Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4400

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
4,913,496	+		PfGW456L13_4398	0.85	+0.7
4,913,626	+				-1.3
4,913,626	+				+0.4
4,913,626	+				+1.0
4,913,626	+				-0.3
4,913,627	-				+0.7
4,913,627	-				-0.3
4,913,627	-				+0.2
4,913,627	-				-0.4
4,913,628	+				-0.2
4,913,628	+				+1.6
4,913,628	+				+0.0
4,913,629	-				+0.4
4,913,629	-				+0.4
4,913,629	-				+0.4
4,913,629	-				-2.2
4,913,629	-				-0.8
4,913,677	-				-0.9
4,914,129	+				-1.3
4,914,129	+				+0.3
4,914,129	+				+0.1
4,914,129	+				-0.3
4,914,129	+				+0.4
4,914,130	-				-0.9
4,914,130	-				-0.2
4,914,130	-				+0.7
4,914,130	-				-3.4
4,914,263	+				+0.2
4,914,263	+				-0.8
4,914,263	+				+0.8
4,914,264	-				+0.2
4,914,264	-				-0.5
4,914,264	-				+0.6
4,914,264	-				+1.0
4,914,329	+				-0.4
4,914,329	+				-0.0
4,914,330	-				-0.2
4,914,330	-				+0.5
4,914,392	+				-1.9
4,914,432	-				-0.9
4,914,484	+		PfGW456L13_4400	0.11	-1.1
4,914,485	-		PfGW456L13_4400	0.11	-1.1
4,914,503	+		PfGW456L13_4400	0.12	-0.3
4,914,503	+		PfGW456L13_4400	0.12	-1.0
4,914,503	+		PfGW456L13_4400	0.12	-0.7
4,914,503	+		PfGW456L13_4400	0.12	-2.5
4,914,503	+		PfGW456L13_4400	0.12	-0.3
4,914,503	+		PfGW456L13_4400	0.12	-0.8
4,914,503	+		PfGW456L13_4400	0.12	-1.3
4,914,503	+		PfGW456L13_4400	0.12	-0.5
4,914,503	+		PfGW456L13_4400	0.12	-1.5
4,914,503	+		PfGW456L13_4400	0.12	+0.3
4,914,503	+		PfGW456L13_4400	0.12	-1.2
4,914,503	+		PfGW456L13_4400	0.12	-2.0
4,914,503	+		PfGW456L13_4400	0.12	+0.7
4,914,504	-		PfGW456L13_4400	0.12	-1.1
4,914,504	-		PfGW456L13_4400	0.12	-0.6
4,914,504	-		PfGW456L13_4400	0.12	-0.9
4,914,504	-		PfGW456L13_4400	0.12	-1.7
4,914,504	-		PfGW456L13_4400	0.12	-0.3
4,914,504	-		PfGW456L13_4400	0.12	-1.0
4,914,504	-		PfGW456L13_4400	0.12	-1.0
4,914,504	-		PfGW456L13_4400	0.12	-0.1
4,914,504	-		PfGW456L13_4400	0.12	-1.0
4,914,504	-		PfGW456L13_4400	0.12	-1.9
4,914,588	-		PfGW456L13_4400	0.18	-1.1
4,914,588	-		PfGW456L13_4400	0.18	-0.5
4,914,668	+		PfGW456L13_4400	0.24	-1.5
4,914,680	-		PfGW456L13_4400	0.25	-0.8
4,914,680	-		PfGW456L13_4400	0.25	+0.1
4,914,809	+		PfGW456L13_4400	0.34	-0.1
4,914,809	+		PfGW456L13_4400	0.34	-0.3
4,914,809	+		PfGW456L13_4400	0.34	-1.1
4,914,809	+		PfGW456L13_4400	0.34	-1.5
4,914,809	+		PfGW456L13_4400	0.34	-0.1
4,914,809	+		PfGW456L13_4400	0.34	-1.6
4,914,810	-		PfGW456L13_4400	0.34	-1.5
4,914,810	-		PfGW456L13_4400	0.34	+0.2
4,914,810	-		PfGW456L13_4400	0.34	-0.7
4,914,824	+		PfGW456L13_4400	0.35	-1.3
4,914,825	-		PfGW456L13_4400	0.35	-1.4
4,914,825	-		PfGW456L13_4400	0.35	-0.3
4,914,825	-		PfGW456L13_4400	0.35	-0.3
4,914,923	+		PfGW456L13_4400	0.42	+1.1
4,914,923	+		PfGW456L13_4400	0.42	-0.9
4,914,924	-		PfGW456L13_4400	0.42	-1.3
4,914,924	-		PfGW456L13_4400	0.42	+0.7
4,914,924	-		PfGW456L13_4400	0.42	-0.3
4,915,004	+		PfGW456L13_4400	0.48	-1.1
4,915,022	+		PfGW456L13_4400	0.49	-3.7
4,915,023	-		PfGW456L13_4400	0.49	-1.3
4,915,232	+		PfGW456L13_4400	0.64	-3.8
4,915,232	+		PfGW456L13_4400	0.64	-0.8
4,915,232	+		PfGW456L13_4400	0.64	-0.9
4,915,232	+		PfGW456L13_4400	0.64	-1.0
4,915,233	-		PfGW456L13_4400	0.64	+0.2
4,915,233	-		PfGW456L13_4400	0.64	+0.3
4,915,233	-		PfGW456L13_4400	0.64	-0.7
4,915,233	-		PfGW456L13_4400	0.64	-0.3
4,915,392	-		PfGW456L13_4400	0.75	-0.3
4,915,400	+		PfGW456L13_4400	0.75	+0.3
4,915,400	+		PfGW456L13_4400	0.75	-1.8
4,915,400	+		PfGW456L13_4400	0.75	+0.8
4,915,400	+		PfGW456L13_4400	0.75	+0.0
4,915,400	+		PfGW456L13_4400	0.75	-1.5
4,915,400	+		PfGW456L13_4400	0.75	-0.4
4,915,400	+		PfGW456L13_4400	0.75	-1.3
4,915,400	+		PfGW456L13_4400	0.75	+0.4
4,915,400	+		PfGW456L13_4400	0.75	-1.3
4,915,401	-		PfGW456L13_4400	0.75	-0.5
4,915,401	-		PfGW456L13_4400	0.75	+0.3
4,915,401	-		PfGW456L13_4400	0.75	-1.4
4,915,401	-		PfGW456L13_4400	0.75	-1.2
4,915,401	-		PfGW456L13_4400	0.75	-0.6
4,915,401	-		PfGW456L13_4400	0.75	-0.1
4,915,493	+		PfGW456L13_4400	0.82	-1.5
4,915,493	+		PfGW456L13_4400	0.82	-0.9
4,915,494	-		PfGW456L13_4400	0.82	-0.2
4,915,494	-		PfGW456L13_4400	0.82	-1.7
4,915,494	-		PfGW456L13_4400	0.82	-0.9
4,915,494	-		PfGW456L13_4400	0.82	-2.4
4,915,857	+				-1.0
4,915,857	+				-0.6
4,915,857	+				-0.3
4,915,858	-				+0.7
4,915,858	-				-0.5
4,915,861	+				-0.9
4,915,861	+				-1.3
4,915,861	+				-2.5
4,915,861	+				-0.5
4,915,862	-				+1.2
4,915,891	+				-1.2
4,915,892	-				-0.7
4,915,950	-				+1.7
4,916,005	+				-1.2
4,916,005	+				+0.2
4,916,005	+				+0.2
4,916,005	+				-0.3
4,916,006	-				-0.4
4,916,006	-				+0.7
4,916,006	-				+1.1
4,916,006	-				+1.0
4,916,050	+				-0.3
4,916,051	-				-0.5
4,916,203	+				+0.9
4,916,204	-				+1.5
4,916,234	-				-0.8
4,916,459	+				+0.8
4,916,459	+				+1.7
4,916,532	+				-0.2
4,916,540	+				-1.1
4,916,541	-				-1.2
4,916,541	-				-0.1
4,916,541	-				-0.0
4,916,690	+				-0.6
4,916,690	+				-0.1
4,916,691	-				-0.4
4,916,691	-				+0.3