Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3000

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
3,341,249	+		PfGW456L13_2999	0.56	-0.3
3,341,250	-		PfGW456L13_2999	0.56	+0.2
3,341,250	-		PfGW456L13_2999	0.56	+0.6
3,341,573	+		PfGW456L13_2999	0.74	+0.1
3,341,574	-		PfGW456L13_2999	0.75	-0.4
3,341,574	-		PfGW456L13_2999	0.75	-0.0
3,341,574	-		PfGW456L13_2999	0.75	+0.0
3,341,574	-		PfGW456L13_2999	0.75	+1.6
3,341,654	+		PfGW456L13_2999	0.79	-0.6
3,341,654	+		PfGW456L13_2999	0.79	+1.2
3,341,655	-		PfGW456L13_2999	0.79	-0.4
3,341,666	+		PfGW456L13_2999	0.80	+0.1
3,341,666	+		PfGW456L13_2999	0.80	+0.1
3,341,666	+		PfGW456L13_2999	0.80	+0.2
3,341,667	-		PfGW456L13_2999	0.80	+0.8
3,341,667	-		PfGW456L13_2999	0.80	-1.0
3,341,667	-		PfGW456L13_2999	0.80	+1.0
3,341,667	-		PfGW456L13_2999	0.80	-1.7
3,341,735	+		PfGW456L13_2999	0.84	+0.3
3,341,735	+		PfGW456L13_2999	0.84	+0.3
3,341,735	+		PfGW456L13_2999	0.84	+0.7
3,341,736	-		PfGW456L13_2999	0.84	-0.3
3,341,736	-		PfGW456L13_2999	0.84	+0.3
3,341,747	+		PfGW456L13_2999	0.85	+1.0
3,341,779	+		PfGW456L13_2999	0.86	-0.0
3,341,779	+		PfGW456L13_2999	0.86	-0.3
3,341,779	+		PfGW456L13_2999	0.86	+2.3
3,341,780	-		PfGW456L13_2999	0.86	+1.3
3,341,780	-		PfGW456L13_2999	0.86	+0.0
3,341,911	+				+0.8
3,341,911	+				-0.0
3,341,911	+				+0.1
3,341,911	+				-0.2
3,341,911	+				+2.9
3,341,912	-				-0.5
3,341,912	-				+1.1
3,341,912	-				+0.1
3,341,912	-				+0.8
3,341,944	+				-0.8
3,341,944	+				+2.1
3,341,945	-				+0.6
3,341,945	-				+0.6
3,342,061	-				-0.3
3,342,102	+				+1.8
3,342,102	+				-0.3
3,342,102	+				+0.0
3,342,102	+				+0.0
3,342,103	-				-2.6
3,342,110	+				+0.1
3,342,110	+				-0.9
3,342,356	+		PfGW456L13_3000	0.78	-0.4
3,342,356	+		PfGW456L13_3000	0.78	-0.8
3,342,381	+				+0.3
3,342,381	+				-0.8
3,342,381	+				+0.2
3,342,382	-				-0.6
3,342,385	+				-0.4
3,342,385	+				-1.4
3,342,385	+				+0.6
3,342,385	+				+0.3
3,342,385	+				+0.8
3,342,385	+				+0.6
3,342,385	+				+0.2
3,342,385	+				+0.2
3,342,385	+				-0.1
3,342,385	+				-0.8
3,342,385	+				+0.2
3,342,385	+				-0.1
3,342,385	+				-0.5
3,342,385	+				-1.3
3,342,385	+				-1.1
3,342,386	-				-0.1
3,342,386	-				+0.7
3,342,386	-				+0.1
3,342,386	-				-0.2
3,342,386	-				+0.4
3,342,386	-				-0.0
3,342,386	-				-0.6
3,342,428	+				+0.1
3,342,428	+				+0.6
3,342,428	+				+0.7
3,342,429	-				-0.9
3,342,429	-				+0.1
3,342,432	+				-0.2
3,342,432	+				-1.2
3,342,433	-				+0.9
3,342,433	-				+0.1
3,342,433	-				+0.1
3,342,457	+				-0.0
3,342,457	+				+0.6
3,342,457	+				+0.3
3,342,458	-				-0.6
3,342,458	-				-0.4
3,342,458	-				-0.9
3,342,458	-				-0.1
3,342,458	-				-0.8
3,342,458	-				-0.6
3,342,548	+				+0.0
3,342,625	-				-0.4
3,342,643	+				-1.2
3,342,644	-				+1.0
3,342,644	-				+0.3
3,342,644	-				-0.2
3,342,650	+				+1.3
3,342,650	+				-0.4
3,342,650	+				-1.0
3,342,651	-				-0.3
3,342,651	-				+1.0
3,342,651	-				+0.0
3,342,651	-				+0.2
3,342,654	-				-1.0
3,342,710	+				+0.5
3,342,754	-				+0.9
3,342,789	-		PfGW456L13_3001	0.12	-0.4
3,342,960	+		PfGW456L13_3001	0.30	-0.3
3,342,960	+		PfGW456L13_3001	0.30	-1.8
3,342,960	+		PfGW456L13_3001	0.30	-0.1
3,342,960	+		PfGW456L13_3001	0.30	+0.7
3,342,960	+		PfGW456L13_3001	0.30	+0.0
3,342,960	+		PfGW456L13_3001	0.30	+2.0
3,342,960	+		PfGW456L13_3001	0.30	+2.6
3,342,960	+		PfGW456L13_3001	0.30	+1.3
3,342,961	-		PfGW456L13_3001	0.30	+0.4
3,342,961	-		PfGW456L13_3001	0.30	+0.4
3,342,961	-		PfGW456L13_3001	0.30	-0.6
3,342,961	-		PfGW456L13_3001	0.30	+0.6
3,342,961	-		PfGW456L13_3001	0.30	+1.2
3,342,961	-		PfGW456L13_3001	0.30	-0.0
3,342,962	+		PfGW456L13_3001	0.30	-1.3
3,343,011	+		PfGW456L13_3001	0.35	-0.2
3,343,012	-		PfGW456L13_3001	0.35	+0.6
3,343,012	-		PfGW456L13_3001	0.35	-1.3
3,343,012	-				+0.6
3,343,025	+		PfGW456L13_3001	0.36	-0.4
3,343,194	+		PfGW456L13_3001	0.54	+0.1
3,343,194	+		PfGW456L13_3001	0.54	+0.0
3,343,194	+		PfGW456L13_3001	0.54	+0.4
3,343,194	+		PfGW456L13_3001	0.54	-0.4
3,343,195	-		PfGW456L13_3001	0.54	+1.1