Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1720

Experiment: Vancomycin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.125 mg/ml
1,893,360	+				+0.9
1,893,360	+				-0.3
1,893,889	+				-0.8
1,893,889	+				-0.2
1,893,889	+				+0.2
1,893,889	+				+0.1
1,893,890	-				-0.8
1,893,890	-				-0.2
1,893,890	-				-1.3
1,893,890	-				+0.4
1,893,890	-				+1.1
1,893,924	+				-0.4
1,893,924	+				+1.0
1,893,924	+				-0.9
1,893,924	+				-1.6
1,893,924	+				+0.3
1,893,924	+				+1.3
1,893,924	+				+0.9
1,893,924	+				+0.5
1,893,924	+				+0.2
1,893,925	-				+0.1
1,893,925	-				+1.6
1,893,925	-				+0.5
1,893,925	-				+0.3
1,893,925	-				-0.4
1,893,925	-				+1.1
1,893,963	+				+0.7
1,893,963	+				-0.3
1,893,963	+				+0.5
1,893,964	-				+0.1
1,893,964	-				-0.5
1,893,967	+				-1.2
1,893,967	+				-0.4
1,893,968	-				+0.5
1,893,968	-				+0.8
1,893,968	-				+1.0
1,894,152	+		PfGW456L13_1720	0.10	-1.2
1,894,152	+		PfGW456L13_1720	0.10	-0.2
1,894,152	+		PfGW456L13_1720	0.10	-0.2
1,894,152	+		PfGW456L13_1720	0.10	+1.2
1,894,153	-		PfGW456L13_1720	0.11	+0.7
1,894,153	-		PfGW456L13_1720	0.11	+0.3
1,894,153	-		PfGW456L13_1720	0.11	+1.2
1,894,153	-		PfGW456L13_1720	0.11	+0.4
1,894,153	-		PfGW456L13_1720	0.11	+0.0
1,894,194	+		PfGW456L13_1720	0.13	+0.5
1,894,194	+		PfGW456L13_1720	0.13	+0.6
1,894,194	+		PfGW456L13_1720	0.13	-0.6
1,894,195	-		PfGW456L13_1720	0.13	+1.2
1,894,195	-		PfGW456L13_1720	0.13	+1.8
1,894,195	-		PfGW456L13_1720	0.13	+0.0
1,894,195	-		PfGW456L13_1720	0.13	+1.0
1,894,199	+		PfGW456L13_1720	0.13	+0.0
1,894,199	+		PfGW456L13_1720	0.13	-1.3
1,894,199	+		PfGW456L13_1720	0.13	-0.4
1,894,200	-		PfGW456L13_1720	0.13	+0.3
1,894,200	-		PfGW456L13_1720	0.13	-0.8
1,894,434	+		PfGW456L13_1720	0.26	+0.1
1,894,435	-		PfGW456L13_1720	0.26	-1.6
1,894,435	-		PfGW456L13_1720	0.26	+0.7
1,894,435	-		PfGW456L13_1720	0.26	+0.0
1,894,435	-		PfGW456L13_1720	0.26	+0.1
1,894,435	-		PfGW456L13_1720	0.26	+0.7
1,894,496	+		PfGW456L13_1720	0.29	+0.7
1,894,982	+		PfGW456L13_1720	0.56	+0.5
1,894,982	+		PfGW456L13_1720	0.56	+0.3
1,894,982	+		PfGW456L13_1720	0.56	+0.0
1,894,983	-		PfGW456L13_1720	0.56	+0.8
1,894,983	-		PfGW456L13_1720	0.56	-0.3
1,894,983	-		PfGW456L13_1720	0.56	+0.4
1,894,983	-		PfGW456L13_1720	0.56	-0.1
1,894,983	-		PfGW456L13_1720	0.56	-1.4
1,895,260	+		PfGW456L13_1720	0.72	-0.1
1,895,260	+		PfGW456L13_1720	0.72	-0.4
1,895,260	+		PfGW456L13_1720	0.72	+0.3
1,895,261	-		PfGW456L13_1720	0.72	-0.3
1,895,261	-		PfGW456L13_1720	0.72	-2.3
1,895,261	-		PfGW456L13_1720	0.72	-0.5
1,895,261	-		PfGW456L13_1720	0.72	+0.3
1,895,261	-		PfGW456L13_1720	0.72	-0.5
1,895,262	+		PfGW456L13_1720	0.72	-0.3
1,895,262	+		PfGW456L13_1720	0.72	-0.1
1,895,263	-		PfGW456L13_1720	0.72	+0.0
1,895,270	+		PfGW456L13_1720	0.72	-0.5
1,895,271	-		PfGW456L13_1720	0.72	+1.1
1,895,366	+		PfGW456L13_1720	0.77	-0.3
1,895,754	-				-2.1
1,895,804	+				+0.5
1,895,839	+				-0.5
1,895,839	+				-0.7
1,895,840	-				+0.7
1,895,840	-				-0.1
1,895,906	+				-0.8
1,895,907	-				+2.3
1,895,907	-				-1.1
1,895,907	-				-0.1
1,895,968	+				-0.2
1,896,082	+		PfGW456L13_1721	0.22	-1.8
1,896,082	+		PfGW456L13_1721	0.22	-2.8
1,896,082	+		PfGW456L13_1721	0.22	-0.4
1,896,082	+		PfGW456L13_1721	0.22	-2.1
1,896,083	-		PfGW456L13_1721	0.23	-2.3
1,896,083	-		PfGW456L13_1721	0.23	+0.7
1,896,130	+		PfGW456L13_1721	0.28	+0.2
1,896,130	+		PfGW456L13_1721	0.28	-0.8
1,896,130	+		PfGW456L13_1721	0.28	-1.2
1,896,131	-		PfGW456L13_1721	0.28	-1.0
1,896,136	+		PfGW456L13_1721	0.28	-0.5
1,896,137	-		PfGW456L13_1721	0.29	-3.0
1,896,137	-		PfGW456L13_1721	0.29	-0.9
1,896,137	-		PfGW456L13_1721	0.29	+0.0
1,896,311	-		PfGW456L13_1721	0.48	-0.3
1,896,311	-		PfGW456L13_1721	0.48	-1.4
1,896,369	-		PfGW456L13_1721	0.54	+0.2
1,896,369	-		PfGW456L13_1721	0.54	-0.8
1,896,457	+		PfGW456L13_1721	0.64	+1.2
1,896,457	+		PfGW456L13_1721	0.64	-0.1
1,896,458	-		PfGW456L13_1721	0.64	-3.0
1,896,458	-		PfGW456L13_1721	0.64	-3.3
1,896,458	-		PfGW456L13_1721	0.64	-2.4
1,896,702	+				-0.3
1,896,703	-				-1.3
1,896,715	+				-0.8
1,896,715	+				-3.3
1,896,715	+				-1.0
1,896,715	+				+0.3
1,896,716	-				+0.4
1,896,716	-				-1.7
1,896,716	-				-0.3
1,896,756	+				-0.6
1,896,756	+				-1.7
1,896,756	+				-1.6
1,896,756	+				-0.4
1,896,756	+				+0.2
1,896,756	+				-0.2
1,896,756	+				-0.6
1,896,756	+				-0.3
1,896,756	+				-0.2
1,896,757	-				-0.3
1,896,757	-				+1.2
1,896,757	-				+0.3
1,896,757	-				+0.2