Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1076 and Echvi_1077 overlap by 41 nucleotides Echvi_1077 and Echvi_1078 are separated by 527 nucleotides
Echvi_1076: Echvi_1076 - hypothetical protein, at 1,237,399 to 1,239,699
_1076
Echvi_1077: Echvi_1077 - hypothetical protein, at 1,239,659 to 1,240,657
_1077
Echvi_1078: Echvi_1078 - Protein-L-isoaspartate carboxylmethyltransferase, at 1,241,185 to 1,241,850
_1078
Position (kb)
1239
1240
1241 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1238.684 kb on + strand, within Echvi_1076 at 1238.781 kb on + strand, within Echvi_1076 at 1238.802 kb on + strand, within Echvi_1076 at 1238.804 kb on + strand, within Echvi_1076 at 1238.805 kb on - strand, within Echvi_1076 at 1238.807 kb on + strand, within Echvi_1076 at 1238.807 kb on + strand, within Echvi_1076 at 1238.807 kb on + strand, within Echvi_1076 at 1238.900 kb on + strand, within Echvi_1076 at 1238.900 kb on + strand, within Echvi_1076 at 1238.900 kb on + strand, within Echvi_1076 at 1238.906 kb on + strand, within Echvi_1076 at 1238.906 kb on + strand, within Echvi_1076 at 1238.906 kb on + strand, within Echvi_1076 at 1238.906 kb on + strand, within Echvi_1076 at 1238.906 kb on + strand, within Echvi_1076 at 1238.907 kb on - strand, within Echvi_1076 at 1238.907 kb on - strand, within Echvi_1076 at 1238.907 kb on - strand, within Echvi_1076 at 1238.915 kb on - strand, within Echvi_1076 at 1238.915 kb on - strand, within Echvi_1076 at 1238.954 kb on + strand, within Echvi_1076 at 1238.955 kb on - strand, within Echvi_1076 at 1238.955 kb on - strand, within Echvi_1076 at 1238.955 kb on - strand, within Echvi_1076 at 1238.955 kb on - strand, within Echvi_1076 at 1238.964 kb on + strand, within Echvi_1076 at 1238.990 kb on + strand, within Echvi_1076 at 1238.990 kb on + strand, within Echvi_1076 at 1238.991 kb on - strand, within Echvi_1076 at 1238.993 kb on + strand, within Echvi_1076 at 1238.993 kb on + strand, within Echvi_1076 at 1238.993 kb on + strand, within Echvi_1076 at 1238.994 kb on - strand, within Echvi_1076 at 1238.994 kb on - strand, within Echvi_1076 at 1238.994 kb on - strand, within Echvi_1076 at 1238.994 kb on - strand, within Echvi_1076 at 1238.994 kb on - strand, within Echvi_1076 at 1238.994 kb on - strand, within Echvi_1076 at 1238.996 kb on - strand, within Echvi_1076 at 1239.009 kb on - strand, within Echvi_1076 at 1239.026 kb on + strand, within Echvi_1076 at 1239.026 kb on + strand, within Echvi_1076 at 1239.027 kb on - strand, within Echvi_1076 at 1239.028 kb on + strand, within Echvi_1076 at 1239.028 kb on + strand, within Echvi_1076 at 1239.028 kb on + strand, within Echvi_1076 at 1239.028 kb on + strand, within Echvi_1076 at 1239.029 kb on - strand, within Echvi_1076 at 1239.029 kb on - strand, within Echvi_1076 at 1239.051 kb on + strand, within Echvi_1076 at 1239.052 kb on - strand, within Echvi_1076 at 1239.052 kb on - strand, within Echvi_1076 at 1239.107 kb on + strand, within Echvi_1076 at 1239.108 kb on - strand, within Echvi_1076 at 1239.108 kb on - strand, within Echvi_1076 at 1239.115 kb on + strand, within Echvi_1076 at 1239.115 kb on + strand, within Echvi_1076 at 1239.116 kb on - strand, within Echvi_1076 at 1239.118 kb on + strand, within Echvi_1076 at 1239.167 kb on + strand, within Echvi_1076 at 1239.190 kb on + strand, within Echvi_1076 at 1239.191 kb on - strand, within Echvi_1076 at 1239.191 kb on - strand, within Echvi_1076 at 1239.265 kb on + strand, within Echvi_1076 at 1239.265 kb on + strand, within Echvi_1076 at 1239.384 kb on + strand, within Echvi_1076 at 1239.384 kb on + strand, within Echvi_1076 at 1239.385 kb on - strand, within Echvi_1076 at 1239.385 kb on - strand, within Echvi_1076 at 1239.385 kb on - strand, within Echvi_1076 at 1239.385 kb on - strand, within Echvi_1076 at 1239.388 kb on + strand, within Echvi_1076 at 1239.389 kb on - strand, within Echvi_1076 at 1239.425 kb on - strand, within Echvi_1076 at 1239.425 kb on - strand, within Echvi_1076 at 1239.425 kb on - strand, within Echvi_1076 at 1239.425 kb on - strand, within Echvi_1076 at 1239.425 kb on - strand, within Echvi_1076 at 1239.456 kb on - strand, within Echvi_1076 at 1239.456 kb on - strand, within Echvi_1076 at 1239.522 kb on - strand at 1239.522 kb on - strand at 1239.522 kb on - strand at 1239.524 kb on + strand at 1239.524 kb on + strand at 1239.572 kb on + strand at 1239.573 kb on - strand at 1239.608 kb on + strand at 1239.608 kb on + strand at 1239.608 kb on + strand at 1239.608 kb on + strand at 1239.638 kb on + strand at 1239.639 kb on - strand at 1239.674 kb on - strand at 1239.837 kb on + strand, within Echvi_1077 at 1239.922 kb on + strand, within Echvi_1077 at 1239.964 kb on + strand, within Echvi_1077 at 1239.965 kb on - strand, within Echvi_1077 at 1239.965 kb on - strand, within Echvi_1077 at 1240.025 kb on + strand, within Echvi_1077 at 1240.026 kb on - strand, within Echvi_1077 at 1240.030 kb on + strand, within Echvi_1077 at 1240.030 kb on + strand, within Echvi_1077 at 1240.030 kb on + strand, within Echvi_1077 at 1240.030 kb on + strand, within Echvi_1077 at 1240.030 kb on + strand, within Echvi_1077 at 1240.031 kb on - strand, within Echvi_1077 at 1240.031 kb on - strand, within Echvi_1077 at 1240.031 kb on - strand, within Echvi_1077 at 1240.031 kb on - strand, within Echvi_1077 at 1240.032 kb on + strand, within Echvi_1077 at 1240.032 kb on + strand, within Echvi_1077 at 1240.032 kb on + strand, within Echvi_1077 at 1240.032 kb on + strand, within Echvi_1077 at 1240.032 kb on + strand, within Echvi_1077 at 1240.032 kb on + strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.033 kb on - strand, within Echvi_1077 at 1240.036 kb on + strand, within Echvi_1077 at 1240.036 kb on + strand, within Echvi_1077 at 1240.037 kb on - strand, within Echvi_1077 at 1240.037 kb on - strand, within Echvi_1077 at 1240.037 kb on - strand, within Echvi_1077 at 1240.037 kb on - strand, within Echvi_1077 at 1240.037 kb on - strand, within Echvi_1077 at 1240.038 kb on + strand, within Echvi_1077 at 1240.039 kb on - strand, within Echvi_1077 at 1240.040 kb on + strand, within Echvi_1077 at 1240.099 kb on + strand, within Echvi_1077 at 1240.102 kb on + strand, within Echvi_1077 at 1240.102 kb on + strand, within Echvi_1077 at 1240.102 kb on + strand, within Echvi_1077 at 1240.103 kb on - strand, within Echvi_1077 at 1240.103 kb on - strand, within Echvi_1077 at 1240.103 kb on - strand, within Echvi_1077 at 1240.103 kb on - strand, within Echvi_1077 at 1240.103 kb on - strand, within Echvi_1077 at 1240.104 kb on + strand, within Echvi_1077 at 1240.104 kb on + strand, within Echvi_1077 at 1240.105 kb on - strand, within Echvi_1077 at 1240.105 kb on - strand, within Echvi_1077 at 1240.105 kb on - strand, within Echvi_1077 at 1240.105 kb on - strand, within Echvi_1077 at 1240.108 kb on - strand, within Echvi_1077 at 1240.108 kb on - strand, within Echvi_1077 at 1240.115 kb on + strand, within Echvi_1077 at 1240.115 kb on + strand, within Echvi_1077 at 1240.115 kb on + strand, within Echvi_1077 at 1240.115 kb on + strand, within Echvi_1077 at 1240.115 kb on + strand, within Echvi_1077 at 1240.116 kb on - strand, within Echvi_1077 at 1240.122 kb on + strand, within Echvi_1077 at 1240.155 kb on + strand, within Echvi_1077 at 1240.155 kb on + strand, within Echvi_1077 at 1240.217 kb on - strand, within Echvi_1077 at 1240.285 kb on - strand, within Echvi_1077 at 1240.309 kb on + strand, within Echvi_1077 at 1240.309 kb on + strand, within Echvi_1077 at 1240.310 kb on - strand, within Echvi_1077 at 1240.320 kb on + strand, within Echvi_1077 at 1240.320 kb on + strand, within Echvi_1077 at 1240.321 kb on - strand, within Echvi_1077 at 1240.389 kb on + strand, within Echvi_1077 at 1240.389 kb on + strand, within Echvi_1077 at 1240.389 kb on + strand, within Echvi_1077 at 1240.389 kb on + strand, within Echvi_1077 at 1240.390 kb on - strand, within Echvi_1077 at 1240.390 kb on - strand, within Echvi_1077 at 1240.391 kb on + strand, within Echvi_1077 at 1240.498 kb on - strand, within Echvi_1077 at 1240.498 kb on - strand, within Echvi_1077 at 1240.534 kb on - strand, within Echvi_1077 at 1240.661 kb on + strand at 1240.672 kb on + strand at 1240.672 kb on + strand at 1240.672 kb on + strand at 1240.673 kb on - strand at 1240.673 kb on - strand at 1240.694 kb on - strand at 1240.700 kb on + strand at 1240.704 kb on + strand at 1240.704 kb on + strand at 1240.704 kb on + strand at 1240.704 kb on + strand at 1240.705 kb on - strand at 1240.705 kb on - strand at 1240.706 kb on + strand at 1240.706 kb on + strand at 1240.707 kb on - strand at 1240.707 kb on - strand at 1240.707 kb on - strand at 1240.707 kb on - strand at 1240.709 kb on + strand at 1240.710 kb on - strand at 1240.730 kb on + strand at 1240.766 kb on - strand at 1240.775 kb on - strand at 1240.775 kb on - strand at 1240.775 kb on - strand at 1240.957 kb on + strand at 1240.980 kb on + strand at 1241.025 kb on - strand at 1241.045 kb on - strand at 1241.101 kb on + strand at 1241.101 kb on + strand at 1241.104 kb on + strand at 1241.104 kb on + strand at 1241.107 kb on + strand at 1241.132 kb on - strand at 1241.170 kb on + strand at 1241.176 kb on + strand at 1241.185 kb on - strand at 1241.214 kb on + strand at 1241.504 kb on - strand, within Echvi_1078 at 1241.509 kb on + strand, within Echvi_1078 at 1241.509 kb on + strand, within Echvi_1078 at 1241.510 kb on - strand, within Echvi_1078 at 1241.575 kb on + strand, within Echvi_1078 at 1241.612 kb on + strand, within Echvi_1078
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,238,684 + Echvi_1076 0.56 -0.6 1,238,781 + Echvi_1076 0.60 -0.6 1,238,802 + Echvi_1076 0.61 +0.3 1,238,804 + Echvi_1076 0.61 +0.2 1,238,805 - Echvi_1076 0.61 -0.3 1,238,807 + Echvi_1076 0.61 +1.8 1,238,807 + Echvi_1076 0.61 -0.3 1,238,807 + Echvi_1076 0.61 -0.5 1,238,900 + Echvi_1076 0.65 +0.2 1,238,900 + Echvi_1076 0.65 -0.8 1,238,900 + Echvi_1076 0.65 -0.3 1,238,906 + Echvi_1076 0.65 +1.4 1,238,906 + Echvi_1076 0.65 -0.9 1,238,906 + Echvi_1076 0.65 -1.1 1,238,906 + Echvi_1076 0.65 +0.9 1,238,906 + Echvi_1076 0.65 +1.8 1,238,907 - Echvi_1076 0.66 -0.1 1,238,907 - Echvi_1076 0.66 -0.1 1,238,907 - Echvi_1076 0.66 -1.3 1,238,915 - Echvi_1076 0.66 -0.1 1,238,915 - Echvi_1076 0.66 -0.2 1,238,954 + Echvi_1076 0.68 -0.0 1,238,955 - Echvi_1076 0.68 -1.3 1,238,955 - Echvi_1076 0.68 -0.5 1,238,955 - Echvi_1076 0.68 -0.2 1,238,955 - Echvi_1076 0.68 -1.2 1,238,964 + Echvi_1076 0.68 +0.3 1,238,990 + Echvi_1076 0.69 -2.5 1,238,990 + Echvi_1076 0.69 -0.5 1,238,991 - Echvi_1076 0.69 -0.4 1,238,993 + Echvi_1076 0.69 -0.3 1,238,993 + Echvi_1076 0.69 -1.1 1,238,993 + Echvi_1076 0.69 +1.3 1,238,994 - Echvi_1076 0.69 +0.4 1,238,994 - Echvi_1076 0.69 +2.5 1,238,994 - Echvi_1076 0.69 -0.7 1,238,994 - Echvi_1076 0.69 +1.7 1,238,994 - Echvi_1076 0.69 -1.1 1,238,994 - Echvi_1076 0.69 -0.5 1,238,996 - Echvi_1076 0.69 -0.4 1,239,009 - Echvi_1076 0.70 +0.7 1,239,026 + Echvi_1076 0.71 -0.1 1,239,026 + Echvi_1076 0.71 +0.9 1,239,027 - Echvi_1076 0.71 +0.2 1,239,028 + Echvi_1076 0.71 -0.2 1,239,028 + Echvi_1076 0.71 -2.7 1,239,028 + Echvi_1076 0.71 +0.6 1,239,028 + Echvi_1076 0.71 -1.2 1,239,029 - Echvi_1076 0.71 +2.5 1,239,029 - Echvi_1076 0.71 +0.4 1,239,051 + Echvi_1076 0.72 -0.2 1,239,052 - Echvi_1076 0.72 +0.8 1,239,052 - Echvi_1076 0.72 +0.5 1,239,107 + Echvi_1076 0.74 +0.0 1,239,108 - Echvi_1076 0.74 -2.7 1,239,108 - Echvi_1076 0.74 +0.1 1,239,115 + Echvi_1076 0.75 -0.4 1,239,115 + Echvi_1076 0.75 -2.0 1,239,116 - Echvi_1076 0.75 +0.1 1,239,118 + Echvi_1076 0.75 +0.0 1,239,167 + Echvi_1076 0.77 -1.6 1,239,190 + Echvi_1076 0.78 +0.6 1,239,191 - Echvi_1076 0.78 +1.0 1,239,191 - Echvi_1076 0.78 +0.5 1,239,265 + Echvi_1076 0.81 +0.8 1,239,265 + Echvi_1076 0.81 +1.7 1,239,384 + Echvi_1076 0.86 +1.2 1,239,384 + Echvi_1076 0.86 -0.2 1,239,385 - Echvi_1076 0.86 +1.2 1,239,385 - Echvi_1076 0.86 +0.7 1,239,385 - Echvi_1076 0.86 +1.4 1,239,385 - Echvi_1076 0.86 +1.0 1,239,388 + Echvi_1076 0.86 +0.0 1,239,389 - Echvi_1076 0.86 +1.2 1,239,425 - Echvi_1076 0.88 -2.2 1,239,425 - Echvi_1076 0.88 -0.3 1,239,425 - Echvi_1076 0.88 +0.4 1,239,425 - Echvi_1076 0.88 +0.3 1,239,425 - Echvi_1076 0.88 +2.1 1,239,456 - Echvi_1076 0.89 -0.3 1,239,456 - Echvi_1076 0.89 +0.5 1,239,522 - -0.3 1,239,522 - +0.5 1,239,522 - -0.7 1,239,524 + +1.3 1,239,524 + -0.5 1,239,572 + -0.4 1,239,573 - -1.5 1,239,608 + -0.2 1,239,608 + -0.1 1,239,608 + +0.5 1,239,608 + -0.6 1,239,638 + -0.9 1,239,639 - +2.1 1,239,674 - -0.3 1,239,837 + Echvi_1077 0.18 +0.2 1,239,922 + Echvi_1077 0.26 +0.5 1,239,964 + Echvi_1077 0.31 +1.3 1,239,965 - Echvi_1077 0.31 +0.4 1,239,965 - Echvi_1077 0.31 +1.3 1,240,025 + Echvi_1077 0.37 +0.3 1,240,026 - Echvi_1077 0.37 +1.0 1,240,030 + Echvi_1077 0.37 +0.0 1,240,030 + Echvi_1077 0.37 +0.1 1,240,030 + Echvi_1077 0.37 -1.6 1,240,030 + Echvi_1077 0.37 -0.5 1,240,030 + Echvi_1077 0.37 -0.0 1,240,031 - Echvi_1077 0.37 +1.7 1,240,031 - Echvi_1077 0.37 +0.7 1,240,031 - Echvi_1077 0.37 +2.1 1,240,031 - Echvi_1077 0.37 +0.5 1,240,032 + Echvi_1077 0.37 -0.4 1,240,032 + Echvi_1077 0.37 -0.9 1,240,032 + Echvi_1077 0.37 -1.3 1,240,032 + Echvi_1077 0.37 +0.2 1,240,032 + Echvi_1077 0.37 +0.3 1,240,032 + Echvi_1077 0.37 -1.9 1,240,033 - Echvi_1077 0.37 +0.6 1,240,033 - Echvi_1077 0.37 +0.9 1,240,033 - Echvi_1077 0.37 -1.3 1,240,033 - Echvi_1077 0.37 +0.6 1,240,033 - Echvi_1077 0.37 -0.5 1,240,033 - Echvi_1077 0.37 +0.8 1,240,033 - Echvi_1077 0.37 +1.1 1,240,033 - Echvi_1077 0.37 +0.4 1,240,033 - Echvi_1077 0.37 +0.3 1,240,036 + Echvi_1077 0.38 +1.2 1,240,036 + Echvi_1077 0.38 +0.5 1,240,037 - Echvi_1077 0.38 +0.9 1,240,037 - Echvi_1077 0.38 +2.1 1,240,037 - Echvi_1077 0.38 +1.5 1,240,037 - Echvi_1077 0.38 -0.2 1,240,037 - Echvi_1077 0.38 +2.3 1,240,038 + Echvi_1077 0.38 -1.8 1,240,039 - Echvi_1077 0.38 +0.8 1,240,040 + Echvi_1077 0.38 +1.8 1,240,099 + Echvi_1077 0.44 +0.7 1,240,102 + Echvi_1077 0.44 -0.7 1,240,102 + Echvi_1077 0.44 -1.5 1,240,102 + Echvi_1077 0.44 -1.1 1,240,103 - Echvi_1077 0.44 -0.3 1,240,103 - Echvi_1077 0.44 +1.8 1,240,103 - Echvi_1077 0.44 +0.2 1,240,103 - Echvi_1077 0.44 -0.6 1,240,103 - Echvi_1077 0.44 +0.9 1,240,104 + Echvi_1077 0.45 -1.2 1,240,104 + Echvi_1077 0.45 +0.8 1,240,105 - Echvi_1077 0.45 +0.4 1,240,105 - Echvi_1077 0.45 +0.2 1,240,105 - Echvi_1077 0.45 +0.5 1,240,105 - Echvi_1077 0.45 -0.3 1,240,108 - Echvi_1077 0.45 +0.2 1,240,108 - Echvi_1077 0.45 +1.1 1,240,115 + Echvi_1077 0.46 -0.9 1,240,115 + Echvi_1077 0.46 -0.0 1,240,115 + Echvi_1077 0.46 -2.9 1,240,115 + Echvi_1077 0.46 +1.5 1,240,115 + Echvi_1077 0.46 +0.8 1,240,116 - Echvi_1077 0.46 +0.3 1,240,122 + Echvi_1077 0.46 +0.6 1,240,155 + Echvi_1077 0.50 -0.0 1,240,155 + Echvi_1077 0.50 -0.5 1,240,217 - Echvi_1077 0.56 +0.8 1,240,285 - Echvi_1077 0.63 -0.5 1,240,309 + Echvi_1077 0.65 -0.4 1,240,309 + Echvi_1077 0.65 +0.7 1,240,310 - Echvi_1077 0.65 +0.3 1,240,320 + Echvi_1077 0.66 -1.2 1,240,320 + Echvi_1077 0.66 -1.3 1,240,321 - Echvi_1077 0.66 +0.5 1,240,389 + Echvi_1077 0.73 +0.1 1,240,389 + Echvi_1077 0.73 +1.4 1,240,389 + Echvi_1077 0.73 +1.4 1,240,389 + Echvi_1077 0.73 +0.7 1,240,390 - Echvi_1077 0.73 +0.1 1,240,390 - Echvi_1077 0.73 +1.3 1,240,391 + Echvi_1077 0.73 -1.7 1,240,498 - Echvi_1077 0.84 +1.4 1,240,498 - Echvi_1077 0.84 -2.6 1,240,534 - Echvi_1077 0.88 +0.1 1,240,661 + -0.3 1,240,672 + -1.2 1,240,672 + +0.3 1,240,672 + +0.1 1,240,673 - +0.5 1,240,673 - -0.3 1,240,694 - +1.2 1,240,700 + +0.1 1,240,704 + +0.7 1,240,704 + -0.8 1,240,704 + +0.0 1,240,704 + -0.5 1,240,705 - +1.5 1,240,705 - +0.1 1,240,706 + -0.9 1,240,706 + -1.3 1,240,707 - -1.1 1,240,707 - +0.3 1,240,707 - +0.5 1,240,707 - -0.5 1,240,709 + +0.4 1,240,710 - +0.5 1,240,730 + +0.4 1,240,766 - -0.3 1,240,775 - +1.4 1,240,775 - +1.3 1,240,775 - -0.2 1,240,957 + -0.2 1,240,980 + -0.6 1,241,025 - -0.3 1,241,045 - -1.5 1,241,101 + -2.1 1,241,101 + +1.1 1,241,104 + +0.7 1,241,104 + -0.1 1,241,107 + +0.6 1,241,132 - +2.4 1,241,170 + +0.1 1,241,176 + +2.1 1,241,185 - +1.5 1,241,214 + -2.6 1,241,504 - Echvi_1078 0.48 -0.1 1,241,509 + Echvi_1078 0.49 -0.2 1,241,509 + Echvi_1078 0.49 +0.2 1,241,510 - Echvi_1078 0.49 -0.1 1,241,575 + Echvi_1078 0.59 +2.2 1,241,612 + Echvi_1078 0.64 +1.0
Or see this region's nucleotide sequence