Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3612

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
4,284,412	+		Echvi_3610	0.80	+1.0
4,284,413	-		Echvi_3610	0.80	-1.7
4,284,420	+		Echvi_3610	0.81	+1.3
4,284,446	+		Echvi_3610	0.82	+0.8
4,284,446	+		Echvi_3610	0.82	-2.1
4,284,447	-		Echvi_3610	0.82	-3.1
4,284,449	+		Echvi_3610	0.82	-1.4
4,284,449	+		Echvi_3610	0.82	+0.7
4,284,450	-		Echvi_3610	0.83	-0.8
4,284,470	-		Echvi_3610	0.84	+0.3
4,284,470	-		Echvi_3610	0.84	-0.2
4,284,481	-		Echvi_3610	0.85	-0.5
4,284,571	+				-0.2
4,284,571	+				+0.3
4,284,572	-				-0.7
4,284,572	-				+0.6
4,284,572	-				+0.3
4,284,618	+				+0.9
4,284,621	+				-0.9
4,284,622	-				-0.5
4,284,622	-				-0.3
4,284,686	-				+3.2
4,284,687	+				+0.6
4,284,736	-				+0.5
4,284,766	-				+0.7
4,284,771	+				-2.7
4,284,821	+		Echvi_3611	0.22	-0.1
4,284,890	-		Echvi_3611	0.41	-0.5
4,284,904	+		Echvi_3611	0.45	+0.7
4,284,930	-		Echvi_3611	0.53	+1.4
4,284,941	+		Echvi_3611	0.56	-0.4
4,284,951	+		Echvi_3611	0.58	-1.0
4,285,011	+		Echvi_3611	0.75	+0.9
4,285,011	+		Echvi_3611	0.75	+0.3
4,285,017	+		Echvi_3611	0.77	+0.6
4,285,017	+		Echvi_3611	0.77	-0.1
4,285,018	-		Echvi_3611	0.77	-0.1
4,285,018	-		Echvi_3611	0.77	-1.0
4,285,022	+		Echvi_3611	0.78	+0.4
4,285,023	-		Echvi_3611	0.78	-0.4
4,285,081	-				-0.9
4,285,087	-				+0.3
4,285,136	-				+0.6
4,285,157	+				+0.3
4,285,162	-				-0.1
4,285,163	+				+1.4
4,285,164	-				+0.6
4,285,179	-				-0.6
4,285,183	-				-2.2
4,285,185	-				+0.8
4,285,185	-				-0.2
4,285,290	+				+1.3
4,285,290	+				+1.6
4,285,293	+				-0.5
4,285,372	+				-0.2
4,285,372	+				-0.0
4,285,373	-				-0.8
4,285,387	+				-0.3
4,285,387	+				+0.7
4,285,387	+				-2.2
4,285,387	+				-1.0
4,285,388	-				-0.7
4,285,394	-				-1.9
4,285,416	+				-0.8
4,285,417	-				-0.4
4,285,417	-				-1.0
4,285,502	+				-0.5
4,285,502	+				-2.3
4,285,503	-				-2.2
4,285,503	-				-0.2
4,285,561	+				+0.1
4,285,655	+		Echvi_3612	0.15	-1.9
4,285,674	+		Echvi_3612	0.16	-1.2
4,285,727	+		Echvi_3612	0.19	-1.2
4,285,727	+		Echvi_3612	0.19	+0.1
4,285,791	-		Echvi_3612	0.23	+0.3
4,285,811	-		Echvi_3612	0.24	-0.5
4,285,840	+		Echvi_3612	0.26	+0.7
4,285,841	-		Echvi_3612	0.26	+1.1
4,285,900	-		Echvi_3612	0.30	-0.7
4,285,926	+		Echvi_3612	0.31	-2.6
4,285,926	+		Echvi_3612	0.31	-1.1
4,285,926	+		Echvi_3612	0.31	-0.0
4,285,927	-		Echvi_3612	0.31	+0.8
4,285,947	+		Echvi_3612	0.32	-0.7
4,285,948	-		Echvi_3612	0.32	+0.3
4,286,013	-		Echvi_3612	0.36	-0.4
4,286,022	+		Echvi_3612	0.37	-1.0
4,286,022	+		Echvi_3612	0.37	-2.1
4,286,023	-		Echvi_3612	0.37	-1.8
4,286,025	-		Echvi_3612	0.37	+0.1
4,286,027	-		Echvi_3612	0.37	-1.3
4,286,078	-		Echvi_3612	0.40	+0.2
4,286,194	+		Echvi_3612	0.47	-0.7
4,286,194	+		Echvi_3612	0.47	-1.1
4,286,195	-		Echvi_3612	0.47	-0.9
4,286,257	-		Echvi_3612	0.51	+0.1
4,286,338	-		Echvi_3612	0.56	+1.1
4,286,359	+		Echvi_3612	0.57	+0.2
4,286,359	+		Echvi_3612	0.57	-1.0
4,286,371	+		Echvi_3612	0.58	-1.1
4,286,371	+		Echvi_3612	0.58	+1.3
4,286,565	+		Echvi_3612	0.70	-1.3
4,286,681	+		Echvi_3612	0.77	+0.0
4,286,688	-		Echvi_3612	0.77	-0.7
4,286,693	+		Echvi_3612	0.77	+0.3
4,286,693	+		Echvi_3612	0.77	+1.5
4,286,693	+		Echvi_3612	0.77	-1.2
4,286,693	+		Echvi_3612	0.77	-1.5
4,286,699	-		Echvi_3612	0.78	+1.2
4,286,756	+				+1.1
4,286,756	+		Echvi_3612	0.81	-1.5
4,287,005	-				-0.5
4,287,063	-				+0.8
4,287,087	+				-1.1
4,287,092	+				-0.7
4,287,092	+				-1.2
4,287,092	+				+0.6
4,287,093	-				+1.9
4,287,093	-				-2.2
4,287,093	-				-0.4
4,287,093	-				+0.0
4,287,093	-				-2.2
4,287,094	+				+0.3
4,287,094	+				+1.3
4,287,094	+				-1.6
4,287,095	-				-1.2
4,287,095	-				-1.0
4,287,095	-				-3.6
4,287,095	-				-0.4
4,287,095	-				-0.5
4,287,109	-				-2.7
4,287,159	+				-0.2
4,287,159	+				-1.2
4,287,160	-				-1.9
4,287,160	-				-0.9
4,287,160	-				+1.4
4,287,219	+		Echvi_3613	0.10	-1.0
4,287,219	+		Echvi_3613	0.10	-0.5
4,287,431	+		Echvi_3613	0.26	+1.1
4,287,431	+		Echvi_3613	0.26	+1.3
4,287,432	-		Echvi_3613	0.26	-0.5
4,287,432	-		Echvi_3613	0.26	-0.3
4,287,432	-		Echvi_3613	0.26	-0.6
4,287,525	-		Echvi_3613	0.33	+0.6
4,287,589	-		Echvi_3613	0.37	-1.5
4,287,716	+		Echvi_3613	0.46	-0.1
4,287,717	-		Echvi_3613	0.46	-0.2
4,287,746	-		Echvi_3613	0.49	-1.4
4,287,764	+		Echvi_3613	0.50	-0.1
4,287,765	-		Echvi_3613	0.50	+0.2
4,287,777	+		Echvi_3613	0.51	-2.0
4,287,777	+		Echvi_3613	0.51	-1.8
4,287,831	-		Echvi_3613	0.55	+0.1
4,287,864	+		Echvi_3613	0.57	+0.8
4,287,864	+		Echvi_3613	0.57	+3.1
4,287,864	+		Echvi_3613	0.57	-1.5
4,287,864	+		Echvi_3613	0.57	+3.1
4,287,864	+		Echvi_3613	0.57	+0.3
4,287,864	+		Echvi_3613	0.57	+0.9
4,287,864	+		Echvi_3613	0.57	-0.1
4,287,865	-		Echvi_3613	0.57	-0.7
4,287,865	-		Echvi_3613	0.57	-0.0
4,287,865	-		Echvi_3613	0.57	+3.1
4,287,865	-		Echvi_3613	0.57	-0.8
4,287,865	-		Echvi_3613	0.57	-1.5
4,287,868	+		Echvi_3613	0.57	-0.7
4,287,898	+		Echvi_3613	0.60	-0.2
4,287,919	+		Echvi_3613	0.61	-0.2
4,287,919	+		Echvi_3613	0.61	-0.6
4,287,920	-		Echvi_3613	0.61	+0.0
4,287,925	-		Echvi_3613	0.62	-0.0
4,287,944	+		Echvi_3613	0.63	-2.3
4,287,944	+		Echvi_3613	0.63	-1.8
4,287,946	+		Echvi_3613	0.63	-2.2
4,287,947	-		Echvi_3613	0.63	-0.0
4,287,983	+		Echvi_3613	0.66	-0.9
4,287,984	-		Echvi_3613	0.66	+0.5
4,287,985	+		Echvi_3613	0.66	-0.5
4,287,985	+		Echvi_3613	0.66	+0.1
4,287,985	+		Echvi_3613	0.66	-0.7
4,287,986	-		Echvi_3613	0.66	-0.8
4,287,998	+		Echvi_3613	0.67	-0.5
4,287,999	-		Echvi_3613	0.67	-0.7
4,288,013	+		Echvi_3613	0.68	-1.7
4,288,014	-		Echvi_3613	0.68	+0.3
4,288,014	-		Echvi_3613	0.68	+0.3
4,288,045	-		Echvi_3613	0.70	-2.0