Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2605 and PfGW456L13_2606 are separated by 202 nucleotides PfGW456L13_2606 and PfGW456L13_2607 are separated by 125 nucleotides PfGW456L13_2607 and PfGW456L13_2608 are separated by 2 nucleotides
PfGW456L13_2605 - Membrane fusion component of tripartite multidrug resistance system, at 2,897,469 to 2,898,671
_2605
PfGW456L13_2606 - Inner membrane component of tripartite multidrug resistance system, at 2,898,874 to 2,900,406
_2606
PfGW456L13_2607 - UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54), at 2,900,532 to 2,901,278
_2607
PfGW456L13_2608 - Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8), at 2,901,281 to 2,901,784
_2608
Position (kb)
2898
2899
2900
2901 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2898.166 kb on + strand, within PfGW456L13_2605 at 2898.166 kb on + strand, within PfGW456L13_2605 at 2898.167 kb on - strand, within PfGW456L13_2605 at 2898.167 kb on - strand, within PfGW456L13_2605 at 2898.309 kb on + strand, within PfGW456L13_2605 at 2898.310 kb on - strand, within PfGW456L13_2605 at 2898.310 kb on - strand, within PfGW456L13_2605 at 2898.324 kb on - strand, within PfGW456L13_2605 at 2898.324 kb on - strand, within PfGW456L13_2605 at 2898.324 kb on - strand, within PfGW456L13_2605 at 2898.327 kb on + strand, within PfGW456L13_2605 at 2898.327 kb on + strand, within PfGW456L13_2605 at 2898.328 kb on - strand, within PfGW456L13_2605 at 2898.582 kb on + strand at 2898.582 kb on + strand at 2898.583 kb on - strand at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.366 kb on + strand, within PfGW456L13_2606 at 2899.367 kb on - strand, within PfGW456L13_2606 at 2899.367 kb on - strand, within PfGW456L13_2606 at 2899.480 kb on + strand, within PfGW456L13_2606 at 2899.480 kb on + strand, within PfGW456L13_2606 at 2899.480 kb on + strand, within PfGW456L13_2606 at 2899.481 kb on - strand, within PfGW456L13_2606 at 2899.481 kb on - strand, within PfGW456L13_2606 at 2899.481 kb on - strand, within PfGW456L13_2606 at 2899.677 kb on + strand, within PfGW456L13_2606 at 2899.678 kb on - strand, within PfGW456L13_2606 at 2899.678 kb on - strand, within PfGW456L13_2606 at 2899.678 kb on - strand, within PfGW456L13_2606 at 2899.774 kb on + strand, within PfGW456L13_2606 at 2899.774 kb on + strand, within PfGW456L13_2606 at 2899.775 kb on - strand, within PfGW456L13_2606 at 2899.849 kb on - strand, within PfGW456L13_2606 at 2899.849 kb on - strand, within PfGW456L13_2606 at 2899.852 kb on + strand, within PfGW456L13_2606 at 2899.852 kb on + strand, within PfGW456L13_2606 at 2899.852 kb on + strand, within PfGW456L13_2606 at 2899.853 kb on - strand, within PfGW456L13_2606 at 2899.853 kb on - strand at 2899.853 kb on - strand, within PfGW456L13_2606 at 2899.853 kb on - strand, within PfGW456L13_2606 at 2899.853 kb on - strand, within PfGW456L13_2606 at 2899.853 kb on - strand, within PfGW456L13_2606 at 2899.853 kb on - strand, within PfGW456L13_2606 at 2899.853 kb on - strand, within PfGW456L13_2606 at 2900.161 kb on + strand, within PfGW456L13_2606 at 2900.162 kb on - strand, within PfGW456L13_2606 at 2900.242 kb on + strand, within PfGW456L13_2606 at 2900.242 kb on + strand, within PfGW456L13_2606 at 2900.242 kb on + strand, within PfGW456L13_2606 at 2900.242 kb on + strand, within PfGW456L13_2606 at 2900.243 kb on - strand, within PfGW456L13_2606 at 2900.243 kb on - strand, within PfGW456L13_2606 at 2900.244 kb on + strand at 2900.245 kb on - strand, within PfGW456L13_2606 at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.278 kb on + strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.279 kb on - strand at 2900.299 kb on + strand at 2900.299 kb on + strand at 2900.300 kb on - strand at 2900.300 kb on - strand at 2900.300 kb on - strand at 2900.300 kb on - strand at 2900.300 kb on - strand at 2900.300 kb on - strand at 2900.300 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 2,898,166 + PfGW456L13_2605 0.58 +0.3 2,898,166 + PfGW456L13_2605 0.58 -0.5 2,898,167 - PfGW456L13_2605 0.58 +2.0 2,898,167 - PfGW456L13_2605 0.58 -0.7 2,898,309 + PfGW456L13_2605 0.70 -1.3 2,898,310 - PfGW456L13_2605 0.70 -0.8 2,898,310 - PfGW456L13_2605 0.70 +0.2 2,898,324 - PfGW456L13_2605 0.71 +0.5 2,898,324 - PfGW456L13_2605 0.71 +1.1 2,898,324 - PfGW456L13_2605 0.71 -0.4 2,898,327 + PfGW456L13_2605 0.71 +0.0 2,898,327 + PfGW456L13_2605 0.71 -0.5 2,898,328 - PfGW456L13_2605 0.71 +0.6 2,898,582 + -0.4 2,898,582 + +0.5 2,898,583 - +0.4 2,899,366 + PfGW456L13_2606 0.32 -0.0 2,899,366 + PfGW456L13_2606 0.32 -0.2 2,899,366 + PfGW456L13_2606 0.32 +1.2 2,899,366 + PfGW456L13_2606 0.32 +2.0 2,899,366 + PfGW456L13_2606 0.32 +0.3 2,899,366 + PfGW456L13_2606 0.32 +0.2 2,899,366 + PfGW456L13_2606 0.32 -1.6 2,899,367 - PfGW456L13_2606 0.32 -0.6 2,899,367 - PfGW456L13_2606 0.32 +0.6 2,899,480 + PfGW456L13_2606 0.40 -0.8 2,899,480 + PfGW456L13_2606 0.40 -0.1 2,899,480 + PfGW456L13_2606 0.40 +0.2 2,899,481 - PfGW456L13_2606 0.40 +0.7 2,899,481 - PfGW456L13_2606 0.40 -0.4 2,899,481 - PfGW456L13_2606 0.40 -2.0 2,899,677 + PfGW456L13_2606 0.52 +0.9 2,899,678 - PfGW456L13_2606 0.52 -1.0 2,899,678 - PfGW456L13_2606 0.52 +0.8 2,899,678 - PfGW456L13_2606 0.52 +0.7 2,899,774 + PfGW456L13_2606 0.59 -0.1 2,899,774 + PfGW456L13_2606 0.59 -0.3 2,899,775 - PfGW456L13_2606 0.59 -0.2 2,899,849 - PfGW456L13_2606 0.64 -0.6 2,899,849 - PfGW456L13_2606 0.64 +0.8 2,899,852 + PfGW456L13_2606 0.64 +0.2 2,899,852 + PfGW456L13_2606 0.64 -0.0 2,899,852 + PfGW456L13_2606 0.64 +0.3 2,899,853 - PfGW456L13_2606 0.64 +0.3 2,899,853 - -0.6 2,899,853 - PfGW456L13_2606 0.64 +1.8 2,899,853 - PfGW456L13_2606 0.64 +1.2 2,899,853 - PfGW456L13_2606 0.64 -0.4 2,899,853 - PfGW456L13_2606 0.64 -0.2 2,899,853 - PfGW456L13_2606 0.64 -0.5 2,899,853 - PfGW456L13_2606 0.64 -0.4 2,900,161 + PfGW456L13_2606 0.84 +0.0 2,900,162 - PfGW456L13_2606 0.84 -0.6 2,900,242 + PfGW456L13_2606 0.89 +0.2 2,900,242 + PfGW456L13_2606 0.89 +0.5 2,900,242 + PfGW456L13_2606 0.89 -0.5 2,900,242 + PfGW456L13_2606 0.89 -1.0 2,900,243 - PfGW456L13_2606 0.89 -0.3 2,900,243 - PfGW456L13_2606 0.89 -0.1 2,900,244 + +0.4 2,900,245 - PfGW456L13_2606 0.89 +0.6 2,900,278 + +0.8 2,900,278 + +0.1 2,900,278 + +0.3 2,900,278 + +0.6 2,900,278 + -1.6 2,900,278 + -0.9 2,900,278 + +0.1 2,900,278 + -1.9 2,900,278 + +0.6 2,900,278 + +0.5 2,900,278 + -0.6 2,900,279 - -1.1 2,900,279 - -1.3 2,900,279 - -0.2 2,900,279 - +0.4 2,900,279 - +0.8 2,900,279 - -1.0 2,900,279 - -0.4 2,900,279 - +0.4 2,900,279 - -0.4 2,900,279 - +0.4 2,900,279 - -0.9 2,900,299 + +0.1 2,900,299 + +0.5 2,900,300 - +0.7 2,900,300 - +0.1 2,900,300 - -0.1 2,900,300 - -1.9 2,900,300 - -1.4 2,900,300 - +0.4 2,900,300 - +0.3
Or see this region's nucleotide sequence