, within B158DRAFT_1062 at 1103.519 kb on + strand, within B158DRAFT_1062 at 1103.539 kb on + strand, within B158DRAFT_1062 at 1103.565 kb on + strand, within B158DRAFT_1062 at 1103.573 kb on + strand, within B158DRAFT_1062 at 1103.610 kb on + strand, within B158DRAFT_1062 at 1103.674 kb on + strand, within B158DRAFT_1062 at 1103.690 kb on + strand, within B158DRAFT_1062 at 1103.690 kb on + strand, within B158DRAFT_1062 at 1103.690 kb on + strand, within B158DRAFT_1062 at 1103.698 kb on - strand, within B158DRAFT_1062 at 1103.698 kb on - strand, within B158DRAFT_1062 at 1103.702 kb on + strand, within B158DRAFT_1062 at 1103.702 kb on + strand, within B158DRAFT_1062 at 1103.710 kb on - strand, within B158DRAFT_1062 at 1103.716 kb on - strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.770 kb on + strand, within B158DRAFT_1062 at 1103.778 kb on - strand, within B158DRAFT_1062 at 1103.859 kb on + strand, within B158DRAFT_1062 at 1103.883 kb on + strand, within B158DRAFT_1062 at 1103.883 kb on + strand, within B158DRAFT_1062 at 1103.891 kb on - strand, within B158DRAFT_1062 at 1103.905 kb on + strand, within B158DRAFT_1062 at 1103.906 kb on - strand, within B158DRAFT_1062 at 1103.935 kb on - strand, within B158DRAFT_1062 at 1103.953 kb on - strand, within B158DRAFT_1062 at 1103.999 kb on + strand at 1104.143 kb on - strand, within B158DRAFT_1063 at 1104.143 kb on - strand, within B158DRAFT_1063
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.005 mg/ml remove 1,101,472 - B158DRAFT_1060 0.38 +2.5 1,101,472 - B158DRAFT_1060 0.38 +2.3 1,101,473 - B158DRAFT_1060 0.38 +2.0 1,101,483 + B158DRAFT_1060 0.39 +2.2 1,101,491 - B158DRAFT_1060 0.39 +2.5 1,101,517 - B158DRAFT_1060 0.41 +2.4 1,101,528 + B158DRAFT_1060 0.42 +2.2 1,101,538 + B158DRAFT_1060 0.42 +1.7 1,101,577 + B158DRAFT_1060 0.45 +2.7 1,101,577 + B158DRAFT_1060 0.45 +2.2 1,101,585 - B158DRAFT_1060 0.45 +3.5 1,101,585 - B158DRAFT_1060 0.45 +2.2 1,101,651 + B158DRAFT_1060 0.50 +2.3 1,101,659 - B158DRAFT_1060 0.50 +2.6 1,101,698 + B158DRAFT_1060 0.53 +2.2 1,101,706 - B158DRAFT_1060 0.53 +2.2 1,101,706 - B158DRAFT_1060 0.53 +2.2 1,101,708 - B158DRAFT_1060 0.53 +2.2 1,101,801 - B158DRAFT_1060 0.59 +2.7 1,101,956 - B158DRAFT_1060 0.69 +2.5 1,101,972 - B158DRAFT_1060 0.70 +2.0 1,101,984 + B158DRAFT_1060 0.71 +2.2 1,101,984 + B158DRAFT_1060 0.71 +1.9 1,102,139 + B158DRAFT_1060 0.81 +2.4 1,102,147 - B158DRAFT_1060 0.82 +3.0 1,102,147 - B158DRAFT_1060 0.82 +2.1 1,102,155 + B158DRAFT_1060 0.82 +2.3 1,102,185 + B158DRAFT_1060 0.84 +2.1 1,102,215 + B158DRAFT_1060 0.86 +2.4 1,102,215 + B158DRAFT_1060 0.86 +1.9 1,102,223 - B158DRAFT_1060 0.87 +2.2 1,102,223 - B158DRAFT_1060 0.87 +2.5 1,102,262 - B158DRAFT_1060 0.89 +2.1 1,102,290 - +2.5 1,102,292 + +2.3 1,102,292 + +2.2 1,102,292 + +2.0 1,102,312 + +2.5 1,102,387 - +2.3 1,102,492 + +1.0 1,102,492 + +0.9 1,102,500 - +1.0 1,102,500 - +0.6 1,102,500 - +0.5 1,102,528 + B158DRAFT_1061 0.10 -0.7 1,102,528 + B158DRAFT_1061 0.10 +0.2 1,102,544 + B158DRAFT_1061 0.12 -0.3 1,102,544 + B158DRAFT_1061 0.12 -1.0 1,102,552 - B158DRAFT_1061 0.13 -0.2 1,102,613 + B158DRAFT_1061 0.21 -0.3 1,102,620 + B158DRAFT_1061 0.22 -0.6 1,102,650 + B158DRAFT_1061 0.25 +0.5 1,102,655 + B158DRAFT_1061 0.26 -0.2 1,102,655 + B158DRAFT_1061 0.26 -0.4 1,102,655 + B158DRAFT_1061 0.26 -0.8 1,102,655 + B158DRAFT_1061 0.26 -0.3 1,102,655 + B158DRAFT_1061 0.26 +0.7 1,102,655 + B158DRAFT_1061 0.26 -0.5 1,102,655 + B158DRAFT_1061 0.26 +0.4 1,102,663 - B158DRAFT_1061 0.27 -0.4 1,102,663 - B158DRAFT_1061 0.27 -0.4 1,102,663 - B158DRAFT_1061 0.27 -0.1 1,102,663 - B158DRAFT_1061 0.27 -0.2 1,102,698 + B158DRAFT_1061 0.31 -0.2 1,102,763 - B158DRAFT_1061 0.40 -0.7 1,102,797 - B158DRAFT_1061 0.44 +0.3 1,102,815 - B158DRAFT_1061 0.46 -1.2 1,102,821 - B158DRAFT_1061 0.47 -0.2 1,102,860 + B158DRAFT_1061 0.52 -0.5 1,102,885 + B158DRAFT_1061 0.55 -0.3 1,102,886 - B158DRAFT_1061 0.55 -0.4 1,102,966 - B158DRAFT_1061 0.65 +0.8 1,102,972 - B158DRAFT_1061 0.66 -0.2 1,103,009 - B158DRAFT_1061 0.70 -0.2 1,103,034 + B158DRAFT_1061 0.73 -1.0 1,103,034 + B158DRAFT_1061 0.73 +0.1 1,103,034 + B158DRAFT_1061 0.73 +0.0 1,103,034 + B158DRAFT_1061 0.73 -0.0 1,103,042 - B158DRAFT_1061 0.74 -1.1 1,103,097 - B158DRAFT_1061 0.81 +0.1 1,103,115 + B158DRAFT_1061 0.84 -0.7 1,103,123 - B158DRAFT_1061 0.85 -0.2 1,103,123 - B158DRAFT_1061 0.85 -0.0 1,103,130 + B158DRAFT_1061 0.85 +0.6 1,103,130 + B158DRAFT_1061 0.85 -0.3 1,103,130 + B158DRAFT_1061 0.85 -0.7 1,103,138 - B158DRAFT_1061 0.86 -0.1 1,103,138 - B158DRAFT_1061 0.86 -0.3 1,103,138 - B158DRAFT_1061 0.86 -0.2 1,103,216 + -0.2 1,103,224 - -0.2 1,103,253 + -0.6 1,103,261 - -0.2 1,103,264 + -0.4 1,103,264 + -0.7 1,103,264 + +0.0 1,103,272 + -0.2 1,103,272 - +0.4 1,103,272 - -0.1 1,103,272 - -0.3 1,103,285 - -0.2 1,103,306 + -0.2 1,103,306 + -0.5 1,103,314 - -0.4 1,103,314 - -0.2 1,103,338 + -0.3 1,103,338 + -0.4 1,103,346 - +0.2 1,103,346 - -0.8 1,103,346 - -0.2 1,103,346 - -0.2 1,103,454 + B158DRAFT_1062 0.17 +0.4 1,103,459 + B158DRAFT_1062 0.17 -1.1 1,103,462 - B158DRAFT_1062 0.18 +0.0 1,103,462 - B158DRAFT_1062 0.18 -0.4 1,103,462 - B158DRAFT_1062 0.18 +1.1 1,103,476 + B158DRAFT_1062 0.20 -0.8 1,103,476 + B158DRAFT_1062 0.20 -0.8 1,103,484 - B158DRAFT_1062 0.21 -0.5 1,103,484 - B158DRAFT_1062 0.21 +0.3 1,103,517 - B158DRAFT_1062 0.25 -0.2 1,103,519 + B158DRAFT_1062 0.26 -0.2 1,103,539 + B158DRAFT_1062 0.28 -0.2 1,103,565 + B158DRAFT_1062 0.32 -0.5 1,103,573 + B158DRAFT_1062 0.33 -0.1 1,103,610 + B158DRAFT_1062 0.38 -0.4 1,103,674 + B158DRAFT_1062 0.47 -0.2 1,103,690 + B158DRAFT_1062 0.49 -0.1 1,103,690 + B158DRAFT_1062 0.49 +0.0 1,103,690 + B158DRAFT_1062 0.49 +0.0 1,103,698 - B158DRAFT_1062 0.51 -0.4 1,103,698 - B158DRAFT_1062 0.51 -0.5 1,103,702 + B158DRAFT_1062 0.51 -0.3 1,103,702 + B158DRAFT_1062 0.51 +0.0 1,103,710 - B158DRAFT_1062 0.52 -0.6 1,103,716 - B158DRAFT_1062 0.53 +2.9 1,103,770 + B158DRAFT_1062 0.61 -0.3 1,103,770 + B158DRAFT_1062 0.61 -0.1 1,103,770 + B158DRAFT_1062 0.61 -1.7 1,103,770 + B158DRAFT_1062 0.61 +0.2 1,103,778 - B158DRAFT_1062 0.62 -0.2 1,103,859 + B158DRAFT_1062 0.73 -0.2 1,103,883 + B158DRAFT_1062 0.76 +0.5 1,103,883 + B158DRAFT_1062 0.76 -0.3 1,103,891 - B158DRAFT_1062 0.77 +0.5 1,103,905 + B158DRAFT_1062 0.79 +0.0 1,103,906 - B158DRAFT_1062 0.79 -0.8 1,103,935 - B158DRAFT_1062 0.83 -1.3 1,103,953 - B158DRAFT_1062 0.86 -0.9 1,103,999 + -1.1 1,104,143 - B158DRAFT_1063 0.17 +1.1 1,104,143 - B158DRAFT_1063 0.17 -0.2
Or see this region's nucleotide sequence