Experiment: Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_715 and PfGW456L13_716 are separated by 4 nucleotides PfGW456L13_716 and PfGW456L13_717 are separated by 26 nucleotides PfGW456L13_717 and PfGW456L13_718 overlap by 39 nucleotides PfGW456L13_718 and PfGW456L13_719 are separated by 126 nucleotides
PfGW456L13_715 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 811,943 to 812,914
_715
PfGW456L13_716 - FIG00957502: hypothetical protein, at 812,919 to 813,332
_716
PfGW456L13_717 - hypothetical protein, at 813,359 to 813,490
_717
PfGW456L13_718 - Pyridoxal kinase (EC 2.7.1.35), at 813,452 to 814,324
_718
PfGW456L13_719 - cytosolic long-chain acyl-CoA thioester hydrolase family protein, at 814,451 to 814,933
_719
Position (kb) 813
814 Strain fitness (log2 ratio) -2
-1
0
1
2 at 812.398 kb on - strand, within PfGW456L13_715 at 812.398 kb on - strand, within PfGW456L13_715 at 812.398 kb on - strand, within PfGW456L13_715 at 812.400 kb on + strand, within PfGW456L13_715 at 812.400 kb on + strand, within PfGW456L13_715 at 812.400 kb on + strand, within PfGW456L13_715 at 812.401 kb on - strand, within PfGW456L13_715 at 812.401 kb on - strand, within PfGW456L13_715 at 812.401 kb on - strand, within PfGW456L13_715 at 812.499 kb on + strand, within PfGW456L13_715 at 812.499 kb on + strand, within PfGW456L13_715 at 812.551 kb on + strand, within PfGW456L13_715 at 812.551 kb on + strand, within PfGW456L13_715 at 812.551 kb on + strand, within PfGW456L13_715 at 812.650 kb on + strand, within PfGW456L13_715 at 813.119 kb on + strand, within PfGW456L13_716 at 813.119 kb on + strand, within PfGW456L13_716 at 813.120 kb on - strand, within PfGW456L13_716 at 813.121 kb on + strand, within PfGW456L13_716 at 813.121 kb on + strand, within PfGW456L13_716 at 813.121 kb on + strand, within PfGW456L13_716 at 813.122 kb on - strand, within PfGW456L13_716 at 813.122 kb on - strand, within PfGW456L13_716 at 813.273 kb on + strand, within PfGW456L13_716 at 813.274 kb on - strand, within PfGW456L13_716 at 813.312 kb on + strand at 813.313 kb on - strand at 813.313 kb on - strand at 813.313 kb on - strand at 813.313 kb on - strand at 813.313 kb on - strand at 813.313 kb on - strand at 813.314 kb on + strand at 813.314 kb on + strand at 813.314 kb on + strand at 813.314 kb on + strand at 813.314 kb on + strand at 813.315 kb on - strand at 813.315 kb on - strand at 813.315 kb on - strand at 813.315 kb on - strand at 813.315 kb on - strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.354 kb on + strand at 813.355 kb on - strand at 813.355 kb on - strand at 813.355 kb on - strand at 813.355 kb on - strand at 813.355 kb on - strand at 813.355 kb on - strand at 813.355 kb on - strand at 813.365 kb on + strand at 813.365 kb on + strand at 813.366 kb on - strand at 813.366 kb on - strand at 813.366 kb on - strand at 813.366 kb on - strand at 813.366 kb on - strand at 813.366 kb on - strand at 813.400 kb on + strand, within PfGW456L13_717 at 813.401 kb on - strand, within PfGW456L13_717 at 813.408 kb on + strand, within PfGW456L13_717 at 813.460 kb on + strand at 813.460 kb on + strand at 813.460 kb on + strand at 813.461 kb on - strand at 813.495 kb on + strand at 813.496 kb on - strand at 813.597 kb on - strand, within PfGW456L13_718 at 813.597 kb on - strand, within PfGW456L13_718 at 813.637 kb on - strand, within PfGW456L13_718 at 813.637 kb on - strand, within PfGW456L13_718 at 813.637 kb on - strand, within PfGW456L13_718 at 813.782 kb on + strand, within PfGW456L13_718 at 813.782 kb on + strand, within PfGW456L13_718 at 813.783 kb on - strand, within PfGW456L13_718 at 813.783 kb on - strand, within PfGW456L13_718 at 813.783 kb on - strand, within PfGW456L13_718 at 813.783 kb on - strand, within PfGW456L13_718 at 814.244 kb on + strand at 814.244 kb on + strand at 814.244 kb on + strand at 814.244 kb on + strand at 814.373 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.380 kb on + strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.381 kb on - strand at 814.421 kb on + strand at 814.422 kb on - strand at 814.422 kb on - strand at 814.422 kb on - strand at 814.477 kb on - strand at 814.477 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.125 mg/ml remove 812,398 - PfGW456L13_715 0.47 +1.2 812,398 - PfGW456L13_715 0.47 +0.2 812,398 - PfGW456L13_715 0.47 +0.1 812,400 + PfGW456L13_715 0.47 +0.8 812,400 + PfGW456L13_715 0.47 -0.2 812,400 + PfGW456L13_715 0.47 +0.0 812,401 - PfGW456L13_715 0.47 +0.6 812,401 - PfGW456L13_715 0.47 +0.4 812,401 - PfGW456L13_715 0.47 -0.1 812,499 + PfGW456L13_715 0.57 +0.5 812,499 + PfGW456L13_715 0.57 +0.4 812,551 + PfGW456L13_715 0.63 -0.6 812,551 + PfGW456L13_715 0.63 -0.2 812,551 + PfGW456L13_715 0.63 +0.2 812,650 + PfGW456L13_715 0.73 +1.9 813,119 + PfGW456L13_716 0.48 -0.7 813,119 + PfGW456L13_716 0.48 -0.1 813,120 - PfGW456L13_716 0.49 +0.3 813,121 + PfGW456L13_716 0.49 +0.1 813,121 + PfGW456L13_716 0.49 -0.2 813,121 + PfGW456L13_716 0.49 -1.1 813,122 - PfGW456L13_716 0.49 +0.1 813,122 - PfGW456L13_716 0.49 +0.5 813,273 + PfGW456L13_716 0.86 -0.3 813,274 - PfGW456L13_716 0.86 +0.6 813,312 + -0.4 813,313 - +0.3 813,313 - -0.0 813,313 - +1.1 813,313 - +0.0 813,313 - -0.3 813,313 - -1.2 813,314 + -0.7 813,314 + -0.4 813,314 + +0.1 813,314 + +0.9 813,314 + -0.1 813,315 - -0.4 813,315 - -0.2 813,315 - -0.1 813,315 - -0.7 813,315 - -0.8 813,354 + +0.6 813,354 + -0.7 813,354 + -0.2 813,354 + +0.7 813,354 + +0.4 813,354 + +1.3 813,354 + -0.8 813,354 + -0.3 813,355 - +0.6 813,355 - -0.7 813,355 - -1.8 813,355 - -0.1 813,355 - -0.2 813,355 - -1.7 813,355 - -0.3 813,365 + +0.1 813,365 + +0.3 813,366 - +0.1 813,366 - +0.4 813,366 - +0.0 813,366 - +0.1 813,366 - -0.5 813,366 - +0.5 813,400 + PfGW456L13_717 0.31 +0.1 813,401 - PfGW456L13_717 0.32 -0.7 813,408 + PfGW456L13_717 0.37 -1.0 813,460 + +0.4 813,460 + +1.1 813,460 + +0.3 813,461 - -0.6 813,495 + -0.3 813,496 - +0.6 813,597 - PfGW456L13_718 0.17 -0.1 813,597 - PfGW456L13_718 0.17 +0.4 813,637 - PfGW456L13_718 0.21 -0.1 813,637 - PfGW456L13_718 0.21 +0.3 813,637 - PfGW456L13_718 0.21 +0.3 813,782 + PfGW456L13_718 0.38 -0.1 813,782 + PfGW456L13_718 0.38 +0.1 813,783 - PfGW456L13_718 0.38 -0.7 813,783 - PfGW456L13_718 0.38 -0.2 813,783 - PfGW456L13_718 0.38 -0.1 813,783 - PfGW456L13_718 0.38 +0.4 814,244 + +0.5 814,244 + -2.4 814,244 + -0.8 814,244 + -0.4 814,373 + -0.5 814,380 + +0.2 814,380 + -2.0 814,380 + -0.1 814,380 + +0.9 814,380 + +0.2 814,380 + -0.1 814,380 + +0.1 814,380 + +0.1 814,380 + -0.5 814,380 + -0.1 814,380 + -1.5 814,380 + +0.2 814,380 + +2.3 814,380 + -0.6 814,380 + +0.4 814,381 - -0.1 814,381 - +0.1 814,381 - -0.5 814,381 - +1.5 814,381 - +0.4 814,381 - -0.6 814,381 - -0.7 814,381 - +0.1 814,381 - +0.1 814,381 - -0.1 814,381 - -0.4 814,381 - +0.4 814,381 - -0.1 814,421 + -0.1 814,422 - +0.3 814,422 - -0.1 814,422 - -0.2 814,477 - -0.4 814,477 - +0.5
Or see this region's nucleotide sequence