Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1889

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
2,079,856	+		PfGW456L13_1888	0.28	-0.1
2,079,856	+		PfGW456L13_1888	0.28	-0.6
2,079,856	+		PfGW456L13_1888	0.28	-0.8
2,079,856	+		PfGW456L13_1888	0.28	-0.4
2,079,856	+		PfGW456L13_1888	0.28	+0.3
2,079,857	-		PfGW456L13_1888	0.28	-0.2
2,079,857	-		PfGW456L13_1888	0.28	-0.3
2,079,857	-				-1.6
2,079,857	-		PfGW456L13_1888	0.28	-0.6
2,079,857	-		PfGW456L13_1888	0.28	+0.6
2,080,001	+		PfGW456L13_1888	0.42	-0.0
2,080,001	+		PfGW456L13_1888	0.42	+0.9
2,080,001	+		PfGW456L13_1888	0.42	-0.1
2,080,002	-		PfGW456L13_1888	0.42	+0.8
2,080,029	+		PfGW456L13_1888	0.45	+0.8
2,080,029	+		PfGW456L13_1888	0.45	-0.3
2,080,029	+		PfGW456L13_1888	0.45	-0.7
2,080,030	-		PfGW456L13_1888	0.45	-0.9
2,080,030	-		PfGW456L13_1888	0.45	+1.1
2,080,030	-		PfGW456L13_1888	0.45	-0.8
2,080,030	-		PfGW456L13_1888	0.45	-0.5
2,080,031	+		PfGW456L13_1888	0.45	-0.3
2,080,031	+		PfGW456L13_1888	0.45	-0.2
2,080,031	+		PfGW456L13_1888	0.45	-0.7
2,080,031	+		PfGW456L13_1888	0.45	+0.0
2,080,032	-		PfGW456L13_1888	0.45	-0.7
2,080,032	-		PfGW456L13_1888	0.45	+0.6
2,080,032	-		PfGW456L13_1888	0.45	+0.6
2,080,032	-		PfGW456L13_1888	0.45	+0.9
2,080,032	-		PfGW456L13_1888	0.45	+0.6
2,080,032	-		PfGW456L13_1888	0.45	-0.1
2,080,176	-		PfGW456L13_1888	0.60	+0.4
2,080,215	+		PfGW456L13_1888	0.64	-0.0
2,080,215	+		PfGW456L13_1888	0.64	+0.8
2,080,216	-		PfGW456L13_1888	0.64	+0.6
2,080,216	-		PfGW456L13_1888	0.64	-0.2
2,080,216	-				+0.3
2,080,216	-		PfGW456L13_1888	0.64	+0.7
2,080,239	+		PfGW456L13_1888	0.66	-0.2
2,080,239	+		PfGW456L13_1888	0.66	-0.4
2,080,242	+		PfGW456L13_1888	0.66	-0.2
2,080,242	+		PfGW456L13_1888	0.66	-0.7
2,080,242	+		PfGW456L13_1888	0.66	+0.0
2,080,243	-		PfGW456L13_1888	0.66	+0.6
2,080,243	-		PfGW456L13_1888	0.66	+1.2
2,080,243	-		PfGW456L13_1888	0.66	+0.0
2,080,243	-		PfGW456L13_1888	0.66	-1.0
2,080,356	+		PfGW456L13_1888	0.78	+0.3
2,080,356	+		PfGW456L13_1888	0.78	-1.3
2,080,431	-		PfGW456L13_1888	0.85	+0.8
2,080,431	-		PfGW456L13_1888	0.85	-0.1
2,080,503	-				+0.4
2,080,514	+				+0.3
2,080,514	+				-0.1
2,080,514	+				+1.7
2,080,620	+				-0.8
2,080,756	+				-1.9
2,080,756	+				-0.9
2,080,756	+				+0.1
2,080,756	+				+0.7
2,080,756	+				-1.7
2,080,757	-				-1.3
2,080,794	+				+0.4
2,080,795	-				-0.8
2,081,020	+		PfGW456L13_1889	0.12	-2.3
2,081,020	+		PfGW456L13_1889	0.12	-1.3
2,081,021	-		PfGW456L13_1889	0.12	+1.4
2,081,021	-		PfGW456L13_1889	0.12	-0.9
2,081,021	-		PfGW456L13_1889	0.12	-1.6
2,081,170	+		PfGW456L13_1889	0.20	-1.6
2,081,170	+		PfGW456L13_1889	0.20	-1.3
2,081,387	+		PfGW456L13_1889	0.32	+1.1
2,081,388	+		PfGW456L13_1889	0.32	-1.9
2,081,940	-		PfGW456L13_1889	0.62	-0.9
2,082,411	+		PfGW456L13_1889	0.88	-0.1
2,082,598	+				-2.6
2,082,599	-				-1.0
2,082,619	+				-0.1
2,082,620	-				+0.5
2,082,620	-				-1.2
2,082,744	+		PfGW456L13_1890	0.13	-0.0
2,082,744	+		PfGW456L13_1890	0.13	+1.4
2,082,744	+		PfGW456L13_1890	0.13	+0.0
2,082,744	+		PfGW456L13_1890	0.13	+0.0
2,082,744	+		PfGW456L13_1890	0.13	-0.1
2,082,745	-		PfGW456L13_1890	0.13	-0.1
2,082,745	-		PfGW456L13_1890	0.13	-0.4
2,082,745	-		PfGW456L13_1890	0.13	+1.4
2,082,745	-		PfGW456L13_1890	0.13	-0.5
2,082,754	+		PfGW456L13_1890	0.14	-0.9
2,082,754	+		PfGW456L13_1890	0.14	+0.2
2,082,754	+		PfGW456L13_1890	0.14	+1.0
2,082,754	+		PfGW456L13_1890	0.14	-0.8
2,082,849	+		PfGW456L13_1890	0.24	-2.1
2,082,850	-		PfGW456L13_1890	0.24	-0.3
2,083,396	+		PfGW456L13_1890	0.81	+0.4
2,083,396	+		PfGW456L13_1890	0.81	+0.0
2,083,396	+		PfGW456L13_1890	0.81	-0.5
2,083,396	+		PfGW456L13_1890	0.81	-0.4
2,083,397	-		PfGW456L13_1890	0.81	-0.2
2,083,397	-		PfGW456L13_1890	0.81	+0.1
2,083,397	-		PfGW456L13_1890	0.81	+0.6
2,083,397	-		PfGW456L13_1890	0.81	-0.2
2,083,397	-				+3.0
2,083,397	-		PfGW456L13_1890	0.81	+1.2
2,083,397	-		PfGW456L13_1890	0.81	-1.3
2,083,489	+				-0.1
2,083,490	-				+0.4
2,083,528	+				-0.6
2,083,528	+				+0.3
2,083,590	+				+0.0
2,083,597	-				+0.9