Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2011

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
2,214,287	+				-0.6
2,214,288	-				+1.5
2,214,288	-				+0.0
2,214,323	-				-0.9
2,214,348	-				-0.1
2,214,610	+		PfGW456L13_2010	0.15	+0.5
2,214,610	+		PfGW456L13_2010	0.15	-0.9
2,214,611	-		PfGW456L13_2010	0.15	-2.5
2,214,611	-		PfGW456L13_2010	0.15	-1.9
2,214,611	-		PfGW456L13_2010	0.15	-0.8
2,214,637	+		PfGW456L13_2010	0.19	-0.6
2,214,752	+		PfGW456L13_2010	0.38	-0.2
2,214,752	+		PfGW456L13_2010	0.38	+0.3
2,214,752	+		PfGW456L13_2010	0.38	+0.9
2,214,752	+		PfGW456L13_2010	0.38	-0.6
2,214,753	-		PfGW456L13_2010	0.38	-0.1
2,214,761	+		PfGW456L13_2010	0.40	+0.4
2,214,761	+		PfGW456L13_2010	0.40	-0.1
2,214,761	+		PfGW456L13_2010	0.40	-0.6
2,214,761	+		PfGW456L13_2010	0.40	-0.2
2,214,762	-		PfGW456L13_2010	0.40	-0.1
2,214,762	-		PfGW456L13_2010	0.40	-0.2
2,214,824	+		PfGW456L13_2010	0.50	+0.5
2,214,824	+		PfGW456L13_2010	0.50	+0.1
2,214,824	+		PfGW456L13_2010	0.50	+0.5
2,214,825	-		PfGW456L13_2010	0.50	-0.9
2,214,825	-		PfGW456L13_2010	0.50	+0.5
2,214,836	+		PfGW456L13_2010	0.52	+0.3
2,215,004	+		PfGW456L13_2010	0.80	-1.2
2,215,011	-		PfGW456L13_2010	0.81	+0.6
2,215,097	+				+0.5
2,215,097	+				+0.6
2,215,097	+				-0.0
2,215,097	+				-0.4
2,215,097	+				-0.3
2,215,097	+				-0.6
2,215,097	+				+0.6
2,215,097	+				-1.8
2,215,098	-				-1.4
2,215,098	-				-1.8
2,215,098	-				+0.4
2,215,112	+				-0.8
2,215,186	+				+0.9
2,215,186	+				+0.9
2,215,186	+				+1.1
2,215,187	-				-1.3
2,215,212	+				+0.5
2,215,213	-				-2.8
2,215,535	+		PfGW456L13_2011	0.43	-0.5
2,215,535	+		PfGW456L13_2011	0.43	-1.0
2,215,535	+		PfGW456L13_2011	0.43	-1.1
2,215,536	-		PfGW456L13_2011	0.43	-1.9
2,215,536	-		PfGW456L13_2011	0.43	+1.4
2,215,700	+		PfGW456L13_2011	0.67	-2.1
2,215,701	-		PfGW456L13_2011	0.67	-0.2
2,215,701	-		PfGW456L13_2011	0.67	-0.5
2,215,721	+		PfGW456L13_2011	0.70	-1.6
2,215,721	+		PfGW456L13_2011	0.70	-2.0
2,215,722	-		PfGW456L13_2011	0.71	-1.3
2,215,722	-		PfGW456L13_2011	0.71	-1.6
2,215,937	+				+1.6
2,215,937	+				+0.3
2,215,937	+				+0.3
2,216,164	+		PfGW456L13_2012	0.18	+1.6
2,216,165	-		PfGW456L13_2012	0.18	-0.7
2,216,166	+		PfGW456L13_2012	0.18	+2.2
2,216,166	+		PfGW456L13_2012	0.18	+0.2
2,216,166	+		PfGW456L13_2012	0.18	+1.3
2,216,166	+		PfGW456L13_2012	0.18	+1.6
2,216,167	-		PfGW456L13_2012	0.18	-0.9
2,216,167	-		PfGW456L13_2012	0.18	-0.5
2,216,167	-		PfGW456L13_2012	0.18	+1.7
2,216,170	+		PfGW456L13_2012	0.19	-0.3
2,216,170	+		PfGW456L13_2012	0.19	+0.8
2,216,170	+		PfGW456L13_2012	0.19	+0.1
2,216,170	+		PfGW456L13_2012	0.19	+0.2
2,216,170	+		PfGW456L13_2012	0.19	+1.2
2,216,170	+		PfGW456L13_2012	0.19	+0.5
2,216,170	+		PfGW456L13_2012	0.19	+0.5
2,216,170	+		PfGW456L13_2012	0.19	+0.4
2,216,170	+		PfGW456L13_2012	0.19	+0.7
2,216,170	+		PfGW456L13_2012	0.19	+1.4
2,216,171	-		PfGW456L13_2012	0.19	-0.8
2,216,171	-		PfGW456L13_2012	0.19	-0.7
2,216,171	-		PfGW456L13_2012	0.19	-1.3
2,216,171	-		PfGW456L13_2012	0.19	-0.3
2,216,171	-		PfGW456L13_2012	0.19	-0.2
2,216,230	+		PfGW456L13_2012	0.23	+0.4
2,216,230	+		PfGW456L13_2012	0.23	-0.5
2,216,231	-		PfGW456L13_2012	0.23	+0.2
2,216,231	-		PfGW456L13_2012	0.23	-0.9
2,216,416	+		PfGW456L13_2012	0.37	+0.5
2,216,417	-		PfGW456L13_2012	0.37	-0.2
2,216,417	-		PfGW456L13_2012	0.37	+1.0
2,216,607	+		PfGW456L13_2012	0.51	+0.9
2,216,607	+		PfGW456L13_2012	0.51	+1.8
2,216,608	-		PfGW456L13_2012	0.51	+2.3
2,216,608	-		PfGW456L13_2012	0.51	+1.7
2,216,661	+		PfGW456L13_2012	0.55	-0.3
2,216,826	-		PfGW456L13_2012	0.67	+3.1