Experiment: m.b. Spectinomycin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0667 and B158DRAFT_0668 are separated by 131 nucleotides B158DRAFT_0668 and B158DRAFT_0669 overlap by 20 nucleotides B158DRAFT_0669 and B158DRAFT_0670 are separated by 13 nucleotides
B158DRAFT_0667: B158DRAFT_0667 - Protein of unknown function (DUF2909)., at 671,059 to 671,343
_0667
B158DRAFT_0668: B158DRAFT_0668 - Uncharacterized conserved protein, at 671,475 to 672,260
_0668
B158DRAFT_0669: B158DRAFT_0669 - hypothetical protein, at 672,241 to 672,852
_0669
B158DRAFT_0670: B158DRAFT_0670 - Uncharacterized protein required for cytochrome oxidase assembly, at 672,866 to 673,975
_0670
Position (kb) 672
673 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 671.261 kb on + strand, within B158DRAFT_0667 at 671.485 kb on - strand at 671.510 kb on + strand at 671.515 kb on + strand at 671.523 kb on - strand at 671.526 kb on + strand at 671.602 kb on - strand, within B158DRAFT_0668 at 671.651 kb on + strand, within B158DRAFT_0668 at 671.656 kb on + strand, within B158DRAFT_0668 at 671.688 kb on - strand, within B158DRAFT_0668 at 671.694 kb on + strand, within B158DRAFT_0668 at 671.704 kb on + strand, within B158DRAFT_0668 at 671.704 kb on + strand, within B158DRAFT_0668 at 671.712 kb on - strand, within B158DRAFT_0668 at 671.712 kb on - strand, within B158DRAFT_0668 at 671.712 kb on - strand, within B158DRAFT_0668 at 671.712 kb on - strand, within B158DRAFT_0668 at 671.713 kb on - strand, within B158DRAFT_0668 at 671.727 kb on + strand, within B158DRAFT_0668 at 671.764 kb on + strand, within B158DRAFT_0668 at 671.771 kb on - strand, within B158DRAFT_0668 at 671.772 kb on + strand, within B158DRAFT_0668 at 671.777 kb on + strand, within B158DRAFT_0668 at 671.802 kb on - strand, within B158DRAFT_0668 at 671.846 kb on + strand, within B158DRAFT_0668 at 671.913 kb on + strand, within B158DRAFT_0668 at 671.921 kb on - strand, within B158DRAFT_0668 at 671.921 kb on - strand, within B158DRAFT_0668 at 671.928 kb on + strand, within B158DRAFT_0668 at 671.928 kb on - strand, within B158DRAFT_0668 at 671.950 kb on + strand, within B158DRAFT_0668 at 672.057 kb on - strand, within B158DRAFT_0668 at 672.098 kb on + strand, within B158DRAFT_0668 at 672.100 kb on - strand, within B158DRAFT_0668 at 672.104 kb on - strand, within B158DRAFT_0668 at 672.141 kb on + strand, within B158DRAFT_0668 at 672.168 kb on + strand, within B158DRAFT_0668 at 672.235 kb on + strand at 672.312 kb on - strand, within B158DRAFT_0669 at 672.348 kb on + strand, within B158DRAFT_0669 at 672.368 kb on - strand, within B158DRAFT_0669 at 672.386 kb on + strand, within B158DRAFT_0669 at 672.409 kb on - strand, within B158DRAFT_0669 at 672.466 kb on - strand, within B158DRAFT_0669 at 672.478 kb on + strand, within B158DRAFT_0669 at 672.545 kb on + strand, within B158DRAFT_0669 at 672.545 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.551 kb on + strand, within B158DRAFT_0669 at 672.553 kb on - strand, within B158DRAFT_0669 at 672.553 kb on - strand, within B158DRAFT_0669 at 672.553 kb on - strand, within B158DRAFT_0669 at 672.558 kb on - strand, within B158DRAFT_0669 at 672.558 kb on - strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.685 kb on + strand, within B158DRAFT_0669 at 672.688 kb on - strand, within B158DRAFT_0669 at 672.690 kb on + strand, within B158DRAFT_0669 at 672.705 kb on + strand, within B158DRAFT_0669 at 672.798 kb on + strand at 672.806 kb on - strand at 672.808 kb on - strand at 672.813 kb on - strand at 672.832 kb on + strand at 672.837 kb on + strand at 672.837 kb on + strand at 672.837 kb on + strand at 672.837 kb on + strand at 672.947 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.998 kb on - strand, within B158DRAFT_0670 at 673.017 kb on + strand, within B158DRAFT_0670 at 673.070 kb on + strand, within B158DRAFT_0670 at 673.104 kb on + strand, within B158DRAFT_0670 at 673.118 kb on + strand, within B158DRAFT_0670 at 673.128 kb on + strand, within B158DRAFT_0670 at 673.169 kb on + strand, within B158DRAFT_0670 at 673.202 kb on - strand, within B158DRAFT_0670 at 673.270 kb on - strand, within B158DRAFT_0670 at 673.299 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.550 kb on + strand, within B158DRAFT_0670 at 673.558 kb on - strand, within B158DRAFT_0670 at 673.567 kb on + strand, within B158DRAFT_0670 at 673.575 kb on - strand, within B158DRAFT_0670 at 673.606 kb on + strand, within B158DRAFT_0670 at 673.606 kb on + strand, within B158DRAFT_0670 at 673.618 kb on + strand, within B158DRAFT_0670 at 673.621 kb on - strand, within B158DRAFT_0670 at 673.725 kb on + strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.789 kb on - strand, within B158DRAFT_0670 at 673.798 kb on + strand, within B158DRAFT_0670 at 673.798 kb on + strand, within B158DRAFT_0670 at 673.798 kb on + strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.1 mg/ml remove 671,261 + B158DRAFT_0667 0.71 +0.2 671,485 - +0.1 671,510 + -0.3 671,515 + -1.0 671,523 - -2.2 671,526 + -0.7 671,602 - B158DRAFT_0668 0.16 -1.2 671,651 + B158DRAFT_0668 0.22 -1.6 671,656 + B158DRAFT_0668 0.23 -1.3 671,688 - B158DRAFT_0668 0.27 -0.1 671,694 + B158DRAFT_0668 0.28 +1.0 671,704 + B158DRAFT_0668 0.29 -1.7 671,704 + B158DRAFT_0668 0.29 -3.9 671,712 - B158DRAFT_0668 0.30 -1.8 671,712 - B158DRAFT_0668 0.30 +0.1 671,712 - B158DRAFT_0668 0.30 -0.8 671,712 - B158DRAFT_0668 0.30 -0.6 671,713 - B158DRAFT_0668 0.30 +0.1 671,727 + B158DRAFT_0668 0.32 -1.2 671,764 + B158DRAFT_0668 0.37 -1.3 671,771 - B158DRAFT_0668 0.38 +0.4 671,772 + B158DRAFT_0668 0.38 -1.1 671,777 + B158DRAFT_0668 0.38 -2.1 671,802 - B158DRAFT_0668 0.42 -0.9 671,846 + B158DRAFT_0668 0.47 -0.2 671,913 + B158DRAFT_0668 0.56 +0.4 671,921 - B158DRAFT_0668 0.57 -1.1 671,921 - B158DRAFT_0668 0.57 -1.0 671,928 + B158DRAFT_0668 0.58 -0.2 671,928 - B158DRAFT_0668 0.58 -0.8 671,950 + B158DRAFT_0668 0.60 -0.9 672,057 - B158DRAFT_0668 0.74 -2.3 672,098 + B158DRAFT_0668 0.79 -2.3 672,100 - B158DRAFT_0668 0.80 -2.1 672,104 - B158DRAFT_0668 0.80 -1.7 672,141 + B158DRAFT_0668 0.85 -1.6 672,168 + B158DRAFT_0668 0.88 +0.2 672,235 + -1.1 672,312 - B158DRAFT_0669 0.12 -1.4 672,348 + B158DRAFT_0669 0.17 -1.3 672,368 - B158DRAFT_0669 0.21 -2.3 672,386 + B158DRAFT_0669 0.24 -0.5 672,409 - B158DRAFT_0669 0.27 +0.1 672,466 - B158DRAFT_0669 0.37 -0.1 672,478 + B158DRAFT_0669 0.39 -1.6 672,545 + B158DRAFT_0669 0.50 -0.9 672,545 + B158DRAFT_0669 0.50 -1.6 672,550 + B158DRAFT_0669 0.50 -0.3 672,550 + B158DRAFT_0669 0.50 -1.0 672,550 + B158DRAFT_0669 0.50 -0.7 672,550 + B158DRAFT_0669 0.50 -3.5 672,551 + B158DRAFT_0669 0.51 -1.9 672,553 - B158DRAFT_0669 0.51 -0.4 672,553 - B158DRAFT_0669 0.51 +0.1 672,553 - B158DRAFT_0669 0.51 -0.6 672,558 - B158DRAFT_0669 0.52 -0.5 672,558 - B158DRAFT_0669 0.52 -1.1 672,637 + B158DRAFT_0669 0.65 -0.7 672,637 + B158DRAFT_0669 0.65 -1.1 672,637 + B158DRAFT_0669 0.65 -0.9 672,637 + B158DRAFT_0669 0.65 -2.0 672,637 + B158DRAFT_0669 0.65 -1.0 672,637 + B158DRAFT_0669 0.65 -0.0 672,645 - B158DRAFT_0669 0.66 -0.6 672,645 - B158DRAFT_0669 0.66 -1.0 672,645 - B158DRAFT_0669 0.66 -1.6 672,645 - B158DRAFT_0669 0.66 -0.5 672,645 - B158DRAFT_0669 0.66 -1.7 672,645 - B158DRAFT_0669 0.66 -0.8 672,685 + B158DRAFT_0669 0.73 -3.4 672,688 - B158DRAFT_0669 0.73 -0.7 672,690 + B158DRAFT_0669 0.73 -1.0 672,705 + B158DRAFT_0669 0.76 -1.4 672,798 + -0.4 672,806 - -1.7 672,808 - -1.3 672,813 - +0.2 672,832 + -0.6 672,837 + -0.8 672,837 + -1.1 672,837 + -0.6 672,837 + -0.3 672,947 + -0.7 672,962 + +0.1 672,962 + -1.2 672,962 + -1.5 672,962 + -0.7 672,962 + -0.9 672,962 + -0.5 672,970 - -0.5 672,970 - -1.5 672,970 - -0.8 672,970 - -2.5 672,970 - -1.4 672,970 - -1.5 672,970 - -1.7 672,998 - B158DRAFT_0670 0.12 -1.4 673,017 + B158DRAFT_0670 0.14 -1.5 673,070 + B158DRAFT_0670 0.18 -1.4 673,104 + B158DRAFT_0670 0.21 +0.4 673,118 + B158DRAFT_0670 0.23 -0.8 673,128 + B158DRAFT_0670 0.24 -1.5 673,169 + B158DRAFT_0670 0.27 +1.3 673,202 - B158DRAFT_0670 0.30 -1.4 673,270 - B158DRAFT_0670 0.36 -1.5 673,299 - B158DRAFT_0670 0.39 -1.0 673,412 - B158DRAFT_0670 0.49 -0.0 673,412 - B158DRAFT_0670 0.49 -1.7 673,412 - B158DRAFT_0670 0.49 -1.2 673,412 - B158DRAFT_0670 0.49 -1.8 673,412 - B158DRAFT_0670 0.49 +0.2 673,550 + B158DRAFT_0670 0.62 -1.0 673,558 - B158DRAFT_0670 0.62 -1.3 673,567 + B158DRAFT_0670 0.63 -0.0 673,575 - B158DRAFT_0670 0.64 -1.3 673,606 + B158DRAFT_0670 0.67 -1.5 673,606 + B158DRAFT_0670 0.67 -1.0 673,618 + B158DRAFT_0670 0.68 +0.1 673,621 - B158DRAFT_0670 0.68 -2.3 673,725 + B158DRAFT_0670 0.77 -0.6 673,771 - B158DRAFT_0670 0.82 -1.7 673,771 - B158DRAFT_0670 0.82 -1.5 673,771 - B158DRAFT_0670 0.82 -2.1 673,771 - B158DRAFT_0670 0.82 -1.9 673,771 - B158DRAFT_0670 0.82 -1.3 673,771 - B158DRAFT_0670 0.82 -1.1 673,789 - B158DRAFT_0670 0.83 -1.2 673,798 + B158DRAFT_0670 0.84 -1.2 673,798 + B158DRAFT_0670 0.84 -1.0 673,798 + B158DRAFT_0670 0.84 -1.5 673,806 - B158DRAFT_0670 0.85 -1.1 673,806 - B158DRAFT_0670 0.85 -1.1 673,806 - B158DRAFT_0670 0.85 -1.7 673,806 - B158DRAFT_0670 0.85 -1.6
Or see this region's nucleotide sequence