Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4580

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
5,108,547	+				+0.2
5,108,547	+				+0.4
5,108,595	+				+1.3
5,108,596	-				+0.1
5,108,729	+		PfGW456L13_4579	0.19	+0.6
5,108,729	+		PfGW456L13_4579	0.19	+1.3
5,108,729	+		PfGW456L13_4579	0.19	+0.7
5,108,729	+		PfGW456L13_4579	0.19	+0.7
5,108,730	-		PfGW456L13_4579	0.19	+0.9
5,108,730	-		PfGW456L13_4579	0.19	+0.9
5,108,730	-		PfGW456L13_4579	0.19	+1.1
5,108,730	-		PfGW456L13_4579	0.19	-0.8
5,108,730	-		PfGW456L13_4579	0.19	-0.9
5,108,730	-		PfGW456L13_4579	0.19	+0.1
5,108,730	-		PfGW456L13_4579	0.19	-1.1
5,108,730	-		PfGW456L13_4579	0.19	-0.7
5,108,730	-		PfGW456L13_4579	0.19	+1.2
5,108,730	-		PfGW456L13_4579	0.19	+1.0
5,108,730	-		PfGW456L13_4579	0.19	-1.9
5,108,730	-		PfGW456L13_4579	0.19	+0.0
5,108,731	+		PfGW456L13_4579	0.20	-0.5
5,108,731	+		PfGW456L13_4579	0.20	+0.9
5,108,731	+		PfGW456L13_4579	0.20	+0.7
5,108,731	+		PfGW456L13_4579	0.20	-0.3
5,108,731	+		PfGW456L13_4579	0.20	+0.7
5,108,731	+		PfGW456L13_4579	0.20	+1.1
5,108,731	+		PfGW456L13_4579	0.20	-0.5
5,108,731	+		PfGW456L13_4579	0.20	-0.1
5,108,732	-		PfGW456L13_4579	0.20	+0.3
5,108,732	-		PfGW456L13_4579	0.20	+0.3
5,108,732	-		PfGW456L13_4579	0.20	+0.3
5,108,732	-		PfGW456L13_4579	0.20	-0.6
5,108,732	-		PfGW456L13_4579	0.20	+0.7
5,108,732	-		PfGW456L13_4579	0.20	+0.1
5,108,732	-		PfGW456L13_4579	0.20	+0.0
5,108,732	-		PfGW456L13_4579	0.20	-0.5
5,108,732	-		PfGW456L13_4579	0.20	+0.2
5,108,732	-		PfGW456L13_4579	0.20	+0.4
5,108,732	-		PfGW456L13_4579	0.20	+0.5
5,108,732	-		PfGW456L13_4579	0.20	-0.1
5,108,732	-		PfGW456L13_4579	0.20	+0.7
5,108,802	-		PfGW456L13_4579	0.31	+1.4
5,108,802	-		PfGW456L13_4579	0.31	+1.4
5,108,895	-		PfGW456L13_4579	0.45	-1.1
5,109,094	+		PfGW456L13_4579	0.77	-0.1
5,109,094	+		PfGW456L13_4579	0.77	+1.0
5,109,094	+		PfGW456L13_4579	0.77	-0.1
5,109,095	-		PfGW456L13_4579	0.77	+0.6
5,109,095	-		PfGW456L13_4579	0.77	+0.1
5,109,227	+				+0.3
5,109,245	+				-0.1
5,109,245	+				+0.4
5,109,246	-				+0.5
5,109,246	-				-0.3
5,109,246	-				+1.0
5,109,246	-				-0.1
5,109,246	-				+0.3
5,109,246	-				-0.5
5,109,246	-				-0.9
5,109,246	-				-0.6
5,109,246	-				+1.3
5,109,246	-				+0.1
5,109,246	-				-1.0
5,109,292	+				+0.5
5,109,293	-				-0.5
5,109,332	+				+0.2
5,109,333	-				+0.4
5,109,398	-				+0.1
5,109,415	+				-0.1
5,109,415	+				+1.5
5,109,415	+				+0.4
5,109,415	+				+0.0
5,109,416	-				-0.7
5,109,440	+				+0.4
5,109,441	-				-1.3
5,109,441	-				-0.5
5,109,444	+				+1.5
5,109,483	-				-0.7
5,109,483	-				-0.9
5,109,483	-				-3.0
5,109,685	+		PfGW456L13_4580	0.14	-1.9
5,109,788	+		PfGW456L13_4580	0.23	-0.9
5,109,809	+		PfGW456L13_4580	0.25	-2.6
5,109,810	-		PfGW456L13_4580	0.25	-0.6
5,109,810	-		PfGW456L13_4580	0.25	-1.8
5,109,915	-		PfGW456L13_4580	0.34	-0.8
5,109,915	-		PfGW456L13_4580	0.34	-1.4
5,109,983	+		PfGW456L13_4580	0.40	-1.3
5,109,995	+		PfGW456L13_4580	0.41	-0.9
5,109,995	+		PfGW456L13_4580	0.41	+0.4
5,109,995	+		PfGW456L13_4580	0.41	-1.1
5,109,995	+		PfGW456L13_4580	0.41	-0.6
5,109,995	+		PfGW456L13_4580	0.41	-1.1
5,110,103	+		PfGW456L13_4580	0.51	+2.7
5,110,104	-		PfGW456L13_4580	0.51	-1.4
5,110,104	-		PfGW456L13_4580	0.51	-0.3
5,110,104	-		PfGW456L13_4580	0.51	-2.3
5,110,229	+		PfGW456L13_4580	0.61	-1.5
5,110,230	-		PfGW456L13_4580	0.61	-0.3
5,110,345	-		PfGW456L13_4580	0.71	-1.1
5,110,611	+				-0.1
5,110,612	-				+0.1
5,110,641	+				-0.2
5,110,641	+				-0.4
5,110,641	+				+0.2
5,110,641	+				-1.8
5,110,642	-				-1.0
5,110,642	-				-1.1
5,110,673	+				-0.4
5,110,673	+				-0.2
5,110,673	+				-3.3
5,110,674	-				+1.4
5,110,719	+				-0.3
5,110,719	+				+0.1
5,110,720	-				-0.1
5,110,907	+				-0.7
5,110,907	+				-2.1
5,110,907	+				-0.9
5,110,907	+				-1.0
5,110,908	-				-0.5
5,110,924	+				-0.6
5,110,924	+				-1.6
5,110,924	+				-0.5
5,111,056	+		PfGW456L13_4581	0.12	+0.4
5,111,057	-		PfGW456L13_4581	0.12	+0.4
5,111,057	-		PfGW456L13_4581	0.12	-1.3
5,111,057	-		PfGW456L13_4581	0.12	-2.3
5,111,057	-		PfGW456L13_4581	0.12	+0.2
5,111,147	+		PfGW456L13_4581	0.15	-0.6
5,111,147	+		PfGW456L13_4581	0.15	+0.0
5,111,147	+		PfGW456L13_4581	0.15	-1.6
5,111,148	-		PfGW456L13_4581	0.15	+0.3
5,111,148	-		PfGW456L13_4581	0.15	-0.1
5,111,148	-		PfGW456L13_4581	0.15	+0.7
5,111,148	-		PfGW456L13_4581	0.15	-0.5
5,111,148	-		PfGW456L13_4581	0.15	-1.3
5,111,148	-		PfGW456L13_4581	0.15	-0.3
5,111,148	-		PfGW456L13_4581	0.15	-0.2
5,111,222	+		PfGW456L13_4581	0.17	-0.3
5,111,501	+		PfGW456L13_4581	0.26	-1.3
5,111,501	+		PfGW456L13_4581	0.26	-1.1
5,111,501	+		PfGW456L13_4581	0.26	-0.3
5,111,501	+		PfGW456L13_4581	0.26	-1.3
5,111,501	+		PfGW456L13_4581	0.26	-3.3
5,111,501	+		PfGW456L13_4581	0.26	+0.2
5,111,502	-		PfGW456L13_4581	0.26	+0.3
5,111,502	-		PfGW456L13_4581	0.26	-1.5
5,111,658	-		PfGW456L13_4581	0.31	-1.2