Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2269

Experiment: m.b. Spectinomycin 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2268 and B158DRAFT_2269 are separated by 29 nucleotidesB158DRAFT_2269 and B158DRAFT_2270 are separated by 191 nucleotides B158DRAFT_2268: B158DRAFT_2268 - single-stranded-DNA-specific exonuclease RecJ, at 430,051 to 431,778 _2268 B158DRAFT_2269: B158DRAFT_2269 - hypothetical protein, at 431,808 to 432,227 _2269 B158DRAFT_2270: B158DRAFT_2270 - Small-conductance mechanosensitive channel, at 432,419 to 433,258 _2270 Position (kb) 431 432 433Strain fitness (log2 ratio) -3 -2 -1 0 1at 430.811 kb on - strand, within B158DRAFT_2268at 430.811 kb on - strand, within B158DRAFT_2268at 430.813 kb on + strand, within B158DRAFT_2268at 430.813 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.911 kb on + strand, within B158DRAFT_2268at 430.919 kb on - strand, within B158DRAFT_2268at 430.919 kb on - strand, within B158DRAFT_2268at 430.936 kb on + strand, within B158DRAFT_2268at 430.971 kb on + strand, within B158DRAFT_2268at 430.971 kb on + strand, within B158DRAFT_2268at 430.979 kb on - strand, within B158DRAFT_2268at 431.021 kb on - strand, within B158DRAFT_2268at 431.046 kb on - strand, within B158DRAFT_2268at 431.052 kb on + strand, within B158DRAFT_2268at 431.060 kb on - strand, within B158DRAFT_2268at 431.091 kb on - strand, within B158DRAFT_2268at 431.093 kb on + strand, within B158DRAFT_2268at 431.195 kb on + strand, within B158DRAFT_2268at 431.215 kb on + strand, within B158DRAFT_2268at 431.215 kb on + strand, within B158DRAFT_2268at 431.217 kb on + strand, within B158DRAFT_2268at 431.223 kb on - strand, within B158DRAFT_2268at 431.223 kb on - strand, within B158DRAFT_2268at 431.223 kb on - strand, within B158DRAFT_2268at 431.234 kb on - strand, within B158DRAFT_2268at 431.241 kb on - strand, within B158DRAFT_2268at 431.254 kb on + strand, within B158DRAFT_2268at 431.255 kb on - strand, within B158DRAFT_2268at 431.270 kb on - strand, within B158DRAFT_2268at 431.349 kb on - strand, within B158DRAFT_2268at 431.409 kb on + strand, within B158DRAFT_2268at 431.409 kb on + strand, within B158DRAFT_2268at 431.409 kb on + strand, within B158DRAFT_2268at 431.409 kb on + strand, within B158DRAFT_2268at 431.417 kb on - strand, within B158DRAFT_2268at 431.417 kb on - strand, within B158DRAFT_2268at 431.417 kb on - strand, within B158DRAFT_2268at 431.420 kb on + strand, within B158DRAFT_2268at 431.431 kb on - strand, within B158DRAFT_2268at 431.454 kb on + strand, within B158DRAFT_2268at 431.454 kb on + strand, within B158DRAFT_2268at 431.459 kb on + strand, within B158DRAFT_2268at 431.481 kb on - strand, within B158DRAFT_2268at 431.481 kb on - strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.491 kb on - strand, within B158DRAFT_2268at 431.491 kb on - strand, within B158DRAFT_2268at 431.544 kb on - strand, within B158DRAFT_2268at 431.609 kb on + strandat 431.617 kb on - strandat 431.634 kb on + strandat 431.642 kb on - strandat 431.642 kb on - strandat 431.656 kb on + strandat 431.688 kb on + strandat 431.688 kb on + strandat 431.696 kb on - strandat 431.696 kb on - strandat 431.731 kb on + strandat 431.767 kb on + strandat 431.775 kb on - strandat 431.798 kb on + strandat 431.798 kb on + strandat 431.798 kb on + strandat 431.798 kb on + strandat 431.806 kb on - strandat 431.843 kb on + strandat 431.849 kb on - strandat 431.888 kb on + strand, within B158DRAFT_2269at 431.901 kb on - strand, within B158DRAFT_2269at 431.903 kb on + strand, within B158DRAFT_2269at 431.939 kb on + strand, within B158DRAFT_2269at 431.992 kb on - strand, within B158DRAFT_2269at 432.032 kb on - strand, within B158DRAFT_2269at 432.034 kb on + strand, within B158DRAFT_2269at 432.034 kb on + strand, within B158DRAFT_2269at 432.034 kb on + strand, within B158DRAFT_2269at 432.039 kb on + strand, within B158DRAFT_2269at 432.042 kb on - strand, within B158DRAFT_2269at 432.042 kb on - strand, within B158DRAFT_2269at 432.047 kb on - strand, within B158DRAFT_2269at 432.047 kb on - strand, within B158DRAFT_2269at 432.076 kb on + strand, within B158DRAFT_2269at 432.076 kb on + strand, within B158DRAFT_2269at 432.084 kb on - strand, within B158DRAFT_2269at 432.084 kb on - strand, within B158DRAFT_2269at 432.084 kb on - strand, within B158DRAFT_2269at 432.154 kb on - strand, within B158DRAFT_2269at 432.182 kb on + strand, within B158DRAFT_2269at 432.182 kb on + strand, within B158DRAFT_2269at 432.190 kb on - strandat 432.190 kb on - strandat 432.191 kb on - strandat 432.233 kb on - strandat 432.647 kb on + strand, within B158DRAFT_2270at 432.706 kb on + strand, within B158DRAFT_2270at 432.706 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.752 kb on + strand, within B158DRAFT_2270at 432.791 kb on + strand, within B158DRAFT_2270at 432.801 kb on + strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.811 kb on - strand, within B158DRAFT_2270at 432.811 kb on - strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.848 kb on - strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.877 kb on - strand, within B158DRAFT_2270at 432.952 kb on + strand, within B158DRAFT_2270at 432.960 kb on - strand, within B158DRAFT_2270at 432.960 kb on - strand, within B158DRAFT_2270at 433.096 kb on - strand, within B158DRAFT_2270at 433.101 kb on - strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.128 kb on + strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.145 kb on - strand, within B158DRAFT_2270

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml
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430,811 - B158DRAFT_2268 0.44 -1.0
430,811 - B158DRAFT_2268 0.44 -1.8
430,813 + B158DRAFT_2268 0.44 +0.1
430,813 + B158DRAFT_2268 0.44 -1.5
430,885 + B158DRAFT_2268 0.48 -0.9
430,885 + B158DRAFT_2268 0.48 -2.3
430,885 + B158DRAFT_2268 0.48 -3.1
430,885 + B158DRAFT_2268 0.48 -1.0
430,885 + B158DRAFT_2268 0.48 -1.8
430,885 + B158DRAFT_2268 0.48 -0.9
430,885 + B158DRAFT_2268 0.48 -1.7
430,885 + B158DRAFT_2268 0.48 -1.8
430,885 + B158DRAFT_2268 0.48 +0.2
430,893 - B158DRAFT_2268 0.49 -1.4
430,893 - B158DRAFT_2268 0.49 -1.5
430,893 - B158DRAFT_2268 0.49 -1.0
430,893 - B158DRAFT_2268 0.49 -1.4
430,893 - B158DRAFT_2268 0.49 -1.3
430,911 + B158DRAFT_2268 0.50 -1.8
430,919 - B158DRAFT_2268 0.50 -1.0
430,919 - B158DRAFT_2268 0.50 -1.4
430,936 + B158DRAFT_2268 0.51 -1.2
430,971 + B158DRAFT_2268 0.53 +0.2
430,971 + B158DRAFT_2268 0.53 -3.3
430,979 - B158DRAFT_2268 0.54 -1.1
431,021 - B158DRAFT_2268 0.56 -1.5
431,046 - B158DRAFT_2268 0.58 -1.6
431,052 + B158DRAFT_2268 0.58 -1.1
431,060 - B158DRAFT_2268 0.58 -0.1
431,091 - B158DRAFT_2268 0.60 -1.8
431,093 + B158DRAFT_2268 0.60 -1.1
431,195 + B158DRAFT_2268 0.66 -1.9
431,215 + B158DRAFT_2268 0.67 -2.4
431,215 + B158DRAFT_2268 0.67 -2.4
431,217 + B158DRAFT_2268 0.67 -1.3
431,223 - B158DRAFT_2268 0.68 +0.5
431,223 - B158DRAFT_2268 0.68 -1.9
431,223 - B158DRAFT_2268 0.68 -1.4
431,234 - B158DRAFT_2268 0.68 -1.4
431,241 - B158DRAFT_2268 0.69 -0.8
431,254 + B158DRAFT_2268 0.70 -1.2
431,255 - B158DRAFT_2268 0.70 -0.1
431,270 - B158DRAFT_2268 0.71 -1.4
431,349 - B158DRAFT_2268 0.75 -2.0
431,409 + B158DRAFT_2268 0.79 -1.4
431,409 + B158DRAFT_2268 0.79 -2.2
431,409 + B158DRAFT_2268 0.79 -1.6
431,409 + B158DRAFT_2268 0.79 -1.4
431,417 - B158DRAFT_2268 0.79 -1.0
431,417 - B158DRAFT_2268 0.79 -2.0
431,417 - B158DRAFT_2268 0.79 -1.5
431,420 + B158DRAFT_2268 0.79 -1.8
431,431 - B158DRAFT_2268 0.80 -2.0
431,454 + B158DRAFT_2268 0.81 -1.7
431,454 + B158DRAFT_2268 0.81 -0.7
431,459 + B158DRAFT_2268 0.81 -2.1
431,481 - B158DRAFT_2268 0.83 -1.9
431,481 - B158DRAFT_2268 0.83 -1.4
431,483 + B158DRAFT_2268 0.83 -1.3
431,483 + B158DRAFT_2268 0.83 -1.8
431,483 + B158DRAFT_2268 0.83 -0.7
431,483 + B158DRAFT_2268 0.83 -1.3
431,491 - B158DRAFT_2268 0.83 -1.7
431,491 - B158DRAFT_2268 0.83 -1.3
431,544 - B158DRAFT_2268 0.86 -1.7
431,609 + -1.7
431,617 - -0.8
431,634 + -1.1
431,642 - -2.0
431,642 - -1.6
431,656 + -1.7
431,688 + -1.1
431,688 + -0.6
431,696 - -0.9
431,696 - -1.8
431,731 + -1.2
431,767 + -0.0
431,775 - +0.1
431,798 + +0.1
431,798 + -0.1
431,798 + -0.1
431,798 + -0.7
431,806 - +0.2
431,843 + -0.0
431,849 - -0.1
431,888 + B158DRAFT_2269 0.19 +0.1
431,901 - B158DRAFT_2269 0.22 -0.4
431,903 + B158DRAFT_2269 0.23 -0.9
431,939 + B158DRAFT_2269 0.31 +0.2
431,992 - B158DRAFT_2269 0.44 -0.2
432,032 - B158DRAFT_2269 0.53 -0.2
432,034 + B158DRAFT_2269 0.54 +0.1
432,034 + B158DRAFT_2269 0.54 -0.3
432,034 + B158DRAFT_2269 0.54 -0.3
432,039 + B158DRAFT_2269 0.55 -0.2
432,042 - B158DRAFT_2269 0.56 +0.1
432,042 - B158DRAFT_2269 0.56 -0.5
432,047 - B158DRAFT_2269 0.57 -0.4
432,047 - B158DRAFT_2269 0.57 -0.3
432,076 + B158DRAFT_2269 0.64 -0.4
432,076 + B158DRAFT_2269 0.64 -0.2
432,084 - B158DRAFT_2269 0.66 -0.2
432,084 - B158DRAFT_2269 0.66 +0.8
432,084 - B158DRAFT_2269 0.66 -0.0
432,154 - B158DRAFT_2269 0.82 +0.1
432,182 + B158DRAFT_2269 0.89 +1.0
432,182 + B158DRAFT_2269 0.89 -0.1
432,190 - -0.0
432,190 - +0.4
432,191 - -0.1
432,233 - -0.0
432,647 + B158DRAFT_2270 0.27 -0.2
432,706 + B158DRAFT_2270 0.34 -0.4
432,706 + B158DRAFT_2270 0.34 -0.1
432,742 + B158DRAFT_2270 0.38 -0.5
432,742 + B158DRAFT_2270 0.38 -0.0
432,742 + B158DRAFT_2270 0.38 -0.4
432,750 - B158DRAFT_2270 0.39 -0.6
432,750 - B158DRAFT_2270 0.39 -0.2
432,750 - B158DRAFT_2270 0.39 +0.1
432,750 - B158DRAFT_2270 0.39 -0.9
432,752 + B158DRAFT_2270 0.40 -0.5
432,791 + B158DRAFT_2270 0.44 -2.2
432,801 + B158DRAFT_2270 0.45 -0.3
432,809 - B158DRAFT_2270 0.46 -0.4
432,809 - B158DRAFT_2270 0.46 -0.8
432,809 - B158DRAFT_2270 0.46 -0.4
432,811 - B158DRAFT_2270 0.47 -0.4
432,811 - B158DRAFT_2270 0.47 -1.0
432,832 + B158DRAFT_2270 0.49 -0.5
432,832 + B158DRAFT_2270 0.49 -0.2
432,832 + B158DRAFT_2270 0.49 -0.4
432,832 + B158DRAFT_2270 0.49 -0.2
432,840 - B158DRAFT_2270 0.50 -0.2
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 -0.1
432,840 - B158DRAFT_2270 0.50 -0.3
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 -0.5
432,840 - B158DRAFT_2270 0.50 -0.4
432,840 - B158DRAFT_2270 0.50 +0.0
432,848 - B158DRAFT_2270 0.51 -0.4
432,869 + B158DRAFT_2270 0.54 -0.3
432,869 + B158DRAFT_2270 0.54 -1.0
432,869 + B158DRAFT_2270 0.54 -0.6
432,877 - B158DRAFT_2270 0.55 +0.2
432,952 + B158DRAFT_2270 0.63 -0.5
432,960 - B158DRAFT_2270 0.64 -0.6
432,960 - B158DRAFT_2270 0.64 -0.6
433,096 - B158DRAFT_2270 0.81 -0.5
433,101 - B158DRAFT_2270 0.81 -0.8
433,123 + B158DRAFT_2270 0.84 -0.8
433,123 + B158DRAFT_2270 0.84 -1.2
433,123 + B158DRAFT_2270 0.84 -0.3
433,128 + B158DRAFT_2270 0.84 +0.6
433,131 - B158DRAFT_2270 0.85 -1.1
433,131 - B158DRAFT_2270 0.85 -0.4
433,131 - B158DRAFT_2270 0.85 -0.6
433,145 - B158DRAFT_2270 0.86 -0.7

Or see this region's nucleotide sequence