Experiment: Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3935 and PfGW456L13_3936 are separated by 41 nucleotides PfGW456L13_3936 and PfGW456L13_3937 are separated by 98 nucleotides PfGW456L13_3937 and PfGW456L13_3938 overlap by 17 nucleotides
PfGW456L13_3935 - Amidophosphoribosyltransferase (EC 2.4.2.14), at 4,412,202 to 4,413,707
_3935
PfGW456L13_3936 - Colicin V production protein, at 4,413,749 to 4,414,309
_3936
PfGW456L13_3937 - DedD protein, at 4,414,408 to 4,415,076
_3937
PfGW456L13_3938 - Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17), at 4,415,060 to 4,416,367
_3938
Position (kb)
4413
4414
4415 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4413.747 kb on - strand at 4413.797 kb on - strand at 4413.879 kb on - strand, within PfGW456L13_3936 at 4414.057 kb on - strand, within PfGW456L13_3936 at 4414.057 kb on - strand, within PfGW456L13_3936 at 4414.057 kb on - strand, within PfGW456L13_3936 at 4414.057 kb on - strand, within PfGW456L13_3936 at 4414.074 kb on - strand, within PfGW456L13_3936 at 4414.074 kb on - strand, within PfGW456L13_3936 at 4414.116 kb on - strand, within PfGW456L13_3936 at 4414.116 kb on - strand, within PfGW456L13_3936 at 4414.116 kb on - strand, within PfGW456L13_3936 at 4414.116 kb on - strand, within PfGW456L13_3936 at 4414.116 kb on - strand, within PfGW456L13_3936 at 4414.118 kb on - strand, within PfGW456L13_3936 at 4414.118 kb on - strand, within PfGW456L13_3936 at 4414.118 kb on - strand, within PfGW456L13_3936 at 4414.118 kb on - strand, within PfGW456L13_3936 at 4414.320 kb on - strand at 4414.404 kb on - strand at 4414.409 kb on + strand at 4414.410 kb on - strand at 4414.410 kb on - strand at 4414.550 kb on + strand, within PfGW456L13_3937 at 4414.551 kb on - strand, within PfGW456L13_3937 at 4414.559 kb on + strand, within PfGW456L13_3937 at 4414.560 kb on - strand, within PfGW456L13_3937 at 4414.560 kb on - strand, within PfGW456L13_3937 at 4414.560 kb on - strand, within PfGW456L13_3937 at 4415.055 kb on - strand at 4415.055 kb on - strand at 4415.055 kb on - strand at 4415.055 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.125 mg/ml remove 4,413,747 - -0.4 4,413,797 - +0.0 4,413,879 - PfGW456L13_3936 0.23 -1.7 4,414,057 - PfGW456L13_3936 0.55 +0.3 4,414,057 - PfGW456L13_3936 0.55 +0.3 4,414,057 - PfGW456L13_3936 0.55 -1.0 4,414,057 - PfGW456L13_3936 0.55 -1.7 4,414,074 - PfGW456L13_3936 0.58 -0.4 4,414,074 - PfGW456L13_3936 0.58 -0.4 4,414,116 - PfGW456L13_3936 0.65 -1.2 4,414,116 - PfGW456L13_3936 0.65 -1.3 4,414,116 - PfGW456L13_3936 0.65 -0.4 4,414,116 - PfGW456L13_3936 0.65 -3.0 4,414,116 - PfGW456L13_3936 0.65 -2.7 4,414,118 - PfGW456L13_3936 0.66 -2.1 4,414,118 - PfGW456L13_3936 0.66 +0.0 4,414,118 - PfGW456L13_3936 0.66 -1.4 4,414,118 - PfGW456L13_3936 0.66 -1.6 4,414,320 - -0.1 4,414,404 - -0.5 4,414,409 + -0.6 4,414,410 - -0.4 4,414,410 - +1.4 4,414,550 + PfGW456L13_3937 0.21 +0.8 4,414,551 - PfGW456L13_3937 0.21 +1.1 4,414,559 + PfGW456L13_3937 0.23 +0.8 4,414,560 - PfGW456L13_3937 0.23 +1.2 4,414,560 - PfGW456L13_3937 0.23 +1.7 4,414,560 - PfGW456L13_3937 0.23 +1.5 4,415,055 - +0.2 4,415,055 - +0.2 4,415,055 - -0.5 4,415,055 - +0.4
Or see this region's nucleotide sequence