Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_756

Experiment: Vancomycin 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_755 and PfGW456L13_756 are separated by 165 nucleotidesPfGW456L13_756 and PfGW456L13_757 are separated by 121 nucleotides PfGW456L13_755 - Phosphate transport system permease protein PstA (TC 3.A.1.7.1), at 859,952 to 861,622 _755 PfGW456L13_756 - Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1), at 861,788 to 862,621 _756 PfGW456L13_757 - Phosphate transport system regulatory protein PhoU, at 862,743 to 863,504 _757 Position (kb) 861 862 863Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 860.945 kb on + strand, within PfGW456L13_755at 860.945 kb on + strand, within PfGW456L13_755at 860.945 kb on + strand, within PfGW456L13_755at 860.945 kb on + strand, within PfGW456L13_755at 860.957 kb on + strand, within PfGW456L13_755at 861.062 kb on + strand, within PfGW456L13_755at 861.063 kb on - strand, within PfGW456L13_755at 861.063 kb on - strand, within PfGW456L13_755at 861.063 kb on - strand, within PfGW456L13_755at 861.378 kb on + strand, within PfGW456L13_755at 861.378 kb on + strand, within PfGW456L13_755at 861.412 kb on + strand, within PfGW456L13_755at 861.412 kb on + strand, within PfGW456L13_755at 861.412 kb on + strand, within PfGW456L13_755at 861.416 kb on + strand, within PfGW456L13_755at 861.417 kb on - strand, within PfGW456L13_755at 861.417 kb on - strand, within PfGW456L13_755at 861.417 kb on - strand, within PfGW456L13_755at 861.422 kb on + strand, within PfGW456L13_755at 861.422 kb on + strand, within PfGW456L13_755at 861.467 kb on + strandat 861.467 kb on + strandat 861.467 kb on + strandat 861.467 kb on + strandat 861.467 kb on + strandat 861.467 kb on + strandat 861.467 kb on + strandat 861.467 kb on + strandat 861.468 kb on - strandat 861.468 kb on - strandat 861.468 kb on - strandat 861.468 kb on - strandat 861.518 kb on + strandat 861.518 kb on + strandat 861.575 kb on + strandat 861.575 kb on + strandat 861.575 kb on + strandat 861.575 kb on + strandat 861.575 kb on + strandat 861.575 kb on + strandat 861.576 kb on - strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.602 kb on + strandat 861.603 kb on - strandat 861.603 kb on - strandat 861.617 kb on - strandat 861.633 kb on + strandat 861.633 kb on + strandat 861.634 kb on - strandat 861.660 kb on + strandat 861.660 kb on + strandat 861.660 kb on + strandat 861.660 kb on + strandat 861.661 kb on - strandat 861.713 kb on + strandat 861.805 kb on + strandat 861.806 kb on - strandat 861.905 kb on + strand, within PfGW456L13_756at 861.905 kb on + strand, within PfGW456L13_756at 861.926 kb on + strand, within PfGW456L13_756at 862.070 kb on + strand, within PfGW456L13_756at 862.085 kb on + strand, within PfGW456L13_756at 862.169 kb on + strand, within PfGW456L13_756at 862.368 kb on + strand, within PfGW456L13_756at 862.369 kb on - strand, within PfGW456L13_756at 862.369 kb on - strand, within PfGW456L13_756at 862.405 kb on + strand, within PfGW456L13_756at 862.405 kb on + strand, within PfGW456L13_756at 862.406 kb on - strand, within PfGW456L13_756at 862.437 kb on - strand, within PfGW456L13_756at 862.508 kb on + strand, within PfGW456L13_756at 862.509 kb on - strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.523 kb on + strand, within PfGW456L13_756at 862.598 kb on + strandat 862.598 kb on + strandat 862.619 kb on + strandat 862.619 kb on + strandat 862.619 kb on + strandat 862.620 kb on - strandat 862.639 kb on + strandat 862.639 kb on + strandat 862.640 kb on - strandat 862.640 kb on - strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.686 kb on + strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.687 kb on - strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.690 kb on + strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.691 kb on - strandat 862.748 kb on + strandat 862.748 kb on + strandat 862.751 kb on + strandat 862.751 kb on + strandat 863.391 kb on + strand, within PfGW456L13_757at 863.392 kb on - strand, within PfGW456L13_757at 863.392 kb on - strand, within PfGW456L13_757at 863.399 kb on - strand, within PfGW456L13_757at 863.498 kb on + strandat 863.498 kb on + strandat 863.498 kb on + strandat 863.498 kb on + strandat 863.498 kb on + strandat 863.499 kb on - strandat 863.499 kb on - strandat 863.499 kb on - strandat 863.499 kb on - strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.502 kb on + strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.503 kb on - strandat 863.516 kb on + strandat 863.517 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Vancomycin 0.125 mg/ml
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860,945 + PfGW456L13_755 0.59 +0.6
860,945 + PfGW456L13_755 0.59 -0.3
860,945 + PfGW456L13_755 0.59 +1.1
860,945 + PfGW456L13_755 0.59 -0.1
860,957 + PfGW456L13_755 0.60 +0.2
861,062 + PfGW456L13_755 0.66 -0.2
861,063 - PfGW456L13_755 0.66 +0.1
861,063 - PfGW456L13_755 0.66 -0.4
861,063 - PfGW456L13_755 0.66 -0.1
861,378 + PfGW456L13_755 0.85 +0.2
861,378 + PfGW456L13_755 0.85 -0.3
861,412 + PfGW456L13_755 0.87 +0.6
861,412 + PfGW456L13_755 0.87 +0.2
861,412 + PfGW456L13_755 0.87 +0.5
861,416 + PfGW456L13_755 0.88 +0.6
861,417 - PfGW456L13_755 0.88 -0.9
861,417 - PfGW456L13_755 0.88 +0.3
861,417 - PfGW456L13_755 0.88 +0.2
861,422 + PfGW456L13_755 0.88 +0.9
861,422 + PfGW456L13_755 0.88 +0.7
861,467 + -2.4
861,467 + +0.5
861,467 + -0.4
861,467 + -0.3
861,467 + +0.0
861,467 + -0.7
861,467 + +0.4
861,467 + -0.1
861,468 - -1.7
861,468 - -0.3
861,468 - -1.3
861,468 - -1.3
861,518 + -0.6
861,518 + +0.3
861,575 + +0.3
861,575 + +0.8
861,575 + +1.2
861,575 + +0.4
861,575 + -0.7
861,575 + -0.3
861,576 - -0.5
861,602 + -0.5
861,602 + +0.3
861,602 + -1.2
861,602 + +2.1
861,602 + +0.5
861,602 + +0.7
861,602 + -0.1
861,602 + +0.7
861,602 + -0.5
861,603 - -0.3
861,603 - -0.3
861,617 - +0.3
861,633 + -0.2
861,633 + +0.2
861,634 - +0.4
861,660 + +0.3
861,660 + +0.2
861,660 + -0.7
861,660 + -0.0
861,661 - +1.3
861,713 + -0.0
861,805 + +0.0
861,806 - -0.7
861,905 + PfGW456L13_756 0.14 -1.3
861,905 + PfGW456L13_756 0.14 -2.3
861,926 + PfGW456L13_756 0.17 -1.5
862,070 + PfGW456L13_756 0.34 -0.1
862,085 + PfGW456L13_756 0.36 -1.7
862,169 + PfGW456L13_756 0.46 -0.9
862,368 + PfGW456L13_756 0.70 -0.8
862,369 - PfGW456L13_756 0.70 -0.1
862,369 - PfGW456L13_756 0.70 -2.5
862,405 + PfGW456L13_756 0.74 +0.9
862,405 + PfGW456L13_756 0.74 +0.7
862,406 - PfGW456L13_756 0.74 -0.5
862,437 - PfGW456L13_756 0.78 -0.1
862,508 + PfGW456L13_756 0.86 -1.2
862,509 - PfGW456L13_756 0.86 -0.4
862,523 + PfGW456L13_756 0.88 -0.4
862,523 + PfGW456L13_756 0.88 -0.3
862,523 + PfGW456L13_756 0.88 +0.9
862,523 + PfGW456L13_756 0.88 +0.3
862,523 + PfGW456L13_756 0.88 +0.6
862,523 + PfGW456L13_756 0.88 +0.9
862,523 + PfGW456L13_756 0.88 -1.4
862,523 + PfGW456L13_756 0.88 -0.3
862,598 + -1.4
862,598 + +0.4
862,619 + -0.0
862,619 + -0.7
862,619 + +2.1
862,620 - +0.9
862,639 + -1.1
862,639 + +0.3
862,640 - -0.0
862,640 - -0.1
862,686 + -0.5
862,686 + -1.0
862,686 + -0.2
862,686 + -0.2
862,686 + -0.6
862,686 + -0.1
862,686 + -0.3
862,686 + +0.2
862,686 + +0.2
862,686 + +0.6
862,686 + +0.4
862,686 + +0.8
862,686 + -0.4
862,687 - +0.2
862,687 - -0.0
862,687 - -1.0
862,687 - -0.0
862,687 - +0.1
862,687 - -2.7
862,687 - -1.5
862,687 - -3.1
862,687 - -0.6
862,687 - -0.4
862,687 - -0.3
862,687 - +1.7
862,687 - +1.3
862,687 - -0.1
862,690 + +0.5
862,690 + -0.1
862,690 + -0.6
862,690 + +0.2
862,690 + -1.1
862,690 + -0.6
862,690 + +0.2
862,690 + +0.4
862,691 - -1.7
862,691 - +0.7
862,691 - -0.4
862,691 - -0.8
862,691 - -0.7
862,691 - +1.0
862,691 - -0.2
862,691 - -1.3
862,748 + +0.6
862,748 + +0.5
862,751 + -0.8
862,751 + +1.0
863,391 + PfGW456L13_757 0.85 +0.7
863,392 - PfGW456L13_757 0.85 +1.2
863,392 - PfGW456L13_757 0.85 -0.6
863,399 - PfGW456L13_757 0.86 +0.0
863,498 + -1.0
863,498 + -0.3
863,498 + -0.2
863,498 + +0.4
863,498 + -0.2
863,499 - +0.7
863,499 - +0.1
863,499 - -0.1
863,499 - +0.5
863,502 + +0.2
863,502 + +0.0
863,502 + -0.3
863,502 + +0.0
863,502 + +0.3
863,502 + +0.5
863,502 + +0.8
863,502 + +0.3
863,502 + -0.4
863,502 + +0.9
863,502 + -1.5
863,502 + -0.5
863,502 + -1.2
863,502 + +0.2
863,503 - -0.3
863,503 - +0.4
863,503 - +0.5
863,503 - -1.3
863,503 - -1.3
863,503 - +0.1
863,503 - -0.0
863,503 - -0.8
863,516 + +0.3
863,517 - -1.0

Or see this region's nucleotide sequence