Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1058

Experiment: m.b. Carbenicillin 0.005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1057 and B158DRAFT_1058 overlap by 14 nucleotidesB158DRAFT_1058 and B158DRAFT_1059 are separated by 1 nucleotides B158DRAFT_1057: B158DRAFT_1057 - TIGR01620 family protein, at 1,097,679 to 1,098,761 _1057 B158DRAFT_1058: B158DRAFT_1058 - ABC-type Na+ transport system, ATPase component, at 1,098,748 to 1,099,545 _1058 B158DRAFT_1059: B158DRAFT_1059 - ABC-type Na+ efflux pump, permease component, at 1,099,547 to 1,100,791 _1059 Position (kb) 1098 1099 1100Strain fitness (log2 ratio) -1 0 1at 1097.926 kb on - strand, within B158DRAFT_1057at 1097.989 kb on + strand, within B158DRAFT_1057at 1098.029 kb on - strand, within B158DRAFT_1057at 1098.076 kb on + strand, within B158DRAFT_1057at 1098.111 kb on - strand, within B158DRAFT_1057at 1098.259 kb on - strand, within B158DRAFT_1057at 1098.291 kb on - strand, within B158DRAFT_1057at 1098.399 kb on + strand, within B158DRAFT_1057at 1098.407 kb on - strand, within B158DRAFT_1057at 1098.407 kb on - strand, within B158DRAFT_1057at 1098.428 kb on - strand, within B158DRAFT_1057at 1098.537 kb on - strand, within B158DRAFT_1057at 1098.537 kb on - strand, within B158DRAFT_1057at 1098.611 kb on + strand, within B158DRAFT_1057at 1098.611 kb on + strand, within B158DRAFT_1057at 1098.611 kb on + strand, within B158DRAFT_1057at 1098.619 kb on - strand, within B158DRAFT_1057at 1098.823 kb on - strandat 1098.848 kb on - strand, within B158DRAFT_1058at 1098.850 kb on + strand, within B158DRAFT_1058at 1098.889 kb on - strand, within B158DRAFT_1058at 1098.889 kb on - strand, within B158DRAFT_1058at 1098.959 kb on - strand, within B158DRAFT_1058at 1099.054 kb on + strand, within B158DRAFT_1058at 1099.076 kb on + strand, within B158DRAFT_1058at 1099.179 kb on + strand, within B158DRAFT_1058at 1099.263 kb on + strand, within B158DRAFT_1058at 1099.268 kb on + strand, within B158DRAFT_1058at 1099.270 kb on + strand, within B158DRAFT_1058at 1099.351 kb on - strand, within B158DRAFT_1058at 1099.483 kb on + strandat 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.725 kb on + strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.733 kb on - strand, within B158DRAFT_1059at 1099.991 kb on + strand, within B158DRAFT_1059at 1100.026 kb on + strand, within B158DRAFT_1059at 1100.034 kb on - strand, within B158DRAFT_1059at 1100.034 kb on - strand, within B158DRAFT_1059at 1100.155 kb on + strand, within B158DRAFT_1059at 1100.473 kb on - strand, within B158DRAFT_1059at 1100.531 kb on + strand, within B158DRAFT_1059at 1100.539 kb on - strand, within B158DRAFT_1059at 1100.544 kb on - strand, within B158DRAFT_1059

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.005 mg/ml
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1,097,926 - B158DRAFT_1057 0.23 -0.2
1,097,989 + B158DRAFT_1057 0.29 -0.0
1,098,029 - B158DRAFT_1057 0.32 -0.1
1,098,076 + B158DRAFT_1057 0.37 -0.9
1,098,111 - B158DRAFT_1057 0.40 +0.1
1,098,259 - B158DRAFT_1057 0.54 -0.3
1,098,291 - B158DRAFT_1057 0.57 +0.4
1,098,399 + B158DRAFT_1057 0.66 -0.3
1,098,407 - B158DRAFT_1057 0.67 -0.0
1,098,407 - B158DRAFT_1057 0.67 -0.2
1,098,428 - B158DRAFT_1057 0.69 -0.1
1,098,537 - B158DRAFT_1057 0.79 -0.4
1,098,537 - B158DRAFT_1057 0.79 -0.2
1,098,611 + B158DRAFT_1057 0.86 -0.1
1,098,611 + B158DRAFT_1057 0.86 +0.4
1,098,611 + B158DRAFT_1057 0.86 +0.2
1,098,619 - B158DRAFT_1057 0.87 +0.4
1,098,823 - +0.4
1,098,848 - B158DRAFT_1058 0.13 -0.2
1,098,850 + B158DRAFT_1058 0.13 -0.0
1,098,889 - B158DRAFT_1058 0.18 -0.0
1,098,889 - B158DRAFT_1058 0.18 +0.1
1,098,959 - B158DRAFT_1058 0.26 +0.7
1,099,054 + B158DRAFT_1058 0.38 +0.5
1,099,076 + B158DRAFT_1058 0.41 +1.2
1,099,179 + B158DRAFT_1058 0.54 +0.0
1,099,263 + B158DRAFT_1058 0.65 +0.3
1,099,268 + B158DRAFT_1058 0.65 +0.2
1,099,270 + B158DRAFT_1058 0.65 -0.1
1,099,351 - B158DRAFT_1058 0.76 -0.1
1,099,483 + +0.5
1,099,725 + B158DRAFT_1059 0.14 -0.3
1,099,725 + B158DRAFT_1059 0.14 -0.6
1,099,725 + B158DRAFT_1059 0.14 +0.1
1,099,725 + B158DRAFT_1059 0.14 +0.0
1,099,725 + B158DRAFT_1059 0.14 +0.2
1,099,725 + B158DRAFT_1059 0.14 +0.1
1,099,733 - B158DRAFT_1059 0.15 +0.2
1,099,733 - B158DRAFT_1059 0.15 +0.2
1,099,733 - B158DRAFT_1059 0.15 +0.1
1,099,733 - B158DRAFT_1059 0.15 +0.3
1,099,733 - B158DRAFT_1059 0.15 +1.3
1,099,991 + B158DRAFT_1059 0.36 +0.4
1,100,026 + B158DRAFT_1059 0.38 -0.3
1,100,034 - B158DRAFT_1059 0.39 +0.7
1,100,034 - B158DRAFT_1059 0.39 +0.1
1,100,155 + B158DRAFT_1059 0.49 +0.2
1,100,473 - B158DRAFT_1059 0.74 -0.4
1,100,531 + B158DRAFT_1059 0.79 +0.2
1,100,539 - B158DRAFT_1059 0.80 +0.1
1,100,544 - B158DRAFT_1059 0.80 +0.1

Or see this region's nucleotide sequence