Experiment: m.b. Spectinomycin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1544 and B158DRAFT_1546 are separated by 308 nucleotides B158DRAFT_1546 and B158DRAFT_1547 are separated by 301 nucleotides B158DRAFT_1547 and B158DRAFT_1548 are separated by 71 nucleotides
B158DRAFT_1544: B158DRAFT_1544 - tRNA_Arg_ACG, at 1,600,706 to 1,600,782
_1544
B158DRAFT_1546: B158DRAFT_1546 - hypothetical protein, at 1,601,091 to 1,601,315
_1546
B158DRAFT_1547: B158DRAFT_1547 - hypothetical protein, at 1,601,617 to 1,602,090
_1547
B158DRAFT_1548: B158DRAFT_1548 - Uncharacterized protein related to deoxyribodipyrimidine photolyase, at 1,602,162 to 1,603,709
_1548
Position (kb)
1601
1602
1603 Strain fitness (log2 ratio)
-1
0
1 at 1600.833 kb on + strand at 1600.840 kb on - strand at 1601.009 kb on - strand at 1601.009 kb on - strand at 1601.057 kb on - strand at 1601.067 kb on - strand at 1601.087 kb on - strand at 1601.283 kb on - strand, within B158DRAFT_1546 at 1601.338 kb on + strand at 1601.340 kb on - strand at 1601.415 kb on - strand at 1601.419 kb on + strand at 1601.419 kb on + strand at 1601.419 kb on + strand at 1601.419 kb on + strand at 1601.427 kb on - strand at 1601.454 kb on + strand at 1601.462 kb on - strand at 1601.564 kb on + strand at 1601.564 kb on + strand at 1601.564 kb on + strand at 1601.571 kb on + strand at 1601.572 kb on - strand at 1601.572 kb on - strand at 1601.589 kb on - strand at 1601.658 kb on + strand at 1601.666 kb on - strand, within B158DRAFT_1547 at 1601.677 kb on + strand, within B158DRAFT_1547 at 1601.677 kb on + strand, within B158DRAFT_1547 at 1601.677 kb on + strand, within B158DRAFT_1547 at 1601.685 kb on - strand, within B158DRAFT_1547 at 1601.685 kb on - strand, within B158DRAFT_1547 at 1601.856 kb on + strand, within B158DRAFT_1547 at 1601.906 kb on + strand, within B158DRAFT_1547 at 1601.916 kb on + strand, within B158DRAFT_1547 at 1601.924 kb on - strand, within B158DRAFT_1547 at 1601.924 kb on - strand, within B158DRAFT_1547 at 1601.924 kb on - strand, within B158DRAFT_1547 at 1601.924 kb on - strand, within B158DRAFT_1547 at 1601.924 kb on - strand, within B158DRAFT_1547 at 1601.954 kb on - strand, within B158DRAFT_1547 at 1601.973 kb on - strand, within B158DRAFT_1547 at 1601.985 kb on + strand, within B158DRAFT_1547 at 1601.993 kb on - strand, within B158DRAFT_1547 at 1602.017 kb on + strand, within B158DRAFT_1547 at 1602.017 kb on + strand, within B158DRAFT_1547 at 1602.017 kb on - strand, within B158DRAFT_1547 at 1602.035 kb on - strand, within B158DRAFT_1547 at 1602.048 kb on + strand at 1602.048 kb on + strand at 1602.048 kb on + strand at 1602.048 kb on + strand at 1602.056 kb on - strand at 1602.056 kb on - strand at 1602.095 kb on + strand at 1602.125 kb on - strand at 1602.147 kb on - strand at 1602.147 kb on - strand at 1602.154 kb on + strand at 1602.154 kb on + strand at 1602.154 kb on + strand at 1602.154 kb on + strand at 1602.162 kb on - strand at 1602.162 kb on - strand at 1602.187 kb on + strand at 1602.187 kb on + strand at 1602.187 kb on + strand at 1602.187 kb on + strand at 1602.187 kb on + strand at 1602.187 kb on + strand at 1602.187 kb on + strand at 1602.195 kb on - strand at 1602.195 kb on - strand at 1602.195 kb on - strand at 1602.205 kb on + strand at 1602.206 kb on + strand at 1602.206 kb on + strand at 1602.206 kb on + strand at 1602.206 kb on + strand at 1602.206 kb on + strand at 1602.206 kb on + strand at 1602.206 kb on + strand at 1602.214 kb on - strand at 1602.214 kb on - strand at 1602.214 kb on - strand at 1602.214 kb on - strand at 1602.214 kb on - strand at 1602.214 kb on - strand at 1602.219 kb on - strand at 1602.224 kb on - strand at 1602.224 kb on - strand at 1602.311 kb on + strand at 1602.374 kb on - strand, within B158DRAFT_1548 at 1602.376 kb on + strand, within B158DRAFT_1548 at 1602.384 kb on - strand, within B158DRAFT_1548 at 1602.384 kb on - strand, within B158DRAFT_1548 at 1602.464 kb on - strand, within B158DRAFT_1548 at 1602.523 kb on - strand, within B158DRAFT_1548 at 1602.611 kb on - strand, within B158DRAFT_1548 at 1602.649 kb on + strand, within B158DRAFT_1548 at 1602.667 kb on - strand, within B158DRAFT_1548 at 1602.674 kb on - strand, within B158DRAFT_1548 at 1602.730 kb on - strand, within B158DRAFT_1548 at 1602.812 kb on + strand, within B158DRAFT_1548 at 1602.820 kb on + strand, within B158DRAFT_1548 at 1602.933 kb on + strand, within B158DRAFT_1548 at 1602.933 kb on + strand, within B158DRAFT_1548 at 1602.933 kb on + strand, within B158DRAFT_1548 at 1602.941 kb on - strand, within B158DRAFT_1548 at 1602.941 kb on - strand, within B158DRAFT_1548 at 1602.941 kb on - strand, within B158DRAFT_1548 at 1602.941 kb on - strand, within B158DRAFT_1548 at 1602.951 kb on - strand, within B158DRAFT_1548 at 1603.004 kb on + strand, within B158DRAFT_1548 at 1603.004 kb on + strand, within B158DRAFT_1548 at 1603.038 kb on + strand, within B158DRAFT_1548 at 1603.038 kb on + strand, within B158DRAFT_1548 at 1603.038 kb on + strand, within B158DRAFT_1548 at 1603.038 kb on + strand, within B158DRAFT_1548 at 1603.044 kb on + strand, within B158DRAFT_1548 at 1603.046 kb on - strand, within B158DRAFT_1548 at 1603.046 kb on - strand, within B158DRAFT_1548
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml remove 1,600,833 + -0.6 1,600,840 - -0.2 1,601,009 - -0.2 1,601,009 - -0.0 1,601,057 - +0.2 1,601,067 - -0.1 1,601,087 - -0.5 1,601,283 - B158DRAFT_1546 0.85 +0.0 1,601,338 + -0.8 1,601,340 - -0.2 1,601,415 - -0.4 1,601,419 + +0.1 1,601,419 + -0.2 1,601,419 + -0.4 1,601,419 + -0.9 1,601,427 - -0.5 1,601,454 + -0.3 1,601,462 - -1.1 1,601,564 + -0.3 1,601,564 + +0.0 1,601,564 + -0.3 1,601,571 + -0.4 1,601,572 - -1.2 1,601,572 - -0.3 1,601,589 - -0.1 1,601,658 + -0.9 1,601,666 - B158DRAFT_1547 0.10 -0.2 1,601,677 + B158DRAFT_1547 0.13 +0.1 1,601,677 + B158DRAFT_1547 0.13 -0.4 1,601,677 + B158DRAFT_1547 0.13 -0.2 1,601,685 - B158DRAFT_1547 0.14 -0.0 1,601,685 - B158DRAFT_1547 0.14 -0.3 1,601,856 + B158DRAFT_1547 0.50 +0.3 1,601,906 + B158DRAFT_1547 0.61 +0.2 1,601,916 + B158DRAFT_1547 0.63 +0.1 1,601,924 - B158DRAFT_1547 0.65 -0.3 1,601,924 - B158DRAFT_1547 0.65 -0.6 1,601,924 - B158DRAFT_1547 0.65 -0.3 1,601,924 - B158DRAFT_1547 0.65 -0.6 1,601,924 - B158DRAFT_1547 0.65 +0.3 1,601,954 - B158DRAFT_1547 0.71 -0.2 1,601,973 - B158DRAFT_1547 0.75 +0.2 1,601,985 + B158DRAFT_1547 0.78 -0.0 1,601,993 - B158DRAFT_1547 0.79 +0.3 1,602,017 + B158DRAFT_1547 0.84 +0.9 1,602,017 + B158DRAFT_1547 0.84 +0.2 1,602,017 - B158DRAFT_1547 0.84 -0.1 1,602,035 - B158DRAFT_1547 0.88 +0.1 1,602,048 + -0.2 1,602,048 + -0.7 1,602,048 + +0.0 1,602,048 + +0.1 1,602,056 - -0.5 1,602,056 - -0.3 1,602,095 + +0.4 1,602,125 - +0.1 1,602,147 - -0.2 1,602,147 - -0.1 1,602,154 + -0.3 1,602,154 + -0.3 1,602,154 + -0.2 1,602,154 + -0.1 1,602,162 - +0.2 1,602,162 - -0.3 1,602,187 + -0.1 1,602,187 + -0.2 1,602,187 + -0.5 1,602,187 + +0.0 1,602,187 + -1.1 1,602,187 + -0.2 1,602,187 + -0.6 1,602,195 - -0.1 1,602,195 - -0.3 1,602,195 - -0.1 1,602,205 + +0.4 1,602,206 + -0.1 1,602,206 + -0.1 1,602,206 + -0.3 1,602,206 + +0.5 1,602,206 + -0.3 1,602,206 + -0.0 1,602,206 + +0.3 1,602,214 - +0.3 1,602,214 - -0.8 1,602,214 - -0.3 1,602,214 - +0.2 1,602,214 - -0.2 1,602,214 - -0.4 1,602,219 - -0.2 1,602,224 - -0.2 1,602,224 - -0.2 1,602,311 + -0.3 1,602,374 - B158DRAFT_1548 0.14 -0.6 1,602,376 + B158DRAFT_1548 0.14 -0.1 1,602,384 - B158DRAFT_1548 0.14 -0.4 1,602,384 - B158DRAFT_1548 0.14 -0.2 1,602,464 - B158DRAFT_1548 0.20 -0.1 1,602,523 - B158DRAFT_1548 0.23 -0.5 1,602,611 - B158DRAFT_1548 0.29 -0.5 1,602,649 + B158DRAFT_1548 0.31 +0.1 1,602,667 - B158DRAFT_1548 0.33 -0.2 1,602,674 - B158DRAFT_1548 0.33 -0.2 1,602,730 - B158DRAFT_1548 0.37 -0.7 1,602,812 + B158DRAFT_1548 0.42 -0.2 1,602,820 + B158DRAFT_1548 0.43 -0.0 1,602,933 + B158DRAFT_1548 0.50 -0.0 1,602,933 + B158DRAFT_1548 0.50 -0.4 1,602,933 + B158DRAFT_1548 0.50 +0.2 1,602,941 - B158DRAFT_1548 0.50 -0.3 1,602,941 - B158DRAFT_1548 0.50 -0.4 1,602,941 - B158DRAFT_1548 0.50 -0.4 1,602,941 - B158DRAFT_1548 0.50 -0.0 1,602,951 - B158DRAFT_1548 0.51 +0.3 1,603,004 + B158DRAFT_1548 0.54 +0.3 1,603,004 + B158DRAFT_1548 0.54 -0.1 1,603,038 + B158DRAFT_1548 0.57 -0.3 1,603,038 + B158DRAFT_1548 0.57 -0.1 1,603,038 + B158DRAFT_1548 0.57 +0.1 1,603,038 + B158DRAFT_1548 0.57 -0.1 1,603,044 + B158DRAFT_1548 0.57 -0.1 1,603,046 - B158DRAFT_1548 0.57 +0.0 1,603,046 - B158DRAFT_1548 0.57 +0.2
Or see this region's nucleotide sequence