Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2050

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
2,252,899	+		PfGW456L13_2049	0.44	+0.1
2,252,984	+		PfGW456L13_2049	0.49	+0.9
2,252,984	+		PfGW456L13_2049	0.49	+0.0
2,252,985	-		PfGW456L13_2049	0.49	+0.1
2,252,985	-		PfGW456L13_2049	0.49	-0.2
2,253,055	+		PfGW456L13_2049	0.53	+1.2
2,253,055	+		PfGW456L13_2049	0.53	+0.6
2,253,056	-		PfGW456L13_2049	0.53	-0.1
2,253,056	-		PfGW456L13_2049	0.53	+0.6
2,253,056	-		PfGW456L13_2049	0.53	+0.1
2,253,141	-		PfGW456L13_2049	0.58	+1.8
2,253,173	+		PfGW456L13_2049	0.60	-1.7
2,253,173	+		PfGW456L13_2049	0.60	+0.1
2,253,173	+		PfGW456L13_2049	0.60	-1.2
2,253,173	+		PfGW456L13_2049	0.60	-0.7
2,253,174	-		PfGW456L13_2049	0.60	-0.9
2,253,326	+		PfGW456L13_2049	0.69	-0.7
2,253,326	+		PfGW456L13_2049	0.69	+1.3
2,253,326	+		PfGW456L13_2049	0.69	+0.6
2,253,327	-		PfGW456L13_2049	0.69	+0.8
2,253,389	-		PfGW456L13_2049	0.73	-0.7
2,253,467	+		PfGW456L13_2049	0.78	-0.7
2,253,467	+		PfGW456L13_2049	0.78	+1.1
2,253,467	+		PfGW456L13_2049	0.78	+0.1
2,253,467	+		PfGW456L13_2049	0.78	+0.2
2,253,468	-		PfGW456L13_2049	0.78	+0.2
2,253,468	-		PfGW456L13_2049	0.78	-0.1
2,253,468	-		PfGW456L13_2049	0.78	+1.4
2,253,780	-				+0.4
2,254,084	+		PfGW456L13_2050	0.48	+0.0
2,254,084	+		PfGW456L13_2050	0.48	-2.1
2,254,085	-		PfGW456L13_2050	0.48	-0.6
2,254,085	-		PfGW456L13_2050	0.48	-0.7
2,254,085	-		PfGW456L13_2050	0.48	+0.0
2,254,085	-		PfGW456L13_2050	0.48	-0.7
2,254,325	+				+0.6
2,254,325	+				-0.8
2,254,325	+				-1.1
2,254,326	-				+0.1
2,254,326	-				+0.2
2,254,326	-				-0.2
2,254,326	-				+0.2
2,254,326	-				+0.1
2,254,360	-				-1.5
2,254,374	-				-0.4
2,254,397	+				+0.7
2,254,397	+				+0.3
2,254,397	+				-0.5
2,254,397	+				-0.8
2,254,397	+				-0.5
2,254,397	+				-0.2
2,254,397	+				+1.9
2,254,397	+				+1.3
2,254,397	+				-0.1
2,254,397	+				+0.5
2,254,397	+				+0.2
2,254,397	+				+1.2
2,254,397	+				+0.4
2,254,398	-				-0.9
2,254,398	-				-2.5
2,254,398	-				-0.7
2,254,398	-				+0.0
2,254,398	-				+0.7
2,254,398	-				-0.0
2,254,398	-				+0.8
2,254,427	+				-1.9
2,254,427	+				-1.2
2,254,427	+				+0.7
2,254,427	+				+0.7
2,254,428	-				-0.3
2,254,428	-				-0.6
2,254,428	-				+0.3
2,254,428	-				-0.2
2,254,428	-				+1.6
2,254,428	-				-1.3
2,254,575	+		PfGW456L13_2051	0.18	+1.3
2,254,575	+		PfGW456L13_2051	0.18	-0.1
2,254,575	+		PfGW456L13_2051	0.18	+0.0
2,254,576	-		PfGW456L13_2051	0.18	-1.9
2,254,753	+		PfGW456L13_2051	0.40	-0.1
2,254,753	+		PfGW456L13_2051	0.40	+0.7
2,254,753	+		PfGW456L13_2051	0.40	-0.5
2,254,753	+		PfGW456L13_2051	0.40	+0.7
2,254,806	-		PfGW456L13_2051	0.47	-0.7
2,254,806	-		PfGW456L13_2051	0.47	+0.7
2,254,806	-		PfGW456L13_2051	0.47	+0.7
2,254,854	+		PfGW456L13_2051	0.53	+0.6
2,254,855	-		PfGW456L13_2051	0.53	+0.6
2,254,855	-		PfGW456L13_2051	0.53	-0.5
2,254,855	-		PfGW456L13_2051	0.53	+0.8
2,254,855	-		PfGW456L13_2051	0.53	-0.0
2,254,855	-		PfGW456L13_2051	0.53	-0.6
2,254,908	+		PfGW456L13_2051	0.59	+0.9
2,254,908	+		PfGW456L13_2051	0.59	-0.5
2,254,908	+		PfGW456L13_2051	0.59	+0.5
2,254,908	+		PfGW456L13_2051	0.59	-0.3
2,254,909	-		PfGW456L13_2051	0.60	+0.7
2,254,909	-		PfGW456L13_2051	0.60	-0.8
2,254,909	-		PfGW456L13_2051	0.60	+0.4
2,254,909	-		PfGW456L13_2051	0.60	+1.8
2,254,979	+		PfGW456L13_2051	0.68	-0.8
2,254,979	+		PfGW456L13_2051	0.68	-1.2
2,254,979	+		PfGW456L13_2051	0.68	-0.2
2,254,980	-		PfGW456L13_2051	0.68	-0.6
2,254,980	-		PfGW456L13_2051	0.68	+0.2
2,254,980	-		PfGW456L13_2051	0.68	+0.7
2,254,980	-		PfGW456L13_2051	0.68	+1.1
2,254,983	+		PfGW456L13_2051	0.69	-0.7
2,254,983	+		PfGW456L13_2051	0.69	+0.7
2,254,984	-		PfGW456L13_2051	0.69	-1.0
2,254,984	-		PfGW456L13_2051	0.69	+0.3
2,254,994	-		PfGW456L13_2051	0.70	+0.6
2,255,047	+		PfGW456L13_2051	0.77	+0.4
2,255,177	+				+0.5
2,255,177	+				+0.1
2,255,177	+				+0.6
2,255,177	+				-0.4
2,255,178	-				-1.0
2,255,178	-				+1.3
2,255,196	+				+0.1
2,255,196	+				-0.7
2,255,196	+				+0.0
2,255,197	-				+2.1