Experiment: Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_755 and PfGW456L13_756 are separated by 165 nucleotides PfGW456L13_756 and PfGW456L13_757 are separated by 121 nucleotides
PfGW456L13_755 - Phosphate transport system permease protein PstA (TC 3.A.1.7.1), at 859,952 to 861,622
_755
PfGW456L13_756 - Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1), at 861,788 to 862,621
_756
PfGW456L13_757 - Phosphate transport system regulatory protein PhoU, at 862,743 to 863,504
_757
Position (kb)
861
862
863 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 860.945 kb on + strand, within PfGW456L13_755 at 860.945 kb on + strand, within PfGW456L13_755 at 860.945 kb on + strand, within PfGW456L13_755 at 860.945 kb on + strand, within PfGW456L13_755 at 860.957 kb on + strand, within PfGW456L13_755 at 861.062 kb on + strand, within PfGW456L13_755 at 861.063 kb on - strand, within PfGW456L13_755 at 861.063 kb on - strand, within PfGW456L13_755 at 861.063 kb on - strand, within PfGW456L13_755 at 861.378 kb on + strand, within PfGW456L13_755 at 861.378 kb on + strand, within PfGW456L13_755 at 861.412 kb on + strand, within PfGW456L13_755 at 861.412 kb on + strand, within PfGW456L13_755 at 861.412 kb on + strand, within PfGW456L13_755 at 861.416 kb on + strand, within PfGW456L13_755 at 861.417 kb on - strand, within PfGW456L13_755 at 861.417 kb on - strand, within PfGW456L13_755 at 861.417 kb on - strand, within PfGW456L13_755 at 861.422 kb on + strand, within PfGW456L13_755 at 861.422 kb on + strand, within PfGW456L13_755 at 861.467 kb on + strand at 861.467 kb on + strand at 861.467 kb on + strand at 861.467 kb on + strand at 861.467 kb on + strand at 861.467 kb on + strand at 861.467 kb on + strand at 861.467 kb on + strand at 861.468 kb on - strand at 861.468 kb on - strand at 861.468 kb on - strand at 861.468 kb on - strand at 861.518 kb on + strand at 861.518 kb on + strand at 861.575 kb on + strand at 861.575 kb on + strand at 861.575 kb on + strand at 861.575 kb on + strand at 861.575 kb on + strand at 861.575 kb on + strand at 861.576 kb on - strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.602 kb on + strand at 861.603 kb on - strand at 861.603 kb on - strand at 861.617 kb on - strand at 861.633 kb on + strand at 861.633 kb on + strand at 861.634 kb on - strand at 861.660 kb on + strand at 861.660 kb on + strand at 861.660 kb on + strand at 861.660 kb on + strand at 861.661 kb on - strand at 861.713 kb on + strand at 861.805 kb on + strand at 861.806 kb on - strand at 861.905 kb on + strand, within PfGW456L13_756 at 861.905 kb on + strand, within PfGW456L13_756 at 861.926 kb on + strand, within PfGW456L13_756 at 862.070 kb on + strand, within PfGW456L13_756 at 862.085 kb on + strand, within PfGW456L13_756 at 862.169 kb on + strand, within PfGW456L13_756 at 862.368 kb on + strand, within PfGW456L13_756 at 862.369 kb on - strand, within PfGW456L13_756 at 862.369 kb on - strand, within PfGW456L13_756 at 862.405 kb on + strand, within PfGW456L13_756 at 862.405 kb on + strand, within PfGW456L13_756 at 862.406 kb on - strand, within PfGW456L13_756 at 862.437 kb on - strand, within PfGW456L13_756 at 862.508 kb on + strand, within PfGW456L13_756 at 862.509 kb on - strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.523 kb on + strand, within PfGW456L13_756 at 862.598 kb on + strand at 862.598 kb on + strand at 862.619 kb on + strand at 862.619 kb on + strand at 862.619 kb on + strand at 862.620 kb on - strand at 862.639 kb on + strand at 862.639 kb on + strand at 862.640 kb on - strand at 862.640 kb on - strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.686 kb on + strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.687 kb on - strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.690 kb on + strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.691 kb on - strand at 862.748 kb on + strand at 862.748 kb on + strand at 862.751 kb on + strand at 862.751 kb on + strand at 863.391 kb on + strand, within PfGW456L13_757 at 863.392 kb on - strand, within PfGW456L13_757 at 863.392 kb on - strand, within PfGW456L13_757 at 863.399 kb on - strand, within PfGW456L13_757 at 863.498 kb on + strand at 863.498 kb on + strand at 863.498 kb on + strand at 863.498 kb on + strand at 863.498 kb on + strand at 863.499 kb on - strand at 863.499 kb on - strand at 863.499 kb on - strand at 863.499 kb on - strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.502 kb on + strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.503 kb on - strand at 863.516 kb on + strand at 863.517 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.125 mg/ml remove 860,945 + PfGW456L13_755 0.59 +0.6 860,945 + PfGW456L13_755 0.59 -0.3 860,945 + PfGW456L13_755 0.59 +1.1 860,945 + PfGW456L13_755 0.59 -0.1 860,957 + PfGW456L13_755 0.60 +0.2 861,062 + PfGW456L13_755 0.66 -0.2 861,063 - PfGW456L13_755 0.66 +0.1 861,063 - PfGW456L13_755 0.66 -0.4 861,063 - PfGW456L13_755 0.66 -0.1 861,378 + PfGW456L13_755 0.85 +0.2 861,378 + PfGW456L13_755 0.85 -0.3 861,412 + PfGW456L13_755 0.87 +0.6 861,412 + PfGW456L13_755 0.87 +0.2 861,412 + PfGW456L13_755 0.87 +0.5 861,416 + PfGW456L13_755 0.88 +0.6 861,417 - PfGW456L13_755 0.88 -0.9 861,417 - PfGW456L13_755 0.88 +0.3 861,417 - PfGW456L13_755 0.88 +0.2 861,422 + PfGW456L13_755 0.88 +0.9 861,422 + PfGW456L13_755 0.88 +0.7 861,467 + -2.4 861,467 + +0.5 861,467 + -0.4 861,467 + -0.3 861,467 + +0.0 861,467 + -0.7 861,467 + +0.4 861,467 + -0.1 861,468 - -1.7 861,468 - -0.3 861,468 - -1.3 861,468 - -1.3 861,518 + -0.6 861,518 + +0.3 861,575 + +0.3 861,575 + +0.8 861,575 + +1.2 861,575 + +0.4 861,575 + -0.7 861,575 + -0.3 861,576 - -0.5 861,602 + -0.5 861,602 + +0.3 861,602 + -1.2 861,602 + +2.1 861,602 + +0.5 861,602 + +0.7 861,602 + -0.1 861,602 + +0.7 861,602 + -0.5 861,603 - -0.3 861,603 - -0.3 861,617 - +0.3 861,633 + -0.2 861,633 + +0.2 861,634 - +0.4 861,660 + +0.3 861,660 + +0.2 861,660 + -0.7 861,660 + -0.0 861,661 - +1.3 861,713 + -0.0 861,805 + +0.0 861,806 - -0.7 861,905 + PfGW456L13_756 0.14 -1.3 861,905 + PfGW456L13_756 0.14 -2.3 861,926 + PfGW456L13_756 0.17 -1.5 862,070 + PfGW456L13_756 0.34 -0.1 862,085 + PfGW456L13_756 0.36 -1.7 862,169 + PfGW456L13_756 0.46 -0.9 862,368 + PfGW456L13_756 0.70 -0.8 862,369 - PfGW456L13_756 0.70 -0.1 862,369 - PfGW456L13_756 0.70 -2.5 862,405 + PfGW456L13_756 0.74 +0.9 862,405 + PfGW456L13_756 0.74 +0.7 862,406 - PfGW456L13_756 0.74 -0.5 862,437 - PfGW456L13_756 0.78 -0.1 862,508 + PfGW456L13_756 0.86 -1.2 862,509 - PfGW456L13_756 0.86 -0.4 862,523 + PfGW456L13_756 0.88 -0.4 862,523 + PfGW456L13_756 0.88 -0.3 862,523 + PfGW456L13_756 0.88 +0.9 862,523 + PfGW456L13_756 0.88 +0.3 862,523 + PfGW456L13_756 0.88 +0.6 862,523 + PfGW456L13_756 0.88 +0.9 862,523 + PfGW456L13_756 0.88 -1.4 862,523 + PfGW456L13_756 0.88 -0.3 862,598 + -1.4 862,598 + +0.4 862,619 + -0.0 862,619 + -0.7 862,619 + +2.1 862,620 - +0.9 862,639 + -1.1 862,639 + +0.3 862,640 - -0.0 862,640 - -0.1 862,686 + -0.5 862,686 + -1.0 862,686 + -0.2 862,686 + -0.2 862,686 + -0.6 862,686 + -0.1 862,686 + -0.3 862,686 + +0.2 862,686 + +0.2 862,686 + +0.6 862,686 + +0.4 862,686 + +0.8 862,686 + -0.4 862,687 - +0.2 862,687 - -0.0 862,687 - -1.0 862,687 - -0.0 862,687 - +0.1 862,687 - -2.7 862,687 - -1.5 862,687 - -3.1 862,687 - -0.6 862,687 - -0.4 862,687 - -0.3 862,687 - +1.7 862,687 - +1.3 862,687 - -0.1 862,690 + +0.5 862,690 + -0.1 862,690 + -0.6 862,690 + +0.2 862,690 + -1.1 862,690 + -0.6 862,690 + +0.2 862,690 + +0.4 862,691 - -1.7 862,691 - +0.7 862,691 - -0.4 862,691 - -0.8 862,691 - -0.7 862,691 - +1.0 862,691 - -0.2 862,691 - -1.3 862,748 + +0.6 862,748 + +0.5 862,751 + -0.8 862,751 + +1.0 863,391 + PfGW456L13_757 0.85 +0.7 863,392 - PfGW456L13_757 0.85 +1.2 863,392 - PfGW456L13_757 0.85 -0.6 863,399 - PfGW456L13_757 0.86 +0.0 863,498 + -1.0 863,498 + -0.3 863,498 + -0.2 863,498 + +0.4 863,498 + -0.2 863,499 - +0.7 863,499 - +0.1 863,499 - -0.1 863,499 - +0.5 863,502 + +0.2 863,502 + +0.0 863,502 + -0.3 863,502 + +0.0 863,502 + +0.3 863,502 + +0.5 863,502 + +0.8 863,502 + +0.3 863,502 + -0.4 863,502 + +0.9 863,502 + -1.5 863,502 + -0.5 863,502 + -1.2 863,502 + +0.2 863,503 - -0.3 863,503 - +0.4 863,503 - +0.5 863,503 - -1.3 863,503 - -1.3 863,503 - +0.1 863,503 - -0.0 863,503 - -0.8 863,516 + +0.3 863,517 - -1.0
Or see this region's nucleotide sequence