Experiment: LB_plus_SM_buffer with 8C2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF756 and GFF757 are separated by 96 nucleotides GFF757 and GFF758 are separated by 345 nucleotides
GFF756 - Ribosomal protein S6 glutaminyl transferase, at 113,625 to 114,527
GFF756
GFF757 - putative sensory transduction regulator, at 114,624 to 115,100
GFF757
GFF758 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 115,446 to 116,561
GFF758
Position (kb)
114
115
116 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 113.717 kb on - strand, within GFF756 at 113.717 kb on - strand, within GFF756 at 113.737 kb on - strand, within GFF756 at 113.739 kb on - strand, within GFF756 at 113.748 kb on - strand, within GFF756 at 113.772 kb on + strand, within GFF756 at 113.832 kb on - strand, within GFF756 at 113.839 kb on - strand, within GFF756 at 113.839 kb on - strand, within GFF756 at 113.907 kb on - strand, within GFF756 at 114.015 kb on - strand, within GFF756 at 114.159 kb on + strand, within GFF756 at 114.159 kb on + strand, within GFF756 at 114.160 kb on - strand, within GFF756 at 114.173 kb on + strand, within GFF756 at 114.613 kb on - strand at 114.623 kb on + strand at 114.653 kb on + strand at 114.654 kb on - strand at 114.753 kb on + strand, within GFF757 at 114.937 kb on + strand, within GFF757 at 115.098 kb on + strand at 115.296 kb on + strand at 115.375 kb on - strand at 115.551 kb on + strand at 115.551 kb on + strand at 115.566 kb on + strand, within GFF758 at 115.567 kb on - strand, within GFF758 at 115.614 kb on - strand, within GFF758 at 115.623 kb on + strand, within GFF758 at 115.624 kb on - strand, within GFF758 at 115.624 kb on - strand, within GFF758 at 115.664 kb on - strand, within GFF758 at 115.833 kb on + strand, within GFF758 at 115.833 kb on + strand, within GFF758 at 115.833 kb on + strand, within GFF758 at 115.846 kb on - strand, within GFF758 at 115.847 kb on + strand, within GFF758 at 115.848 kb on - strand, within GFF758 at 115.874 kb on + strand, within GFF758 at 115.875 kb on - strand, within GFF758 at 116.099 kb on - strand, within GFF758
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 8C2_phage 15 MOI remove 113,717 - GFF756 0.10 -0.8 113,717 - GFF756 0.10 -1.0 113,737 - GFF756 0.12 -0.9 113,739 - GFF756 0.13 +0.3 113,748 - GFF756 0.14 -1.5 113,772 + GFF756 0.16 +0.7 113,832 - GFF756 0.23 -0.6 113,839 - GFF756 0.24 -0.2 113,839 - GFF756 0.24 -1.2 113,907 - GFF756 0.31 -0.3 114,015 - GFF756 0.43 -1.3 114,159 + GFF756 0.59 +0.3 114,159 + GFF756 0.59 +1.7 114,160 - GFF756 0.59 +1.9 114,173 + GFF756 0.61 +1.1 114,613 - +0.2 114,623 + -0.2 114,653 + -0.6 114,654 - -0.0 114,753 + GFF757 0.27 +1.4 114,937 + GFF757 0.66 -1.6 115,098 + +0.2 115,296 + -0.8 115,375 - +0.7 115,551 + -0.4 115,551 + -0.7 115,566 + GFF758 0.11 +0.1 115,567 - GFF758 0.11 +0.3 115,614 - GFF758 0.15 +1.0 115,623 + GFF758 0.16 +0.2 115,624 - GFF758 0.16 -1.1 115,624 - GFF758 0.16 -0.1 115,664 - GFF758 0.20 +0.3 115,833 + GFF758 0.35 -0.2 115,833 + GFF758 0.35 -1.5 115,833 + GFF758 0.35 +1.4 115,846 - GFF758 0.36 -1.0 115,847 + GFF758 0.36 -0.0 115,848 - GFF758 0.36 +4.4 115,874 + GFF758 0.38 -0.9 115,875 - GFF758 0.38 +0.2 116,099 - GFF758 0.59 -1.4
Or see this region's nucleotide sequence