Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4681 and Echvi_4682 are separated by 15 nucleotides Echvi_4682 and Echvi_4683 are separated by 492 nucleotides
Echvi_4681: Echvi_4681 - Thioredoxin reductase, at 5,602,755 to 5,603,759
_4681
Echvi_4682: Echvi_4682 - Ferredoxin, at 5,603,775 to 5,604,095
_4682
Echvi_4683: Echvi_4683 - Methylmalonyl-CoA mutase, N-terminal domain/subunit, at 5,604,588 to 5,606,645
_4683
Position (kb) 5603
5604
5605 Strain fitness (log2 ratio) -2
-1
0
1 at 5604.094 kb on - strand at 5604.111 kb on - strand at 5604.115 kb on - strand at 5604.149 kb on - strand at 5604.231 kb on - strand at 5604.258 kb on + strand at 5604.259 kb on - strand at 5604.386 kb on + strand at 5604.447 kb on - strand at 5604.447 kb on - strand at 5604.454 kb on - strand at 5604.461 kb on - strand at 5604.481 kb on + strand at 5604.481 kb on + strand at 5604.481 kb on + strand at 5604.482 kb on - strand at 5604.482 kb on - strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.491 kb on - strand at 5604.491 kb on - strand at 5604.500 kb on + strand at 5604.549 kb on + strand at 5604.550 kb on - strand at 5604.550 kb on - strand at 5604.553 kb on + strand at 5604.560 kb on + strand at 5604.560 kb on + strand at 5604.561 kb on - strand at 5604.561 kb on - strand at 5604.589 kb on + strand at 5604.597 kb on + strand at 5604.678 kb on + strand at 5604.679 kb on - strand at 5604.729 kb on - strand at 5604.757 kb on - strand at 5604.757 kb on - strand at 5604.757 kb on - strand at 5604.777 kb on + strand at 5604.778 kb on - strand at 5605.009 kb on - strand, within Echvi_4683 at 5605.058 kb on - strand, within Echvi_4683 at 5605.058 kb on - strand, within Echvi_4683
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 5,604,094 - -1.3 5,604,111 - +0.2 5,604,115 - -0.8 5,604,149 - +0.1 5,604,231 - -0.2 5,604,258 + -1.8 5,604,259 - -0.2 5,604,386 + +0.2 5,604,447 - -1.3 5,604,447 - +0.0 5,604,454 - +1.2 5,604,461 - +0.4 5,604,481 + +0.5 5,604,481 + -0.8 5,604,481 + -0.7 5,604,482 - +0.1 5,604,482 - +1.3 5,604,490 + -1.7 5,604,490 + +0.9 5,604,490 + -0.2 5,604,490 + -0.5 5,604,490 + -0.1 5,604,491 - -0.6 5,604,491 - -1.3 5,604,500 + -0.4 5,604,549 + -1.2 5,604,550 - -0.6 5,604,550 - +0.8 5,604,553 + +0.4 5,604,560 + +0.4 5,604,560 + +0.3 5,604,561 - -0.6 5,604,561 - -1.8 5,604,589 + -0.0 5,604,597 + +0.2 5,604,678 + +0.3 5,604,679 - -0.6 5,604,729 - +1.0 5,604,757 - -0.8 5,604,757 - -0.3 5,604,757 - +1.4 5,604,777 + +0.9 5,604,778 - -1.9 5,605,009 - Echvi_4683 0.20 -0.6 5,605,058 - Echvi_4683 0.23 -0.1 5,605,058 - Echvi_4683 0.23 -1.6
Or see this region's nucleotide sequence