Experiment: m.b. Spectinomycin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1290 and B158DRAFT_1291 are separated by 64 nucleotides B158DRAFT_1291 and B158DRAFT_1292 are separated by 47 nucleotides
B158DRAFT_1290: B158DRAFT_1290 - Predicted protease with the C-terminal PDZ domain, at 1,334,095 to 1,335,924
_1290
B158DRAFT_1291: B158DRAFT_1291 - exodeoxyribonuclease III, at 1,335,989 to 1,336,804
_1291
B158DRAFT_1292: B158DRAFT_1292 - hypothetical protein, at 1,336,852 to 1,340,016
_1292
Position (kb)
1335
1336
1337 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1335.009 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.020 kb on + strand, within B158DRAFT_1290 at 1335.023 kb on - strand, within B158DRAFT_1290 at 1335.025 kb on + strand, within B158DRAFT_1290 at 1335.030 kb on + strand, within B158DRAFT_1290 at 1335.030 kb on + strand, within B158DRAFT_1290 at 1335.030 kb on + strand, within B158DRAFT_1290 at 1335.033 kb on - strand, within B158DRAFT_1290 at 1335.038 kb on - strand, within B158DRAFT_1290 at 1335.046 kb on + strand, within B158DRAFT_1290 at 1335.078 kb on + strand, within B158DRAFT_1290 at 1335.137 kb on + strand, within B158DRAFT_1290 at 1335.140 kb on + strand, within B158DRAFT_1290 at 1335.142 kb on + strand, within B158DRAFT_1290 at 1335.219 kb on + strand, within B158DRAFT_1290 at 1335.255 kb on + strand, within B158DRAFT_1290 at 1335.255 kb on + strand, within B158DRAFT_1290 at 1335.263 kb on - strand, within B158DRAFT_1290 at 1335.286 kb on + strand, within B158DRAFT_1290 at 1335.356 kb on + strand, within B158DRAFT_1290 at 1335.365 kb on + strand, within B158DRAFT_1290 at 1335.366 kb on + strand, within B158DRAFT_1290 at 1335.374 kb on - strand, within B158DRAFT_1290 at 1335.374 kb on - strand, within B158DRAFT_1290 at 1335.468 kb on + strand, within B158DRAFT_1290 at 1335.494 kb on - strand, within B158DRAFT_1290 at 1335.494 kb on - strand, within B158DRAFT_1290 at 1335.564 kb on + strand, within B158DRAFT_1290 at 1335.567 kb on - strand, within B158DRAFT_1290 at 1335.631 kb on - strand, within B158DRAFT_1290 at 1335.837 kb on + strand at 1336.034 kb on + strand at 1336.042 kb on - strand at 1336.116 kb on + strand, within B158DRAFT_1291 at 1336.116 kb on + strand, within B158DRAFT_1291 at 1336.198 kb on + strand, within B158DRAFT_1291 at 1336.449 kb on + strand, within B158DRAFT_1291 at 1336.449 kb on + strand, within B158DRAFT_1291 at 1336.596 kb on - strand, within B158DRAFT_1291 at 1336.620 kb on + strand, within B158DRAFT_1291 at 1336.696 kb on - strand, within B158DRAFT_1291 at 1336.705 kb on + strand, within B158DRAFT_1291 at 1336.706 kb on - strand, within B158DRAFT_1291 at 1336.713 kb on - strand, within B158DRAFT_1291 at 1336.810 kb on + strand at 1336.880 kb on - strand at 1336.892 kb on - strand at 1337.000 kb on + strand at 1337.008 kb on - strand at 1337.093 kb on + strand at 1337.101 kb on - strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.141 kb on - strand at 1337.141 kb on - strand at 1337.228 kb on + strand, within B158DRAFT_1292 at 1337.231 kb on - strand, within B158DRAFT_1292 at 1337.231 kb on - strand, within B158DRAFT_1292 at 1337.510 kb on + strand, within B158DRAFT_1292 at 1337.518 kb on - strand, within B158DRAFT_1292 at 1337.544 kb on + strand, within B158DRAFT_1292 at 1337.601 kb on - strand, within B158DRAFT_1292 at 1337.603 kb on + strand, within B158DRAFT_1292 at 1337.685 kb on + strand, within B158DRAFT_1292 at 1337.716 kb on + strand, within B158DRAFT_1292
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml remove 1,335,009 + B158DRAFT_1290 0.50 -0.0 1,335,015 + B158DRAFT_1290 0.50 +0.3 1,335,015 + B158DRAFT_1290 0.50 +0.1 1,335,015 + B158DRAFT_1290 0.50 -0.5 1,335,015 + B158DRAFT_1290 0.50 -0.4 1,335,020 + B158DRAFT_1290 0.51 +0.1 1,335,023 - B158DRAFT_1290 0.51 -0.4 1,335,025 + B158DRAFT_1290 0.51 -0.1 1,335,030 + B158DRAFT_1290 0.51 -0.4 1,335,030 + B158DRAFT_1290 0.51 -0.6 1,335,030 + B158DRAFT_1290 0.51 -0.3 1,335,033 - B158DRAFT_1290 0.51 -0.7 1,335,038 - B158DRAFT_1290 0.52 -0.2 1,335,046 + B158DRAFT_1290 0.52 -0.8 1,335,078 + B158DRAFT_1290 0.54 -0.4 1,335,137 + B158DRAFT_1290 0.57 -0.4 1,335,140 + B158DRAFT_1290 0.57 -0.1 1,335,142 + B158DRAFT_1290 0.57 -0.2 1,335,219 + B158DRAFT_1290 0.61 -0.0 1,335,255 + B158DRAFT_1290 0.63 -0.1 1,335,255 + B158DRAFT_1290 0.63 -0.1 1,335,263 - B158DRAFT_1290 0.64 +0.5 1,335,286 + B158DRAFT_1290 0.65 -0.1 1,335,356 + B158DRAFT_1290 0.69 -0.2 1,335,365 + B158DRAFT_1290 0.69 -0.3 1,335,366 + B158DRAFT_1290 0.69 -0.1 1,335,374 - B158DRAFT_1290 0.70 -1.3 1,335,374 - B158DRAFT_1290 0.70 -0.3 1,335,468 + B158DRAFT_1290 0.75 +0.1 1,335,494 - B158DRAFT_1290 0.76 -0.3 1,335,494 - B158DRAFT_1290 0.76 +0.1 1,335,564 + B158DRAFT_1290 0.80 -0.4 1,335,567 - B158DRAFT_1290 0.80 -0.2 1,335,631 - B158DRAFT_1290 0.84 -0.6 1,335,837 + -0.5 1,336,034 + +0.4 1,336,042 - +1.1 1,336,116 + B158DRAFT_1291 0.16 +0.4 1,336,116 + B158DRAFT_1291 0.16 -0.6 1,336,198 + B158DRAFT_1291 0.26 -2.1 1,336,449 + B158DRAFT_1291 0.56 -0.8 1,336,449 + B158DRAFT_1291 0.56 +0.4 1,336,596 - B158DRAFT_1291 0.74 -1.6 1,336,620 + B158DRAFT_1291 0.77 -0.6 1,336,696 - B158DRAFT_1291 0.87 -0.6 1,336,705 + B158DRAFT_1291 0.88 -1.1 1,336,706 - B158DRAFT_1291 0.88 +0.6 1,336,713 - B158DRAFT_1291 0.89 +2.4 1,336,810 + -0.1 1,336,880 - -0.2 1,336,892 - +0.3 1,337,000 + -0.5 1,337,008 - -0.0 1,337,093 + -0.2 1,337,101 - -0.3 1,337,133 + -0.4 1,337,133 + -0.0 1,337,133 + +0.1 1,337,133 + -0.1 1,337,133 + -0.6 1,337,141 - -0.8 1,337,141 - -0.2 1,337,228 + B158DRAFT_1292 0.12 +0.0 1,337,231 - B158DRAFT_1292 0.12 -0.3 1,337,231 - B158DRAFT_1292 0.12 -0.4 1,337,510 + B158DRAFT_1292 0.21 -0.1 1,337,518 - B158DRAFT_1292 0.21 +0.1 1,337,544 + B158DRAFT_1292 0.22 -0.8 1,337,601 - B158DRAFT_1292 0.24 +0.1 1,337,603 + B158DRAFT_1292 0.24 +0.1 1,337,685 + B158DRAFT_1292 0.26 +0.2 1,337,716 + B158DRAFT_1292 0.27 -0.3
Or see this region's nucleotide sequence