Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2271

Experiment: m.b. Spectinomycin 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2270 and B158DRAFT_2271 are separated by 173 nucleotidesB158DRAFT_2271 and B158DRAFT_2272 are separated by 65 nucleotides B158DRAFT_2270: B158DRAFT_2270 - Small-conductance mechanosensitive channel, at 432,419 to 433,258 _2270 B158DRAFT_2271: B158DRAFT_2271 - MiaB-like tRNA modifying enzyme, at 433,432 to 434,775 _2271 B158DRAFT_2272: B158DRAFT_2272 - Signal transduction histidine kinase, at 434,841 to 437,684 _2272 Position (kb) 433 434 435Strain fitness (log2 ratio) -2 -1 0 1at 432.647 kb on + strand, within B158DRAFT_2270at 432.706 kb on + strand, within B158DRAFT_2270at 432.706 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.752 kb on + strand, within B158DRAFT_2270at 432.791 kb on + strand, within B158DRAFT_2270at 432.801 kb on + strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.811 kb on - strand, within B158DRAFT_2270at 432.811 kb on - strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.848 kb on - strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.877 kb on - strand, within B158DRAFT_2270at 432.952 kb on + strand, within B158DRAFT_2270at 432.960 kb on - strand, within B158DRAFT_2270at 432.960 kb on - strand, within B158DRAFT_2270at 433.096 kb on - strand, within B158DRAFT_2270at 433.101 kb on - strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.128 kb on + strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.145 kb on - strand, within B158DRAFT_2270at 433.235 kb on - strandat 433.279 kb on - strandat 433.292 kb on - strandat 433.324 kb on + strandat 433.332 kb on - strandat 433.383 kb on + strandat 433.450 kb on + strandat 433.450 kb on + strandat 433.458 kb on - strandat 433.458 kb on - strandat 433.480 kb on + strandat 433.480 kb on + strandat 433.480 kb on + strandat 433.488 kb on - strandat 433.488 kb on - strandat 433.488 kb on - strandat 433.506 kb on + strandat 433.508 kb on + strandat 433.508 kb on + strandat 433.516 kb on - strandat 433.516 kb on - strandat 433.516 kb on - strandat 433.516 kb on - strandat 433.533 kb on + strandat 433.541 kb on - strandat 433.631 kb on + strand, within B158DRAFT_2271at 433.641 kb on - strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.778 kb on - strand, within B158DRAFT_2271at 433.912 kb on + strand, within B158DRAFT_2271at 433.946 kb on + strand, within B158DRAFT_2271at 433.946 kb on + strand, within B158DRAFT_2271at 434.014 kb on + strand, within B158DRAFT_2271at 434.212 kb on - strand, within B158DRAFT_2271at 434.212 kb on - strand, within B158DRAFT_2271at 434.256 kb on + strand, within B158DRAFT_2271at 434.256 kb on + strand, within B158DRAFT_2271at 434.264 kb on - strand, within B158DRAFT_2271at 434.268 kb on + strand, within B158DRAFT_2271at 434.288 kb on + strand, within B158DRAFT_2271at 434.296 kb on - strand, within B158DRAFT_2271at 434.360 kb on - strand, within B158DRAFT_2271at 434.385 kb on - strand, within B158DRAFT_2271at 434.409 kb on + strand, within B158DRAFT_2271at 434.417 kb on - strand, within B158DRAFT_2271at 434.417 kb on - strand, within B158DRAFT_2271at 434.465 kb on + strand, within B158DRAFT_2271at 434.515 kb on - strand, within B158DRAFT_2271at 434.523 kb on + strand, within B158DRAFT_2271at 434.523 kb on + strand, within B158DRAFT_2271at 434.523 kb on + strand, within B158DRAFT_2271at 434.525 kb on + strand, within B158DRAFT_2271at 434.531 kb on - strand, within B158DRAFT_2271at 434.552 kb on + strand, within B158DRAFT_2271at 434.552 kb on + strand, within B158DRAFT_2271at 434.552 kb on + strand, within B158DRAFT_2271at 434.560 kb on - strand, within B158DRAFT_2271at 434.560 kb on - strand, within B158DRAFT_2271at 434.560 kb on - strand, within B158DRAFT_2271at 434.560 kb on - strand, within B158DRAFT_2271at 434.560 kb on - strand, within B158DRAFT_2271at 434.568 kb on - strand, within B158DRAFT_2271at 434.600 kb on + strand, within B158DRAFT_2271at 434.640 kb on + strand, within B158DRAFT_2271at 434.640 kb on + strand, within B158DRAFT_2271at 434.640 kb on + strand, within B158DRAFT_2271at 434.640 kb on + strand, within B158DRAFT_2271at 434.648 kb on - strandat 434.648 kb on - strandat 434.648 kb on - strandat 434.648 kb on - strandat 434.719 kb on - strandat 434.719 kb on - strandat 434.839 kb on + strandat 434.917 kb on + strandat 434.974 kb on + strandat 435.102 kb on - strandat 435.102 kb on - strandat 435.108 kb on - strandat 435.137 kb on - strand, within B158DRAFT_2272at 435.218 kb on + strand, within B158DRAFT_2272at 435.219 kb on - strand, within B158DRAFT_2272at 435.226 kb on - strand, within B158DRAFT_2272at 435.261 kb on - strand, within B158DRAFT_2272at 435.261 kb on - strand, within B158DRAFT_2272at 435.285 kb on + strand, within B158DRAFT_2272at 435.285 kb on + strand, within B158DRAFT_2272at 435.285 kb on + strand, within B158DRAFT_2272at 435.287 kb on - strand, within B158DRAFT_2272at 435.288 kb on - strand, within B158DRAFT_2272at 435.301 kb on + strand, within B158DRAFT_2272at 435.301 kb on + strand, within B158DRAFT_2272at 435.381 kb on + strand, within B158DRAFT_2272at 435.388 kb on + strand, within B158DRAFT_2272at 435.388 kb on + strand, within B158DRAFT_2272at 435.388 kb on + strand, within B158DRAFT_2272at 435.428 kb on + strand, within B158DRAFT_2272at 435.428 kb on + strand, within B158DRAFT_2272at 435.428 kb on + strand, within B158DRAFT_2272at 435.428 kb on + strand, within B158DRAFT_2272at 435.436 kb on - strand, within B158DRAFT_2272at 435.462 kb on + strand, within B158DRAFT_2272at 435.497 kb on + strand, within B158DRAFT_2272at 435.505 kb on - strand, within B158DRAFT_2272at 435.507 kb on - strand, within B158DRAFT_2272at 435.559 kb on + strand, within B158DRAFT_2272at 435.679 kb on + strand, within B158DRAFT_2272at 435.679 kb on + strand, within B158DRAFT_2272at 435.702 kb on + strand, within B158DRAFT_2272at 435.710 kb on - strand, within B158DRAFT_2272at 435.710 kb on - strand, within B158DRAFT_2272at 435.710 kb on - strand, within B158DRAFT_2272at 435.729 kb on - strand, within B158DRAFT_2272

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml
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432,647 + B158DRAFT_2270 0.27 -0.2
432,706 + B158DRAFT_2270 0.34 -0.4
432,706 + B158DRAFT_2270 0.34 -0.1
432,742 + B158DRAFT_2270 0.38 -0.5
432,742 + B158DRAFT_2270 0.38 -0.0
432,742 + B158DRAFT_2270 0.38 -0.4
432,750 - B158DRAFT_2270 0.39 -0.6
432,750 - B158DRAFT_2270 0.39 -0.2
432,750 - B158DRAFT_2270 0.39 +0.1
432,750 - B158DRAFT_2270 0.39 -0.9
432,752 + B158DRAFT_2270 0.40 -0.5
432,791 + B158DRAFT_2270 0.44 -2.2
432,801 + B158DRAFT_2270 0.45 -0.3
432,809 - B158DRAFT_2270 0.46 -0.4
432,809 - B158DRAFT_2270 0.46 -0.8
432,809 - B158DRAFT_2270 0.46 -0.4
432,811 - B158DRAFT_2270 0.47 -0.4
432,811 - B158DRAFT_2270 0.47 -1.0
432,832 + B158DRAFT_2270 0.49 -0.5
432,832 + B158DRAFT_2270 0.49 -0.2
432,832 + B158DRAFT_2270 0.49 -0.4
432,832 + B158DRAFT_2270 0.49 -0.2
432,840 - B158DRAFT_2270 0.50 -0.2
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 -0.1
432,840 - B158DRAFT_2270 0.50 -0.3
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 -0.5
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 +0.0
432,848 - B158DRAFT_2270 0.51 -0.4
432,869 + B158DRAFT_2270 0.54 -0.3
432,869 + B158DRAFT_2270 0.54 -1.0
432,869 + B158DRAFT_2270 0.54 -0.6
432,877 - B158DRAFT_2270 0.55 +0.2
432,952 + B158DRAFT_2270 0.63 -0.5
432,960 - B158DRAFT_2270 0.64 -0.6
432,960 - B158DRAFT_2270 0.64 -0.6
433,096 - B158DRAFT_2270 0.81 -0.5
433,101 - B158DRAFT_2270 0.81 -0.8
433,123 + B158DRAFT_2270 0.84 -0.8
433,123 + B158DRAFT_2270 0.84 -1.2
433,123 + B158DRAFT_2270 0.84 -0.3
433,128 + B158DRAFT_2270 0.84 +0.6
433,131 - B158DRAFT_2270 0.85 -1.1
433,131 - B158DRAFT_2270 0.85 -0.4
433,131 - B158DRAFT_2270 0.85 -0.6
433,145 - B158DRAFT_2270 0.86 -0.7
433,235 - +0.3
433,279 - +0.0
433,292 - -0.0
433,324 + -0.1
433,332 - -0.1
433,383 + -0.6
433,450 + -0.7
433,450 + -0.2
433,458 - -0.1
433,458 - +0.4
433,480 + -0.0
433,480 + +0.4
433,480 + -0.2
433,488 - -0.3
433,488 - -0.0
433,488 - -0.1
433,506 + +0.0
433,508 + +0.4
433,508 + +0.3
433,516 - -0.1
433,516 - +0.2
433,516 - -0.1
433,516 - +0.2
433,533 + +0.4
433,541 - -0.1
433,631 + B158DRAFT_2271 0.15 +0.1
433,641 - B158DRAFT_2271 0.16 -0.1
433,695 + B158DRAFT_2271 0.20 +0.3
433,695 + B158DRAFT_2271 0.20 -0.2
433,695 + B158DRAFT_2271 0.20 -0.4
433,695 + B158DRAFT_2271 0.20 -0.3
433,695 + B158DRAFT_2271 0.20 +0.0
433,695 + B158DRAFT_2271 0.20 -0.1
433,695 + B158DRAFT_2271 0.20 -0.1
433,703 - B158DRAFT_2271 0.20 -0.1
433,703 - B158DRAFT_2271 0.20 -0.2
433,703 - B158DRAFT_2271 0.20 +0.4
433,703 - B158DRAFT_2271 0.20 -0.3
433,703 - B158DRAFT_2271 0.20 -0.1
433,703 - B158DRAFT_2271 0.20 -0.1
433,703 - B158DRAFT_2271 0.20 -0.1
433,778 - B158DRAFT_2271 0.26 -0.9
433,912 + B158DRAFT_2271 0.36 +0.3
433,946 + B158DRAFT_2271 0.38 -0.1
433,946 + B158DRAFT_2271 0.38 +0.0
434,014 + B158DRAFT_2271 0.43 +0.2
434,212 - B158DRAFT_2271 0.58 -0.5
434,212 - B158DRAFT_2271 0.58 -0.0
434,256 + B158DRAFT_2271 0.61 -0.5
434,256 + B158DRAFT_2271 0.61 -0.4
434,264 - B158DRAFT_2271 0.62 -0.6
434,268 + B158DRAFT_2271 0.62 +0.1
434,288 + B158DRAFT_2271 0.64 -0.1
434,296 - B158DRAFT_2271 0.64 -0.1
434,360 - B158DRAFT_2271 0.69 -0.2
434,385 - B158DRAFT_2271 0.71 -0.2
434,409 + B158DRAFT_2271 0.73 -0.1
434,417 - B158DRAFT_2271 0.73 -0.4
434,417 - B158DRAFT_2271 0.73 +0.1
434,465 + B158DRAFT_2271 0.77 +0.1
434,515 - B158DRAFT_2271 0.81 -0.4
434,523 + B158DRAFT_2271 0.81 -0.3
434,523 + B158DRAFT_2271 0.81 -0.1
434,523 + B158DRAFT_2271 0.81 -0.0
434,525 + B158DRAFT_2271 0.81 -0.1
434,531 - B158DRAFT_2271 0.82 +0.0
434,552 + B158DRAFT_2271 0.83 -0.3
434,552 + B158DRAFT_2271 0.83 -0.4
434,552 + B158DRAFT_2271 0.83 -0.3
434,560 - B158DRAFT_2271 0.84 +0.2
434,560 - B158DRAFT_2271 0.84 -0.2
434,560 - B158DRAFT_2271 0.84 +0.9
434,560 - B158DRAFT_2271 0.84 +0.0
434,560 - B158DRAFT_2271 0.84 +0.3
434,568 - B158DRAFT_2271 0.85 +0.5
434,600 + B158DRAFT_2271 0.87 -0.2
434,640 + B158DRAFT_2271 0.90 -0.2
434,640 + B158DRAFT_2271 0.90 +0.1
434,640 + B158DRAFT_2271 0.90 +0.2
434,640 + B158DRAFT_2271 0.90 -0.5
434,648 - -0.7
434,648 - -0.5
434,648 - -0.4
434,648 - +0.1
434,719 - -0.7
434,719 - -0.0
434,839 + -0.2
434,917 + -0.9
434,974 + -0.7
435,102 - -0.9
435,102 - -0.5
435,108 - -1.1
435,137 - B158DRAFT_2272 0.10 -0.5
435,218 + B158DRAFT_2272 0.13 -1.1
435,219 - B158DRAFT_2272 0.13 -1.0
435,226 - B158DRAFT_2272 0.14 -0.5
435,261 - B158DRAFT_2272 0.15 -0.3
435,261 - B158DRAFT_2272 0.15 -0.5
435,285 + B158DRAFT_2272 0.16 -0.7
435,285 + B158DRAFT_2272 0.16 -0.2
435,285 + B158DRAFT_2272 0.16 -0.7
435,287 - B158DRAFT_2272 0.16 -0.6
435,288 - B158DRAFT_2272 0.16 -0.5
435,301 + B158DRAFT_2272 0.16 -0.6
435,301 + B158DRAFT_2272 0.16 -0.8
435,381 + B158DRAFT_2272 0.19 -1.1
435,388 + B158DRAFT_2272 0.19 -0.4
435,388 + B158DRAFT_2272 0.19 -0.3
435,388 + B158DRAFT_2272 0.19 -0.5
435,428 + B158DRAFT_2272 0.21 -1.0
435,428 + B158DRAFT_2272 0.21 -1.1
435,428 + B158DRAFT_2272 0.21 -0.8
435,428 + B158DRAFT_2272 0.21 -0.6
435,436 - B158DRAFT_2272 0.21 -0.7
435,462 + B158DRAFT_2272 0.22 -0.3
435,497 + B158DRAFT_2272 0.23 -0.7
435,505 - B158DRAFT_2272 0.23 -0.6
435,507 - B158DRAFT_2272 0.23 -0.2
435,559 + B158DRAFT_2272 0.25 -0.7
435,679 + B158DRAFT_2272 0.29 -0.6
435,679 + B158DRAFT_2272 0.29 -0.2
435,702 + B158DRAFT_2272 0.30 -0.6
435,710 - B158DRAFT_2272 0.31 -0.5
435,710 - B158DRAFT_2272 0.31 +0.5
435,710 - B158DRAFT_2272 0.31 -0.5
435,729 - B158DRAFT_2272 0.31 -1.1

Or see this region's nucleotide sequence