Experiment: m.b. Spectinomycin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2212 and B158DRAFT_2213 overlap by 41 nucleotides B158DRAFT_2213 and B158DRAFT_2214 overlap by 8 nucleotides B158DRAFT_2214 and B158DRAFT_2215 are separated by 104 nucleotides
B158DRAFT_2212: B158DRAFT_2212 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 359,530 to 361,419
_2212
B158DRAFT_2213: B158DRAFT_2213 - hypothetical protein, at 361,379 to 361,987
_2213
B158DRAFT_2214: B158DRAFT_2214 - hypothetical protein, at 361,980 to 362,531
_2214
B158DRAFT_2215: B158DRAFT_2215 - Na+/H+-dicarboxylate symporters, at 362,636 to 363,946
_2215
Position (kb) 361
362
363 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 361.037 kb on + strand, within B158DRAFT_2212 at 361.037 kb on + strand, within B158DRAFT_2212 at 361.038 kb on - strand, within B158DRAFT_2212 at 361.058 kb on - strand, within B158DRAFT_2212 at 361.141 kb on + strand, within B158DRAFT_2212 at 361.141 kb on + strand, within B158DRAFT_2212 at 361.147 kb on - strand, within B158DRAFT_2212 at 361.149 kb on - strand, within B158DRAFT_2212 at 361.149 kb on - strand, within B158DRAFT_2212 at 361.189 kb on + strand, within B158DRAFT_2212 at 361.199 kb on + strand, within B158DRAFT_2212 at 361.204 kb on - strand, within B158DRAFT_2212 at 361.207 kb on - strand, within B158DRAFT_2212 at 361.212 kb on - strand, within B158DRAFT_2212 at 361.238 kb on + strand at 361.259 kb on + strand at 361.267 kb on - strand at 361.267 kb on - strand at 361.277 kb on - strand at 361.325 kb on + strand at 361.333 kb on - strand at 361.463 kb on + strand, within B158DRAFT_2213 at 361.463 kb on + strand, within B158DRAFT_2213 at 361.505 kb on - strand, within B158DRAFT_2213 at 361.525 kb on + strand, within B158DRAFT_2213 at 361.593 kb on - strand, within B158DRAFT_2213 at 361.593 kb on - strand, within B158DRAFT_2213 at 361.636 kb on - strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.638 kb on + strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.646 kb on - strand, within B158DRAFT_2213 at 361.662 kb on + strand, within B158DRAFT_2213 at 361.702 kb on + strand, within B158DRAFT_2213 at 361.710 kb on - strand, within B158DRAFT_2213 at 361.710 kb on - strand, within B158DRAFT_2213 at 361.712 kb on + strand, within B158DRAFT_2213 at 361.712 kb on + strand, within B158DRAFT_2213 at 361.722 kb on - strand, within B158DRAFT_2213 at 361.774 kb on + strand, within B158DRAFT_2213 at 361.791 kb on + strand, within B158DRAFT_2213 at 361.826 kb on - strand, within B158DRAFT_2213 at 361.826 kb on - strand, within B158DRAFT_2213 at 361.871 kb on - strand, within B158DRAFT_2213 at 361.871 kb on - strand, within B158DRAFT_2213 at 362.003 kb on + strand at 362.003 kb on + strand at 362.003 kb on + strand at 362.011 kb on - strand at 362.011 kb on - strand at 362.011 kb on - strand at 362.049 kb on + strand, within B158DRAFT_2214 at 362.110 kb on - strand, within B158DRAFT_2214 at 362.222 kb on + strand, within B158DRAFT_2214 at 362.237 kb on + strand, within B158DRAFT_2214 at 362.238 kb on - strand, within B158DRAFT_2214 at 362.242 kb on + strand, within B158DRAFT_2214 at 362.317 kb on + strand, within B158DRAFT_2214 at 362.318 kb on - strand, within B158DRAFT_2214 at 362.318 kb on - strand, within B158DRAFT_2214 at 362.354 kb on - strand, within B158DRAFT_2214 at 362.452 kb on - strand, within B158DRAFT_2214 at 362.472 kb on + strand, within B158DRAFT_2214 at 362.472 kb on + strand, within B158DRAFT_2214 at 362.472 kb on + strand, within B158DRAFT_2214 at 362.473 kb on + strand, within B158DRAFT_2214 at 362.480 kb on - strand at 362.563 kb on - strand at 362.593 kb on - strand at 362.679 kb on + strand at 362.718 kb on - strand at 362.718 kb on - strand at 362.757 kb on + strand at 362.773 kb on + strand, within B158DRAFT_2215 at 362.819 kb on - strand, within B158DRAFT_2215 at 362.824 kb on - strand, within B158DRAFT_2215 at 362.912 kb on - strand, within B158DRAFT_2215 at 362.929 kb on + strand, within B158DRAFT_2215 at 362.929 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on + strand, within B158DRAFT_2215 at 362.937 kb on - strand, within B158DRAFT_2215 at 362.937 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.945 kb on - strand, within B158DRAFT_2215 at 362.950 kb on - strand, within B158DRAFT_2215 at 362.964 kb on + strand, within B158DRAFT_2215 at 362.972 kb on - strand, within B158DRAFT_2215 at 362.972 kb on - strand, within B158DRAFT_2215 at 362.985 kb on + strand, within B158DRAFT_2215 at 363.019 kb on + strand, within B158DRAFT_2215 at 363.019 kb on + strand, within B158DRAFT_2215 at 363.021 kb on - strand, within B158DRAFT_2215 at 363.033 kb on + strand, within B158DRAFT_2215 at 363.046 kb on + strand, within B158DRAFT_2215 at 363.075 kb on + strand, within B158DRAFT_2215 at 363.119 kb on + strand, within B158DRAFT_2215 at 363.127 kb on - strand, within B158DRAFT_2215 at 363.127 kb on - strand, within B158DRAFT_2215 at 363.138 kb on + strand, within B158DRAFT_2215 at 363.195 kb on - strand, within B158DRAFT_2215 at 363.355 kb on - strand, within B158DRAFT_2215 at 363.496 kb on + strand, within B158DRAFT_2215 at 363.496 kb on + strand, within B158DRAFT_2215
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml remove 361,037 + B158DRAFT_2212 0.80 -0.4 361,037 + B158DRAFT_2212 0.80 -0.2 361,038 - B158DRAFT_2212 0.80 -0.1 361,058 - B158DRAFT_2212 0.81 -0.6 361,141 + B158DRAFT_2212 0.85 +0.3 361,141 + B158DRAFT_2212 0.85 -0.5 361,147 - B158DRAFT_2212 0.86 -0.5 361,149 - B158DRAFT_2212 0.86 -0.6 361,149 - B158DRAFT_2212 0.86 +0.1 361,189 + B158DRAFT_2212 0.88 -0.1 361,199 + B158DRAFT_2212 0.88 -0.2 361,204 - B158DRAFT_2212 0.89 -0.8 361,207 - B158DRAFT_2212 0.89 +0.2 361,212 - B158DRAFT_2212 0.89 -0.7 361,238 + -0.4 361,259 + +0.1 361,267 - +0.7 361,267 - -0.4 361,277 - -0.1 361,325 + -0.7 361,333 - -0.2 361,463 + B158DRAFT_2213 0.14 -0.3 361,463 + B158DRAFT_2213 0.14 -0.1 361,505 - B158DRAFT_2213 0.21 -0.3 361,525 + B158DRAFT_2213 0.24 +0.0 361,593 - B158DRAFT_2213 0.35 -0.0 361,593 - B158DRAFT_2213 0.35 +0.3 361,636 - B158DRAFT_2213 0.42 -0.4 361,638 + B158DRAFT_2213 0.43 +0.1 361,638 + B158DRAFT_2213 0.43 -0.0 361,638 + B158DRAFT_2213 0.43 -0.3 361,638 + B158DRAFT_2213 0.43 +0.0 361,638 + B158DRAFT_2213 0.43 -0.0 361,638 + B158DRAFT_2213 0.43 -0.3 361,638 + B158DRAFT_2213 0.43 -0.0 361,638 + B158DRAFT_2213 0.43 -0.2 361,638 + B158DRAFT_2213 0.43 +0.5 361,638 + B158DRAFT_2213 0.43 +0.0 361,646 - B158DRAFT_2213 0.44 +0.4 361,646 - B158DRAFT_2213 0.44 -0.2 361,646 - B158DRAFT_2213 0.44 -0.4 361,646 - B158DRAFT_2213 0.44 -0.4 361,646 - B158DRAFT_2213 0.44 +0.1 361,646 - B158DRAFT_2213 0.44 -0.2 361,646 - B158DRAFT_2213 0.44 -0.0 361,646 - B158DRAFT_2213 0.44 -0.6 361,646 - B158DRAFT_2213 0.44 -0.3 361,646 - B158DRAFT_2213 0.44 +1.3 361,646 - B158DRAFT_2213 0.44 +0.0 361,662 + B158DRAFT_2213 0.46 -0.4 361,702 + B158DRAFT_2213 0.53 -0.0 361,710 - B158DRAFT_2213 0.54 +0.1 361,710 - B158DRAFT_2213 0.54 -0.0 361,712 + B158DRAFT_2213 0.55 +0.1 361,712 + B158DRAFT_2213 0.55 -0.3 361,722 - B158DRAFT_2213 0.56 -0.4 361,774 + B158DRAFT_2213 0.65 -0.2 361,791 + B158DRAFT_2213 0.68 -0.2 361,826 - B158DRAFT_2213 0.73 -0.1 361,826 - B158DRAFT_2213 0.73 -0.2 361,871 - B158DRAFT_2213 0.81 +0.2 361,871 - B158DRAFT_2213 0.81 -0.2 362,003 + +0.0 362,003 + -0.2 362,003 + -0.1 362,011 - -0.1 362,011 - -0.3 362,011 - -0.1 362,049 + B158DRAFT_2214 0.12 -0.1 362,110 - B158DRAFT_2214 0.24 +0.0 362,222 + B158DRAFT_2214 0.44 -0.4 362,237 + B158DRAFT_2214 0.47 -0.0 362,238 - B158DRAFT_2214 0.47 +0.4 362,242 + B158DRAFT_2214 0.47 -0.1 362,317 + B158DRAFT_2214 0.61 +0.2 362,318 - B158DRAFT_2214 0.61 -0.1 362,318 - B158DRAFT_2214 0.61 +0.1 362,354 - B158DRAFT_2214 0.68 +0.3 362,452 - B158DRAFT_2214 0.86 -0.1 362,472 + B158DRAFT_2214 0.89 -0.2 362,472 + B158DRAFT_2214 0.89 -0.0 362,472 + B158DRAFT_2214 0.89 +0.3 362,473 + B158DRAFT_2214 0.89 -0.1 362,480 - +0.1 362,563 - +0.3 362,593 - -0.1 362,679 + -0.6 362,718 - +0.4 362,718 - -0.3 362,757 + -0.4 362,773 + B158DRAFT_2215 0.10 -0.5 362,819 - B158DRAFT_2215 0.14 -0.1 362,824 - B158DRAFT_2215 0.14 -0.1 362,912 - B158DRAFT_2215 0.21 -3.2 362,929 + B158DRAFT_2215 0.22 +0.0 362,929 + B158DRAFT_2215 0.22 -0.6 362,937 + B158DRAFT_2215 0.23 -0.3 362,937 + B158DRAFT_2215 0.23 -0.7 362,937 + B158DRAFT_2215 0.23 -1.0 362,937 + B158DRAFT_2215 0.23 -1.2 362,937 + B158DRAFT_2215 0.23 -1.8 362,937 + B158DRAFT_2215 0.23 -0.4 362,937 + B158DRAFT_2215 0.23 -0.3 362,937 + B158DRAFT_2215 0.23 -0.4 362,937 + B158DRAFT_2215 0.23 -0.3 362,937 + B158DRAFT_2215 0.23 -0.1 362,937 + B158DRAFT_2215 0.23 -1.4 362,937 + B158DRAFT_2215 0.23 -0.8 362,937 - B158DRAFT_2215 0.23 -0.5 362,937 - B158DRAFT_2215 0.23 +0.4 362,945 - B158DRAFT_2215 0.24 -0.2 362,945 - B158DRAFT_2215 0.24 -0.5 362,945 - B158DRAFT_2215 0.24 -2.5 362,945 - B158DRAFT_2215 0.24 -0.7 362,945 - B158DRAFT_2215 0.24 +0.1 362,945 - B158DRAFT_2215 0.24 -0.9 362,945 - B158DRAFT_2215 0.24 -0.2 362,945 - B158DRAFT_2215 0.24 -0.4 362,945 - B158DRAFT_2215 0.24 -0.6 362,950 - B158DRAFT_2215 0.24 -0.2 362,964 + B158DRAFT_2215 0.25 -0.7 362,972 - B158DRAFT_2215 0.26 -1.0 362,972 - B158DRAFT_2215 0.26 -0.0 362,985 + B158DRAFT_2215 0.27 -0.8 363,019 + B158DRAFT_2215 0.29 -0.2 363,019 + B158DRAFT_2215 0.29 +0.2 363,021 - B158DRAFT_2215 0.29 -0.3 363,033 + B158DRAFT_2215 0.30 +0.3 363,046 + B158DRAFT_2215 0.31 -0.0 363,075 + B158DRAFT_2215 0.33 -0.2 363,119 + B158DRAFT_2215 0.37 -0.6 363,127 - B158DRAFT_2215 0.37 -0.2 363,127 - B158DRAFT_2215 0.37 +0.0 363,138 + B158DRAFT_2215 0.38 -1.0 363,195 - B158DRAFT_2215 0.43 +0.6 363,355 - B158DRAFT_2215 0.55 -0.9 363,496 + B158DRAFT_2215 0.66 -2.4 363,496 + B158DRAFT_2215 0.66 -0.2
Or see this region's nucleotide sequence