Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2267

Experiment: m.b. Spectinomycin 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2266 and B158DRAFT_2267 are separated by 97 nucleotidesB158DRAFT_2267 and B158DRAFT_2268 are separated by 92 nucleotides B158DRAFT_2266: B158DRAFT_2266 - Protein-disulfide isomerase, at 428,734 to 429,492 _2266 B158DRAFT_2267: B158DRAFT_2267 - Uncharacterized conserved protein, at 429,590 to 429,958 _2267 B158DRAFT_2268: B158DRAFT_2268 - single-stranded-DNA-specific exonuclease RecJ, at 430,051 to 431,778 _2268 Position (kb) 429 430Strain fitness (log2 ratio) -3 -2 -1 0 1at 428.607 kb on + strandat 428.801 kb on - strandat 428.868 kb on + strand, within B158DRAFT_2266at 428.889 kb on + strand, within B158DRAFT_2266at 429.070 kb on + strand, within B158DRAFT_2266at 429.234 kb on - strand, within B158DRAFT_2266at 429.252 kb on + strand, within B158DRAFT_2266at 429.267 kb on - strand, within B158DRAFT_2266at 429.352 kb on + strand, within B158DRAFT_2266at 429.469 kb on - strandat 429.479 kb on - strandat 429.505 kb on - strandat 429.516 kb on - strandat 429.535 kb on + strandat 429.538 kb on - strandat 429.594 kb on + strandat 429.594 kb on + strandat 429.596 kb on + strandat 429.597 kb on - strandat 429.600 kb on + strandat 429.602 kb on - strandat 429.607 kb on - strandat 429.613 kb on - strandat 429.618 kb on - strandat 429.639 kb on + strand, within B158DRAFT_2267at 429.663 kb on - strand, within B158DRAFT_2267at 429.671 kb on - strand, within B158DRAFT_2267at 429.700 kb on - strand, within B158DRAFT_2267at 429.733 kb on + strand, within B158DRAFT_2267at 429.784 kb on + strand, within B158DRAFT_2267at 429.784 kb on - strand, within B158DRAFT_2267at 429.834 kb on + strand, within B158DRAFT_2267at 429.924 kb on - strandat 429.935 kb on + strandat 429.936 kb on + strandat 429.936 kb on + strandat 429.944 kb on - strandat 429.944 kb on - strandat 429.944 kb on - strandat 429.944 kb on - strandat 429.974 kb on + strandat 429.974 kb on + strandat 429.974 kb on + strandat 429.982 kb on - strandat 429.982 kb on - strandat 429.982 kb on - strandat 429.982 kb on - strandat 429.982 kb on - strandat 429.982 kb on - strandat 430.099 kb on + strandat 430.103 kb on + strandat 430.133 kb on - strandat 430.133 kb on - strandat 430.133 kb on - strandat 430.142 kb on + strandat 430.142 kb on + strandat 430.142 kb on + strandat 430.150 kb on - strandat 430.150 kb on - strandat 430.150 kb on - strandat 430.159 kb on + strandat 430.219 kb on + strandat 430.389 kb on - strand, within B158DRAFT_2268at 430.395 kb on - strand, within B158DRAFT_2268at 430.422 kb on + strand, within B158DRAFT_2268at 430.476 kb on + strand, within B158DRAFT_2268at 430.476 kb on + strand, within B158DRAFT_2268at 430.476 kb on + strand, within B158DRAFT_2268at 430.484 kb on - strand, within B158DRAFT_2268at 430.532 kb on - strand, within B158DRAFT_2268at 430.671 kb on - strand, within B158DRAFT_2268at 430.688 kb on + strand, within B158DRAFT_2268at 430.688 kb on + strand, within B158DRAFT_2268at 430.696 kb on - strand, within B158DRAFT_2268at 430.696 kb on - strand, within B158DRAFT_2268at 430.696 kb on - strand, within B158DRAFT_2268at 430.757 kb on + strand, within B158DRAFT_2268at 430.803 kb on + strand, within B158DRAFT_2268at 430.811 kb on - strand, within B158DRAFT_2268at 430.811 kb on - strand, within B158DRAFT_2268at 430.813 kb on + strand, within B158DRAFT_2268at 430.813 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.885 kb on + strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.893 kb on - strand, within B158DRAFT_2268at 430.911 kb on + strand, within B158DRAFT_2268at 430.919 kb on - strand, within B158DRAFT_2268at 430.919 kb on - strand, within B158DRAFT_2268at 430.936 kb on + strand, within B158DRAFT_2268

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml
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428,607 + -0.1
428,801 - -1.0
428,868 + B158DRAFT_2266 0.18 -0.9
428,889 + B158DRAFT_2266 0.20 -0.6
429,070 + B158DRAFT_2266 0.44 -0.2
429,234 - B158DRAFT_2266 0.66 -0.3
429,252 + B158DRAFT_2266 0.68 -0.7
429,267 - B158DRAFT_2266 0.70 -1.1
429,352 + B158DRAFT_2266 0.81 -1.5
429,469 - -1.6
429,479 - -0.6
429,505 - -0.1
429,516 - -0.4
429,535 + -0.2
429,538 - +0.7
429,594 + -1.3
429,594 + -0.3
429,596 + -0.3
429,597 - +0.3
429,600 + -0.8
429,602 - +0.2
429,607 - -0.3
429,613 - -0.5
429,618 - -0.9
429,639 + B158DRAFT_2267 0.13 -0.5
429,663 - B158DRAFT_2267 0.20 -0.5
429,671 - B158DRAFT_2267 0.22 +0.1
429,700 - B158DRAFT_2267 0.30 -0.5
429,733 + B158DRAFT_2267 0.39 -0.2
429,784 + B158DRAFT_2267 0.53 -0.6
429,784 - B158DRAFT_2267 0.53 -0.7
429,834 + B158DRAFT_2267 0.66 -0.1
429,924 - +0.3
429,935 + -0.7
429,936 + -0.4
429,936 + -0.3
429,944 - +0.2
429,944 - +0.3
429,944 - +0.5
429,944 - -0.2
429,974 + -0.3
429,974 + -0.2
429,974 + -0.8
429,982 - -0.2
429,982 - -0.3
429,982 - -0.0
429,982 - -0.2
429,982 - +0.2
429,982 - -0.6
430,099 + -1.6
430,103 + -1.1
430,133 - -2.0
430,133 - -2.2
430,133 - -1.8
430,142 + -0.8
430,142 + +0.9
430,142 + -1.0
430,150 - -1.0
430,150 - -0.5
430,150 - -1.7
430,159 + -2.5
430,219 + -0.9
430,389 - B158DRAFT_2268 0.20 -1.4
430,395 - B158DRAFT_2268 0.20 -2.3
430,422 + B158DRAFT_2268 0.21 -2.0
430,476 + B158DRAFT_2268 0.25 -1.8
430,476 + B158DRAFT_2268 0.25 -1.2
430,476 + B158DRAFT_2268 0.25 -1.5
430,484 - B158DRAFT_2268 0.25 -1.9
430,532 - B158DRAFT_2268 0.28 -2.3
430,671 - B158DRAFT_2268 0.36 -2.0
430,688 + B158DRAFT_2268 0.37 -1.8
430,688 + B158DRAFT_2268 0.37 -1.6
430,696 - B158DRAFT_2268 0.37 -0.0
430,696 - B158DRAFT_2268 0.37 -1.8
430,696 - B158DRAFT_2268 0.37 -3.7
430,757 + B158DRAFT_2268 0.41 -1.7
430,803 + B158DRAFT_2268 0.44 -1.1
430,811 - B158DRAFT_2268 0.44 -1.0
430,811 - B158DRAFT_2268 0.44 -1.8
430,813 + B158DRAFT_2268 0.44 +0.1
430,813 + B158DRAFT_2268 0.44 -1.5
430,885 + B158DRAFT_2268 0.48 -0.9
430,885 + B158DRAFT_2268 0.48 -2.3
430,885 + B158DRAFT_2268 0.48 -3.1
430,885 + B158DRAFT_2268 0.48 -1.0
430,885 + B158DRAFT_2268 0.48 -1.8
430,885 + B158DRAFT_2268 0.48 -0.9
430,885 + B158DRAFT_2268 0.48 -1.7
430,885 + B158DRAFT_2268 0.48 -1.8
430,885 + B158DRAFT_2268 0.48 +0.2
430,893 - B158DRAFT_2268 0.49 -1.4
430,893 - B158DRAFT_2268 0.49 -1.5
430,893 - B158DRAFT_2268 0.49 -1.0
430,893 - B158DRAFT_2268 0.49 -1.4
430,893 - B158DRAFT_2268 0.49 -1.3
430,911 + B158DRAFT_2268 0.50 -1.8
430,919 - B158DRAFT_2268 0.50 -1.0
430,919 - B158DRAFT_2268 0.50 -1.4
430,936 + B158DRAFT_2268 0.51 -1.2

Or see this region's nucleotide sequence