Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_5060

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
5,640,870	+		PfGW456L13_5058	0.83	-0.8
5,641,005	-				-0.1
5,641,139	+				+0.8
5,641,139	+				+0.6
5,641,140	-				-0.6
5,641,140	-				-0.0
5,641,140	-				+0.2
5,641,148	+				-0.9
5,641,148	+				+0.8
5,641,148	+				+0.6
5,641,148	+				+0.7
5,641,149	-				+0.0
5,641,149	-				+0.0
5,641,149	-				-0.6
5,641,149	-				+0.1
5,641,149	-				+0.2
5,641,149	-				+0.1
5,641,152	+				-0.8
5,641,152	+				+0.7
5,641,153	-				-0.5
5,641,199	-				-0.1
5,641,199	-				-0.6
5,641,199	-				+0.2
5,641,224	+				-0.2
5,641,224	+				+0.2
5,641,225	-				+0.8
5,641,225	-				+0.6
5,641,225	-				-0.2
5,641,233	+				-0.4
5,641,234	-				+0.2
5,641,234	-				-0.6
5,641,234	-				+0.6
5,641,402	+		PfGW456L13_5059	0.67	-0.9
5,641,403	-		PfGW456L13_5059	0.67	+0.9
5,641,463	+				+0.7
5,641,463	+				+0.5
5,641,463	+				+0.5
5,641,463	+				-0.1
5,641,464	-				+0.6
5,641,464	-				+0.0
5,641,464	-				+0.8
5,641,464	-				+1.3
5,641,536	+				-0.3
5,641,537	-				-0.2
5,641,571	+				+0.6
5,641,572	-				-1.1
5,641,572	-				-1.0
5,641,616	+				+0.1
5,641,617	-				-0.2
5,641,638	+				-0.5
5,641,639	-				-0.3
5,641,685	-				+0.3
5,641,708	+				+0.0
5,641,712	+				-1.8
5,641,712	+				+1.1
5,641,712	+				+0.2
5,641,712	+				-1.2
5,641,712	+				-0.2
5,641,712	+				-0.1
5,641,712	+				+1.0
5,641,712	+				-0.4
5,641,712	+				+0.0
5,641,713	-				+0.8
5,641,713	-				-0.2
5,641,713	-				-0.7
5,641,713	-				-0.7
5,641,713	-				+0.6
5,641,713	-				+0.0
5,641,713	-				+2.2
5,641,713	-				-1.2
5,641,713	-				+0.9
5,641,826	+				+0.9
5,641,827	-				+0.1
5,641,911	-				-1.7
5,642,013	-		PfGW456L13_5060	0.12	-1.8
5,642,048	+		PfGW456L13_5060	0.14	-0.9
5,642,049	-		PfGW456L13_5060	0.14	-1.4
5,642,049	-		PfGW456L13_5060	0.14	-1.0
5,642,049	-		PfGW456L13_5060	0.14	-2.9
5,642,049	-		PfGW456L13_5060	0.14	-0.8
5,642,461	-		PfGW456L13_5060	0.40	+0.4
5,642,849	+		PfGW456L13_5060	0.65	-1.2
5,642,849	+		PfGW456L13_5060	0.65	-1.2
5,642,850	-		PfGW456L13_5060	0.65	-1.8
5,642,850	-		PfGW456L13_5060	0.65	-2.0
5,642,850	-		PfGW456L13_5060	0.65	-2.0
5,642,850	-		PfGW456L13_5060	0.65	+0.8
5,642,868	-		PfGW456L13_5060	0.66	-2.2
5,643,067	-		PfGW456L13_5060	0.78	-1.8
5,643,116	+		PfGW456L13_5060	0.82	-1.5
5,643,116	+		PfGW456L13_5060	0.82	-0.5
5,643,116	+		PfGW456L13_5060	0.82	-2.0
5,643,116	+		PfGW456L13_5060	0.82	-0.8
5,643,117	-		PfGW456L13_5060	0.82	-1.8
5,643,120	+		PfGW456L13_5060	0.82	-2.5
5,643,120	+		PfGW456L13_5060	0.82	-2.2
5,643,361	-				-0.2
5,643,449	+				-1.5
5,643,450	-				+0.2
5,643,528	-				+1.2
5,643,642	+		PfGW456L13_5061	0.46	-1.5
5,643,643	-		PfGW456L13_5061	0.46	-1.2
5,643,676	+		PfGW456L13_5061	0.60	+1.1
5,643,677	-		PfGW456L13_5061	0.60	-1.2
5,643,696	+		PfGW456L13_5061	0.67	+0.0
5,643,697	-		PfGW456L13_5061	0.68	+0.8
5,643,736	+		PfGW456L13_5061	0.83	+0.3
5,643,736	+		PfGW456L13_5061	0.83	-0.6
5,643,736	+		PfGW456L13_5061	0.83	+0.2
5,643,736	+		PfGW456L13_5061	0.83	-0.4
5,643,736	+		PfGW456L13_5061	0.83	-0.4
5,643,737	-		PfGW456L13_5061	0.84	+0.2
5,643,737	-		PfGW456L13_5061	0.84	+0.5
5,643,737	-				-0.8
5,643,737	-		PfGW456L13_5061	0.84	+0.3
5,643,859	+				-0.2
5,643,875	+				-0.2
5,643,890	+				-0.7
5,643,947	-		PfGW456L13_5062	0.14	-0.1
5,644,222	+		PfGW456L13_5062	0.52	+0.5
5,644,222	+		PfGW456L13_5062	0.52	+0.8
5,644,223	-		PfGW456L13_5062	0.52	-1.0
5,644,223	-		PfGW456L13_5062	0.52	-0.1
5,644,223	-		PfGW456L13_5062	0.52	+1.4
5,644,223	-		PfGW456L13_5062	0.52	-0.0