Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3471

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
4,109,079	+		Echvi_3469	0.65	-3.1
4,109,080	-		Echvi_3469	0.65	-0.5
4,109,088	+		Echvi_3469	0.66	-1.8
4,109,088	+		Echvi_3469	0.66	-1.5
4,109,088	+		Echvi_3469	0.66	-2.7
4,109,089	-		Echvi_3469	0.66	-0.4
4,109,089	-		Echvi_3469	0.66	-1.7
4,109,089	-		Echvi_3469	0.66	-3.4
4,109,089	-		Echvi_3469	0.66	-0.9
4,109,102	+		Echvi_3469	0.67	-0.9
4,109,103	-		Echvi_3469	0.67	-0.9
4,109,118	-		Echvi_3469	0.69	-1.3
4,109,174	+		Echvi_3469	0.76	-1.3
4,109,174	+		Echvi_3469	0.76	-1.3
4,109,175	-		Echvi_3469	0.76	-0.8
4,109,236	-		Echvi_3469	0.83	-0.4
4,109,236	-		Echvi_3469	0.83	-2.0
4,109,278	+		Echvi_3469	0.88	-0.7
4,109,352	-				+1.1
4,109,372	-				-1.0
4,109,381	-				-0.1
4,109,387	-				+0.2
4,109,390	-				-0.4
4,109,395	-				+0.6
4,109,405	-				-1.2
4,109,407	+				-1.9
4,109,408	-				+0.4
4,109,432	+				-0.9
4,109,458	+				-2.5
4,109,458	+				+0.0
4,109,486	-				-0.0
4,109,490	-				+0.2
4,109,536	+		Echvi_3470	0.15	-0.0
4,109,537	-		Echvi_3470	0.15	+0.1
4,109,541	+		Echvi_3470	0.16	-0.4
4,109,542	-		Echvi_3470	0.16	-1.3
4,109,545	+		Echvi_3470	0.17	-0.6
4,109,556	+		Echvi_3470	0.19	-0.6
4,109,557	-		Echvi_3470	0.19	-1.1
4,109,589	+		Echvi_3470	0.24	-3.3
4,109,589	+		Echvi_3470	0.24	-2.1
4,109,589	+		Echvi_3470	0.24	-2.0
4,109,589	+		Echvi_3470	0.24	-2.9
4,109,590	-		Echvi_3470	0.24	+0.7
4,109,597	+		Echvi_3470	0.25	+2.1
4,109,597	+		Echvi_3470	0.25	-1.6
4,109,598	-		Echvi_3470	0.25	+0.7
4,109,635	+		Echvi_3470	0.31	-1.2
4,109,653	+		Echvi_3470	0.34	-0.5
4,109,653	+		Echvi_3470	0.34	-0.7
4,109,680	-		Echvi_3470	0.39	+0.8
4,109,686	-				+1.1
4,109,714	+		Echvi_3470	0.44	-0.8
4,109,722	+		Echvi_3470	0.46	-1.0
4,109,768	-		Echvi_3470	0.53	-1.6
4,109,896	+		Echvi_3470	0.74	-1.3
4,109,897	-		Echvi_3470	0.74	+0.9
4,109,897	-		Echvi_3470	0.74	+1.6
4,109,897	-		Echvi_3470	0.74	-0.2
4,109,899	-		Echvi_3470	0.74	-1.9
4,109,912	+		Echvi_3470	0.76	-1.7
4,109,946	-		Echvi_3470	0.82	-0.1
4,109,963	+		Echvi_3470	0.85	-0.2
4,109,966	+		Echvi_3470	0.85	-1.7
4,109,980	+		Echvi_3470	0.87	-0.6
4,109,986	-		Echvi_3470	0.88	-0.1
4,110,021	+				-0.2
4,110,022	-				+0.4
4,110,025	+				-1.9
4,110,032	+				-1.4
4,110,033	-				-1.2
4,110,044	-				+0.9
4,110,054	+				-1.8
4,110,071	+				-2.8
4,110,071	+				-0.2
4,110,071	+				+0.5
4,110,073	+				-1.0
4,110,073	+				-2.4
4,110,073	+				-2.4
4,110,081	-				+0.3
4,110,092	+				+0.3
4,110,093	-				+0.6
4,110,114	-				+0.3
4,110,175	+		Echvi_3471	0.13	-1.5
4,110,185	+		Echvi_3471	0.14	-3.2
4,110,186	-		Echvi_3471	0.14	+0.7
4,110,190	+		Echvi_3471	0.14	-0.6
4,110,233	-		Echvi_3471	0.19	+3.1
4,110,239	+		Echvi_3471	0.20	-1.4
4,110,239	+		Echvi_3471	0.20	-3.0
4,110,239	+		Echvi_3471	0.20	-0.5
4,110,239	+		Echvi_3471	0.20	+0.1
4,110,239	+		Echvi_3471	0.20	+0.9
4,110,239	+		Echvi_3471	0.20	+0.1
4,110,240	-		Echvi_3471	0.20	-0.2
4,110,240	-		Echvi_3471	0.20	+0.3
4,110,241	+		Echvi_3471	0.20	-0.4
4,110,241	+		Echvi_3471	0.20	-2.0
4,110,241	+		Echvi_3471	0.20	+0.9
4,110,241	+		Echvi_3471	0.20	-1.2
4,110,241	+		Echvi_3471	0.20	-1.3
4,110,241	+		Echvi_3471	0.20	-1.0
4,110,241	+		Echvi_3471	0.20	-2.7
4,110,241	+		Echvi_3471	0.20	+0.1
4,110,241	+		Echvi_3471	0.20	-2.0
4,110,242	-		Echvi_3471	0.20	-0.2
4,110,242	-		Echvi_3471	0.20	+1.0
4,110,242	-		Echvi_3471	0.20	-0.3
4,110,284	+		Echvi_3471	0.25	-0.7
4,110,284	+		Echvi_3471	0.25	-0.8
4,110,351	+		Echvi_3471	0.32	-2.9
4,110,351	+		Echvi_3471	0.32	-0.2
4,110,351	+		Echvi_3471	0.32	+0.8
4,110,351	+		Echvi_3471	0.32	-1.8
4,110,352	-		Echvi_3471	0.32	+0.6
4,110,408	-		Echvi_3471	0.38	-1.6
4,110,452	-		Echvi_3471	0.43	+0.3
4,110,457	+		Echvi_3471	0.43	-1.2
4,110,457	+		Echvi_3471	0.43	-1.2
4,110,505	+		Echvi_3471	0.49	-0.6
4,110,506	-		Echvi_3471	0.49	+1.5
4,110,571	-		Echvi_3471	0.56	-0.0
4,110,573	+		Echvi_3471	0.56	-0.7
4,110,573	+		Echvi_3471	0.56	-1.8
4,110,576	+		Echvi_3471	0.56	+0.6
4,110,623	-		Echvi_3471	0.61	+1.9
4,110,623	-		Echvi_3471	0.61	+1.0
4,110,665	+		Echvi_3471	0.66	-2.1
4,110,700	-		Echvi_3471	0.70	-0.7
4,110,855	-		Echvi_3471	0.87	+2.5
4,110,873	-		Echvi_3471	0.89	+0.2
4,110,915	+				-0.7
4,110,918	-				-0.9
4,110,975	+				-1.6
4,110,976	-				-0.1
4,110,976	-				+0.6
4,110,979	+				-0.3
4,110,983	+				+0.4
4,111,000	+				+0.8
4,111,058	+				+0.0
4,111,058	+				+0.1
4,111,127	+		Echvi_3472	0.16	-0.2
4,111,127	+		Echvi_3472	0.16	+0.3
4,111,127	+		Echvi_3472	0.16	+1.1
4,111,128	-		Echvi_3472	0.16	+0.1
4,111,128	-		Echvi_3472	0.16	+0.1
4,111,129	+		Echvi_3472	0.16	+1.1
4,111,130	-		Echvi_3472	0.16	+1.5
4,111,130	-		Echvi_3472	0.16	-0.5
4,111,206	+		Echvi_3472	0.25	+0.9
4,111,220	-		Echvi_3472	0.27	+0.9
4,111,289	+		Echvi_3472	0.35	-0.0
4,111,363	-		Echvi_3472	0.44	-0.3
4,111,384	-		Echvi_3472	0.47	-0.3
4,111,469	+		Echvi_3472	0.57	-2.0
4,111,484	-		Echvi_3472	0.59	+0.4
4,111,488	+		Echvi_3472	0.59	+0.3
4,111,488	+		Echvi_3472	0.59	+2.0
4,111,488	+		Echvi_3472	0.59	+0.7
4,111,488	+		Echvi_3472	0.59	+0.3
4,111,489	-		Echvi_3472	0.59	+0.8
4,111,489	-		Echvi_3472	0.59	+0.4
4,111,640	+		Echvi_3472	0.77	-3.5
4,111,641	-		Echvi_3472	0.77	+0.4
4,111,641	-		Echvi_3472	0.77	+0.2
4,111,647	+		Echvi_3472	0.78	+0.6
4,111,668	+		Echvi_3472	0.81	+0.1
4,111,669	-		Echvi_3472	0.81	-0.2
4,111,669	-		Echvi_3472	0.81	+1.4
4,111,689	-		Echvi_3472	0.83	+2.0
4,111,726	+		Echvi_3472	0.88	-0.6
4,111,787	+				-1.4
4,111,788	-				+0.0
4,111,788	-				-0.2
4,111,788	-				-1.1
4,111,827	-				-0.2
4,111,827	-				+0.8
4,111,835	+				-0.8
4,111,836	-				+0.6
4,111,841	+				+0.3
4,111,841	+				-0.9
4,111,842	-				+0.4
4,111,842	-				-0.2
4,111,843	+				+0.3
4,111,844	-				+1.4
4,111,844	-				+1.1
4,111,935	-				-1.4
4,111,943	+				+0.4