Experiment: LB_plus_SM_buffer with 8C2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2572 and GFF2573 are separated by 35 nucleotides GFF2573 and GFF2574 are separated by 283 nucleotides
GFF2572 - Phenazine biosynthesis protein PhzF, at 93,064 to 93,957
GFF2572
GFF2573 - N-hydroxyarylamine O-acetyltransferase (EC 2.3.1.118), at 93,993 to 94,838
GFF2573
GFF2574 - FIG074102: hypothetical protein, at 95,122 to 95,754
GFF2574
Position (kb)
93
94
95 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 93.032 kb on + strand at 93.153 kb on - strand at 93.242 kb on + strand, within GFF2572 at 93.242 kb on + strand, within GFF2572 at 93.248 kb on - strand, within GFF2572 at 93.263 kb on + strand, within GFF2572 at 93.305 kb on - strand, within GFF2572 at 93.320 kb on + strand, within GFF2572 at 93.404 kb on - strand, within GFF2572 at 93.450 kb on - strand, within GFF2572 at 93.450 kb on - strand, within GFF2572 at 94.123 kb on - strand, within GFF2573 at 94.693 kb on - strand, within GFF2573 at 94.979 kb on + strand at 95.126 kb on + strand at 95.138 kb on + strand at 95.213 kb on + strand, within GFF2574 at 95.214 kb on - strand, within GFF2574 at 95.262 kb on - strand, within GFF2574 at 95.310 kb on - strand, within GFF2574 at 95.391 kb on + strand, within GFF2574 at 95.392 kb on - strand, within GFF2574 at 95.459 kb on - strand, within GFF2574 at 95.488 kb on + strand, within GFF2574 at 95.488 kb on + strand, within GFF2574 at 95.494 kb on - strand, within GFF2574 at 95.585 kb on + strand, within GFF2574 at 95.597 kb on - strand, within GFF2574 at 95.678 kb on + strand, within GFF2574 at 95.745 kb on + strand at 95.746 kb on - strand at 95.746 kb on - strand at 95.746 kb on - strand at 95.746 kb on - strand at 95.754 kb on + strand at 95.787 kb on + strand at 95.787 kb on + strand at 95.787 kb on + strand at 95.787 kb on + strand at 95.787 kb on + strand at 95.788 kb on - strand at 95.789 kb on + strand at 95.790 kb on - strand at 95.790 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 8C2_phage 15 MOI remove 93,032 + -0.5 93,153 - -2.9 93,242 + GFF2572 0.20 -1.7 93,242 + GFF2572 0.20 +0.5 93,248 - GFF2572 0.21 -0.6 93,263 + GFF2572 0.22 -0.0 93,305 - GFF2572 0.27 +0.8 93,320 + GFF2572 0.29 +0.2 93,404 - GFF2572 0.38 -0.2 93,450 - GFF2572 0.43 -0.2 93,450 - GFF2572 0.43 -1.9 94,123 - GFF2573 0.15 -1.5 94,693 - GFF2573 0.83 -1.8 94,979 + -0.2 95,126 + +0.1 95,138 + -0.9 95,213 + GFF2574 0.14 +0.3 95,214 - GFF2574 0.15 +0.3 95,262 - GFF2574 0.22 -2.0 95,310 - GFF2574 0.30 -1.7 95,391 + GFF2574 0.42 -0.7 95,392 - GFF2574 0.43 -0.7 95,459 - GFF2574 0.53 +0.1 95,488 + GFF2574 0.58 -1.4 95,488 + GFF2574 0.58 -0.1 95,494 - GFF2574 0.59 -0.1 95,585 + GFF2574 0.73 +0.1 95,597 - GFF2574 0.75 -3.4 95,678 + GFF2574 0.88 -1.1 95,745 + +2.1 95,746 - -1.1 95,746 - +0.3 95,746 - +0.1 95,746 - -0.2 95,754 + +0.5 95,787 + +0.9 95,787 + -1.6 95,787 + +0.5 95,787 + -0.0 95,787 + +1.6 95,788 - +0.0 95,789 + -1.6 95,790 - -0.4 95,790 - -0.9
Or see this region's nucleotide sequence