Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4038

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
4,528,336	-		PfGW456L13_4036	0.64	-0.8
4,528,336	-		PfGW456L13_4036	0.64	+0.9
4,528,387	+		PfGW456L13_4036	0.86	+0.4
4,528,402	+				+1.1
4,528,419	+				-0.9
4,528,420	-				-0.8
4,528,420	-				-0.1
4,528,420	-				+1.9
4,528,450	+				+0.8
4,528,450	+				-0.7
4,528,450	+				+0.3
4,528,450	+				-0.0
4,528,450	+				+0.4
4,528,450	+				+0.9
4,528,450	+				+0.3
4,528,450	+				-0.8
4,528,451	-				+0.5
4,528,451	-				-0.3
4,528,451	-				-0.4
4,528,451	-				+1.8
4,528,451	-				+0.7
4,528,451	-				-0.4
4,528,451	-				+0.3
4,528,451	-				-0.2
4,528,452	+				-1.7
4,528,452	+				+0.6
4,528,452	+				+0.5
4,528,452	+				-0.2
4,528,452	+				-1.4
4,528,452	+				+0.4
4,528,452	+				-1.8
4,528,452	+				+0.5
4,528,452	+				+1.4
4,528,452	+				+0.2
4,528,452	+				+0.3
4,528,453	-				+1.5
4,528,453	-				-0.1
4,528,453	-				-0.3
4,528,453	-				-0.1
4,528,453	-				-0.2
4,528,453	-				-0.2
4,528,453	-				-0.0
4,528,453	-				-0.1
4,528,453	-				-0.1
4,528,453	-				+0.6
4,528,453	-				-1.4
4,528,453	-				+1.1
4,528,453	-				-0.6
4,528,453	-				-0.1
4,528,453	-				-1.2
4,528,453	-				-1.4
4,528,454	+				-0.9
4,528,454	+				+0.3
4,528,454	+				-0.2
4,528,454	+				+0.3
4,528,454	+				+1.2
4,528,455	-				+0.9
4,528,455	-				+0.2
4,528,455	-				-0.7
4,528,455	-				-0.1
4,528,455	-				-0.2
4,528,455	-				+0.1
4,528,455	-				+1.0
4,528,848	+		PfGW456L13_4037	0.64	+0.3
4,528,848	+		PfGW456L13_4037	0.64	-0.0
4,528,848	+		PfGW456L13_4037	0.64	-0.8
4,528,849	-		PfGW456L13_4037	0.64	+0.8
4,529,022	+				+0.9
4,529,022	+				-0.2
4,529,022	+				-0.3
4,529,023	-				+0.4
4,529,023	-				-0.8
4,529,023	-				+3.2
4,529,061	+				-0.6
4,529,061	+				+0.5
4,529,061	+				+0.3
4,529,061	+				-0.1
4,529,170	+				-0.3
4,529,170	+				-0.4
4,529,171	-				-0.9
4,529,171	-				-0.8
4,529,176	+				+0.1
4,529,176	+				+1.1
4,529,176	+				-0.9
4,529,177	-				+0.3
4,529,271	-				+0.8
4,529,271	-				+0.1
4,529,271	-				+0.7
4,529,271	-				+0.6
4,529,332	-				-2.0
4,529,380	-				-2.0
4,529,463	+				-2.6
4,529,464	-				-0.6
4,529,464	-				-1.2
4,529,464	-				-1.7
4,529,586	+		PfGW456L13_4038	0.12	-1.0
4,529,586	+		PfGW456L13_4038	0.12	-1.0
4,529,586	+		PfGW456L13_4038	0.12	-2.6
4,529,587	-		PfGW456L13_4038	0.12	-2.2
4,529,587	-		PfGW456L13_4038	0.12	-1.6
4,529,587	-		PfGW456L13_4038	0.12	-0.7
4,531,968	-				+0.7
4,531,968	-				+1.1
4,531,968	-				+0.4
4,531,968	-				+0.1
4,531,970	-				-0.3
4,531,970	-				-1.4
4,531,970	-				-0.3
4,531,970	-				-0.1
4,531,970	-				+2.1
4,531,970	-				+0.4
4,531,970	-				+0.2
4,531,970	-				-0.7
4,531,970	-				+0.1
4,531,970	-				-1.8
4,531,970	-				+1.7
4,531,970	-				+0.2
4,531,970	-				+0.3
4,531,970	-				+0.9
4,531,970	-				+0.0
4,531,970	-				-2.3
4,531,970	-				+1.6
4,531,970	-				+0.4
4,531,970	-				+0.0
4,531,970	-				-0.4
4,531,970	-				-1.0
4,531,970	-				+1.0
4,531,970	-				-0.5
4,531,970	-				-0.0
4,531,970	-				+0.9
4,531,970	-				-0.3
4,531,970	-				-0.2
4,531,970	-				-1.0
4,531,970	-				+0.5
4,531,972	-				+0.1
4,531,972	-				-0.6
4,531,972	-				-0.2
4,531,972	-				-0.8
4,531,972	-				-1.1
4,531,972	-				+0.7
4,531,972	-				-0.4
4,531,972	-				-0.4
4,531,972	-				-2.7
4,531,972	-				+1.5
4,531,972	-				+2.0
4,531,972	-				-0.5
4,531,972	-				+1.6
4,531,972	-				+1.1
4,531,972	-				+0.2
4,531,972	-				+1.9
4,531,972	-				+0.1
4,531,972	-				-0.2
4,531,972	-				-2.1
4,531,972	-				-0.1
4,531,972	-				+0.0
4,531,972	-				+0.0
4,531,972	-				-0.1
4,531,972	-				+0.3
4,531,972	-				-0.8
4,531,972	-				+0.3
4,531,972	-				-0.6
4,531,972	-				+2.0
4,531,972	-				+0.1
4,531,972	-				+0.9
4,531,972	-				-0.3
4,531,972	-				-0.2
4,531,972	-				+1.0
4,531,972	-				+0.4
4,531,972	-				-0.8
4,531,972	-				+0.1
4,531,972	-				-0.6
4,531,972	-				+0.9
4,531,973	+				-2.2
4,531,973	-				-0.3
4,531,974	-				-1.0
4,531,974	-				+0.8
4,531,974	-				+0.6
4,531,974	-				-0.5
4,531,974	-				-1.0
4,531,974	-				-0.7
4,531,974	-				+0.1
4,531,974	-				+0.1
4,532,145	+		PfGW456L13_4039	0.52	-0.5
4,532,146	-		PfGW456L13_4039	0.53	-0.6
4,532,157	+		PfGW456L13_4039	0.57	+0.0
4,532,157	+		PfGW456L13_4039	0.57	-0.0
4,532,157	+		PfGW456L13_4039	0.57	-0.4
4,532,158	-		PfGW456L13_4039	0.58	-0.6
4,532,158	-		PfGW456L13_4039	0.58	+1.3
4,532,158	-		PfGW456L13_4039	0.58	+1.6
4,532,158	-		PfGW456L13_4039	0.58	+0.3
4,532,204	+		PfGW456L13_4039	0.77	-0.4
4,532,204	+		PfGW456L13_4039	0.77	+0.3
4,532,205	-		PfGW456L13_4039	0.78	-0.2
4,532,226	+		PfGW456L13_4039	0.86	+0.2
4,532,226	+		PfGW456L13_4039	0.86	+0.3
4,532,226	+		PfGW456L13_4039	0.86	-0.1
4,532,226	+		PfGW456L13_4039	0.86	+0.3
4,532,226	+		PfGW456L13_4039	0.86	+0.0
4,532,226	+		PfGW456L13_4039	0.86	+0.2
4,532,226	+		PfGW456L13_4039	0.86	-0.1
4,532,227	-		PfGW456L13_4039	0.87	+0.5
4,532,227	-		PfGW456L13_4039	0.87	+1.5
4,532,227	-		PfGW456L13_4039	0.87	+1.5
4,532,227	-		PfGW456L13_4039	0.87	+0.1
4,532,235	+				-0.1
4,532,250	-				+1.2
4,532,355	-				-0.4
4,532,355	-				-1.1
4,532,546	-		PfGW456L13_4040	0.16	+0.2
4,532,901	-		PfGW456L13_4040	0.47	+1.2