Experiment: m.b. Ceftazidime 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00930 and CA264_00935 are separated by 103 nucleotides CA264_00935 and CA264_00940 are separated by 127 nucleotides CA264_00940 and CA264_00945 are separated by 89 nucleotides
CA264_00930: CA264_00930 - phosphorylase, at 199,188 to 200,045
_00930
CA264_00935: CA264_00935 - hypothetical protein, at 200,149 to 200,448
_00935
CA264_00940: CA264_00940 - hypothetical protein, at 200,576 to 200,875
_00940
CA264_00945: CA264_00945 - acyl-CoA reductase, at 200,965 to 201,975
_00945
Position (kb) 200
201 Strain fitness (log2 ratio) -2
-1
0
1 at 199.194 kb on - strand at 199.194 kb on - strand at 199.217 kb on + strand at 199.384 kb on - strand, within CA264_00930 at 199.384 kb on - strand, within CA264_00930 at 199.385 kb on + strand, within CA264_00930 at 199.386 kb on - strand, within CA264_00930 at 199.656 kb on - strand, within CA264_00930 at 199.658 kb on - strand, within CA264_00930 at 199.701 kb on + strand, within CA264_00930 at 199.739 kb on - strand, within CA264_00930 at 199.769 kb on + strand, within CA264_00930 at 199.769 kb on + strand, within CA264_00930 at 199.770 kb on - strand, within CA264_00930 at 199.846 kb on - strand, within CA264_00930 at 199.846 kb on - strand, within CA264_00930 at 199.846 kb on - strand, within CA264_00930 at 199.878 kb on - strand, within CA264_00930 at 199.908 kb on + strand, within CA264_00930 at 199.955 kb on + strand, within CA264_00930 at 199.961 kb on - strand at 200.086 kb on + strand at 200.087 kb on - strand at 200.135 kb on + strand at 200.157 kb on - strand at 200.157 kb on - strand at 200.157 kb on - strand at 200.253 kb on + strand, within CA264_00935 at 200.336 kb on + strand, within CA264_00935 at 200.336 kb on + strand, within CA264_00935 at 200.472 kb on + strand at 200.474 kb on + strand at 200.475 kb on - strand at 200.475 kb on - strand at 200.476 kb on + strand at 200.578 kb on - strand at 200.600 kb on - strand at 200.767 kb on + strand, within CA264_00940 at 200.767 kb on + strand, within CA264_00940 at 200.887 kb on + strand at 200.915 kb on + strand at 200.959 kb on - strand at 201.261 kb on - strand, within CA264_00945
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.001 mg/ml remove 199,194 - +0.4 199,194 - -1.6 199,217 + +0.3 199,384 - CA264_00930 0.23 +0.1 199,384 - CA264_00930 0.23 -0.1 199,385 + CA264_00930 0.23 +0.0 199,386 - CA264_00930 0.23 -0.5 199,656 - CA264_00930 0.55 -1.3 199,658 - CA264_00930 0.55 -1.2 199,701 + CA264_00930 0.60 +0.8 199,739 - CA264_00930 0.64 -1.8 199,769 + CA264_00930 0.68 -0.2 199,769 + CA264_00930 0.68 +0.3 199,770 - CA264_00930 0.68 -0.8 199,846 - CA264_00930 0.77 +0.3 199,846 - CA264_00930 0.77 -0.0 199,846 - CA264_00930 0.77 -0.3 199,878 - CA264_00930 0.80 +0.3 199,908 + CA264_00930 0.84 +0.5 199,955 + CA264_00930 0.89 +0.6 199,961 - +1.6 200,086 + -0.3 200,087 - +1.1 200,135 + -0.0 200,157 - +0.6 200,157 - -1.5 200,157 - -0.3 200,253 + CA264_00935 0.35 -0.3 200,336 + CA264_00935 0.62 +1.0 200,336 + CA264_00935 0.62 -0.4 200,472 + -1.2 200,474 + -0.4 200,475 - -0.0 200,475 - -0.3 200,476 + -0.3 200,578 - -0.7 200,600 - -0.3 200,767 + CA264_00940 0.64 +0.1 200,767 + CA264_00940 0.64 +0.4 200,887 + +0.7 200,915 + +0.3 200,959 - +1.2 201,261 - CA264_00945 0.29 -0.3
Or see this region's nucleotide sequence