Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1039

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
1,199,368	+				+0.5
1,199,368	+				-0.0
1,199,368	+				+0.1
1,199,368	+				-1.3
1,199,369	-				-1.6
1,199,369	-				+0.7
1,199,369	-				-0.7
1,199,369	-				-0.3
1,199,369	-				+1.0
1,199,372	+				-0.6
1,199,373	-				+0.2
1,199,402	+		Echvi_1037	0.11	-0.4
1,199,403	-		Echvi_1037	0.11	+1.5
1,199,456	-		Echvi_1037	0.23	+0.5
1,199,487	+		Echvi_1037	0.31	-0.0
1,199,496	+		Echvi_1037	0.33	+0.9
1,199,496	+		Echvi_1037	0.33	+0.8
1,199,553	-		Echvi_1037	0.46	+0.5
1,199,557	+		Echvi_1037	0.47	-0.1
1,199,583	+		Echvi_1037	0.53	+0.1
1,199,583	+		Echvi_1037	0.53	-0.2
1,199,584	-		Echvi_1037	0.53	+2.6
1,199,584	-		Echvi_1037	0.53	+0.3
1,199,584	-		Echvi_1037	0.53	-0.4
1,199,584	-		Echvi_1037	0.53	-0.5
1,199,655	+		Echvi_1037	0.69	+0.9
1,199,655	+		Echvi_1037	0.69	+0.3
1,199,655	+		Echvi_1037	0.69	-0.5
1,199,656	-		Echvi_1037	0.70	-0.2
1,199,656	-		Echvi_1037	0.70	+0.4
1,199,656	-		Echvi_1037	0.70	-0.5
1,199,661	-		Echvi_1037	0.71	+0.4
1,199,699	-		Echvi_1037	0.80	+0.3
1,199,699	-		Echvi_1037	0.80	+1.7
1,199,737	-		Echvi_1037	0.88	-0.3
1,199,744	+				-1.0
1,199,745	-				-0.3
1,199,745	-				-0.0
1,199,746	+				+0.5
1,199,746	+				-2.3
1,199,747	-				-2.0
1,199,747	-				-0.2
1,199,747	-				+1.3
1,199,747	-				-0.1
1,199,753	+				-1.5
1,199,857	+		Echvi_1038	0.28	+0.6
1,199,857	+		Echvi_1038	0.28	+0.1
1,199,858	-		Echvi_1038	0.28	+1.7
1,199,872	-		Echvi_1038	0.32	+0.4
1,199,913	+		Echvi_1038	0.43	+0.2
1,199,914	-		Echvi_1038	0.44	+0.6
1,199,914	-		Echvi_1038	0.44	+0.2
1,199,922	+		Echvi_1038	0.46	-0.4
1,199,952	+		Echvi_1038	0.54	+0.6
1,199,952	+		Echvi_1038	0.54	+0.4
1,199,953	-		Echvi_1038	0.54	+1.8
1,199,953	-		Echvi_1038	0.54	-1.8
1,200,109	-				+1.4
1,200,109	-				+0.4
1,200,109	-				+0.5
1,200,123	+				-1.1
1,200,139	-				+2.1
1,200,139	-				-0.5
1,200,139	-				-0.7
1,200,139	-				+0.3
1,200,142	+				-1.1
1,200,143	-				+1.1
1,200,158	+				-0.3
1,200,158	+				+0.6
1,200,159	-				+1.4
1,200,165	-				-2.0
1,200,171	+				-0.1
1,200,171	+				-0.9
1,200,171	+				-0.4
1,200,171	+				-0.2
1,200,172	-				+0.1
1,200,172	-				-0.4
1,200,172	-				+1.1
1,200,172	-				+1.2
1,200,172	-				-0.0
1,200,172	-				-0.5
1,200,175	+				-1.1
1,200,175	+				+0.9
1,200,175	+				+0.6
1,200,175	+				-0.1
1,200,175	+				+0.5
1,200,175	+				+0.5
1,200,176	-				+1.0
1,200,186	+				+0.1
1,200,186	+				-0.6
1,200,186	+				+0.1
1,200,186	+				-0.7
1,200,186	+				-0.4
1,200,186	+				-0.2
1,200,187	-				-0.7
1,200,187	-				+0.4
1,200,187	-				+0.4
1,200,187	-				-0.1
1,200,188	+				-0.4
1,200,188	+				-1.0
1,200,188	+				+0.0
1,200,189	-				+0.4
1,200,189	-				+1.1
1,200,189	-				+1.0
1,200,189	-				+0.0
1,200,189	-				+0.4
1,200,189	-				-0.8
1,200,189	-				+0.9
1,200,259	-				+0.7
1,200,261	+				+1.4
1,200,261	+				+0.4
1,200,261	+				-0.0
1,200,261	+				+0.6
1,200,261	+				-0.0
1,200,261	+				-0.6
1,200,262	-				-0.2
1,200,262	-				+0.7
1,200,262	-				+0.8
1,200,262	-				-0.6
1,200,262	-				+0.5
1,200,262	-				-0.5
1,200,262	-				+2.1
1,200,263	+				-1.6
1,200,263	+				+0.6
1,200,263	+				+0.7
1,200,263	+				-0.6
1,200,263	+				-2.7
1,200,263	+				+0.1
1,200,263	+				+1.1
1,200,264	-				+0.4
1,200,264	-				-0.8
1,200,264	-				-0.2
1,200,264	-				+0.9
1,200,264	-				+1.7
1,200,264	-				+1.1
1,200,264	-				+0.2
1,200,264	-				+1.0
1,200,265	-				+1.1
1,200,266	+				-0.0
1,200,266	+				+0.5
1,200,268	+				+0.3
1,200,269	-				+1.2
1,200,269	-				+0.1
1,200,269	-				-0.3
1,200,269	-				+0.2
1,200,313	+				+1.1
1,200,313	+				+0.0
1,200,314	-				-0.3
1,200,314	-				+0.6
1,200,314	-				+0.7
1,200,341	-				+0.1
1,200,359	+				-2.9
1,200,423	+		Echvi_1039	0.12	-0.5
1,200,423	+		Echvi_1039	0.12	-0.5
1,200,424	-		Echvi_1039	0.12	+1.5
1,200,424	-		Echvi_1039	0.12	+0.7
1,200,475	+		Echvi_1039	0.24	-0.6
1,200,475	+		Echvi_1039	0.24	+2.8
1,200,475	+		Echvi_1039	0.24	-1.0
1,200,475	+		Echvi_1039	0.24	-0.3
1,200,476	-		Echvi_1039	0.24	+0.1
1,200,476	-		Echvi_1039	0.24	-2.4
1,200,476	-		Echvi_1039	0.24	+1.0
1,200,504	+		Echvi_1039	0.30	-0.3
1,200,504	+		Echvi_1039	0.30	-0.9
1,200,505	-		Echvi_1039	0.30	-0.7
1,200,505	-		Echvi_1039	0.30	+1.6
1,200,505	-		Echvi_1039	0.30	+0.6
1,200,505	-		Echvi_1039	0.30	+0.3
1,200,507	+		Echvi_1039	0.31	+1.1
1,200,507	+		Echvi_1039	0.31	+0.4
1,200,508	-		Echvi_1039	0.31	+1.5
1,200,565	-		Echvi_1039	0.43	+1.0
1,200,628	+		Echvi_1039	0.57	+0.1
1,200,634	-		Echvi_1039	0.59	+0.9
1,200,650	+		Echvi_1039	0.62	+1.0
1,200,733	+		Echvi_1039	0.81	-1.2
1,200,733	+		Echvi_1039	0.81	+0.7
1,200,775	+				-0.5
1,200,775	+				+0.8
1,200,775	+				+0.4
1,200,775	+				+0.5
1,200,775	+				-0.2
1,200,775	+				-0.3
1,200,775	+				-0.5
1,200,776	-				-0.6
1,200,776	-				+1.3
1,200,776	-				-1.1
1,200,776	-				-1.0
1,200,776	-				-0.5
1,200,776	-				+0.5
1,200,776	-				-1.6
1,200,777	+				+0.9
1,200,777	+				-0.7
1,200,777	+				+0.5
1,200,778	-				+0.7
1,200,778	-				-0.8
1,200,778	-				-1.2
1,200,790	+				-0.8
1,200,791	-				+0.2
1,200,791	-				-0.7
1,200,791	-				-0.9
1,200,829	+				+0.1
1,200,830	-				+0.8
1,200,834	-				+0.8
1,200,834	-				-0.7
1,200,838	+				+1.2
1,200,839	-				+1.1
1,200,839	-				-0.9
1,200,839	-				+0.6
1,200,841	+				+1.4
1,200,842	-				+1.3
1,200,842	-				+0.8
1,200,842	-				-0.5
1,200,854	+				-0.8
1,200,906	+				+2.1
1,200,924	+				+1.6
1,200,924	+				+0.8
1,200,929	+				-0.9
1,200,929	+				-1.2
1,200,936	-				-0.2
1,200,953	+				-1.0
1,200,990	-				-0.3
1,200,991	+				+0.3
1,200,991	+				+0.0
1,200,991	+				-0.7
1,200,991	+				+0.1
1,200,991	+				+0.2
1,200,991	+				+0.3
1,200,991	+				+0.7
1,200,991	+				-0.3
1,200,992	-				-0.1
1,200,992	-				-0.2
1,200,992	-				-0.0
1,200,999	+				-2.0
1,200,999	+				+0.5
1,200,999	+				-0.3
1,201,000	-				+1.4
1,201,001	+				-0.9
1,201,001	+				-0.1
1,201,001	+				-0.4
1,201,001	+				-1.3
1,201,001	+				+2.7
1,201,002	-				+0.2
1,201,002	-				+0.6
1,201,002	-				-0.5
1,201,002	-				+0.4
1,201,002	-				-0.2
1,201,002	-				-0.6
1,201,007	+				-0.7
1,201,007	+				+1.7
1,201,007	+				-1.9
1,201,008	-				-0.8
1,201,008	-				+1.6
1,201,008	-				-0.5
1,201,008	-				-0.3
1,201,008	-				+2.1
1,201,037	-		Echvi_1040	0.13	+0.6
1,201,117	+		Echvi_1040	0.25	-1.1
1,201,117	+		Echvi_1040	0.25	-0.0
1,201,117	+		Echvi_1040	0.25	+0.8
1,201,118	-		Echvi_1040	0.25	+0.3
1,201,118	-		Echvi_1040	0.25	-0.9
1,201,118	-		Echvi_1040	0.25	-2.0
1,201,118	-		Echvi_1040	0.25	+1.6
1,201,132	+		Echvi_1040	0.27	-1.4
1,201,133	-		Echvi_1040	0.28	-0.1
1,201,136	+		Echvi_1040	0.28	+0.3
1,201,136	+		Echvi_1040	0.28	-0.4
1,201,137	-		Echvi_1040	0.28	+0.5
1,201,151	+		Echvi_1040	0.30	-0.8
1,201,152	-		Echvi_1040	0.31	-0.5
1,201,172	-		Echvi_1040	0.34	+0.1
1,201,264	+		Echvi_1040	0.48	-0.2
1,201,265	-		Echvi_1040	0.48	-0.3
1,201,265	-		Echvi_1040	0.48	-1.0
1,201,265	-		Echvi_1040	0.48	+0.2
1,201,299	+		Echvi_1040	0.54	-1.0
1,201,299	+		Echvi_1040	0.54	-0.0
1,201,300	-		Echvi_1040	0.54	+1.4
1,201,430	+		Echvi_1040	0.74	-0.5
1,201,431	-		Echvi_1040	0.74	-0.2
1,201,431	-		Echvi_1040	0.74	+0.1
1,201,450	-		Echvi_1040	0.77	-0.1
1,201,450	-		Echvi_1040	0.77	+0.5
1,201,536	+				+0.3
1,201,536	+				-0.9
1,201,537	-				+0.5
1,201,569	+				+1.3
1,201,570	-				+1.3
1,201,571	+				+0.8
1,201,571	+				-1.2
1,201,572	-				-0.4
1,201,572	-				+0.8
1,201,572	-				-1.0
1,201,593	+				+0.1
1,201,593	+				+0.1
1,201,593	+				+0.2
1,201,604	-				-2.3
1,201,604	-				-0.2
1,201,614	+				-1.6
1,201,656	-				+0.2
1,201,656	-				-1.1
1,201,665	-				+0.8
1,201,673	-				-0.2
1,201,711	+				-0.9
1,201,712	-				-1.3
1,201,712	-				-0.1
1,201,712	-				-2.3
1,201,719	+				+1.4
1,201,726	-				+1.8
1,201,726	-				-0.4
1,201,734	+				-0.0
1,201,735	-				+0.5
1,201,735	-				+0.5
1,201,750	-				-1.3
1,201,810	-				+1.3
1,201,810	-				-0.3
1,201,810	-				+1.0
1,201,810	-				-1.3
1,201,810	-				+0.7
1,201,813	-				-0.1
1,201,813	-				-0.1
1,201,813	-				-0.0
1,201,820	+				-0.7