Experiment: m.b. Lomefloxacin 0.0032 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1712 and B158DRAFT_1713 are separated by 13 nucleotides B158DRAFT_1713 and B158DRAFT_1714 are separated by 27 nucleotides B158DRAFT_1714 and B158DRAFT_1715 are separated by 2 nucleotides B158DRAFT_1715 and B158DRAFT_1716 overlap by 1 nucleotides
B158DRAFT_1712: B158DRAFT_1712 - hypothetical protein, at 1,787,521 to 1,788,528
_1712
B158DRAFT_1713: B158DRAFT_1713 - hypothetical protein, at 1,788,542 to 1,789,270
_1713
B158DRAFT_1714: B158DRAFT_1714 - hypothetical protein, at 1,789,298 to 1,789,897
_1714
B158DRAFT_1715: B158DRAFT_1715 - hypothetical protein, at 1,789,900 to 1,790,565
_1715
B158DRAFT_1716: B158DRAFT_1716 - hypothetical protein, at 1,790,565 to 1,791,479
_1716
Position (kb)
1789
1790 Strain fitness (log2 ratio)
-1
0
1 at 1788.305 kb on + strand, within B158DRAFT_1712 at 1788.311 kb on - strand, within B158DRAFT_1712 at 1788.311 kb on - strand, within B158DRAFT_1712 at 1788.381 kb on - strand, within B158DRAFT_1712 at 1788.439 kb on + strand at 1788.450 kb on + strand at 1788.458 kb on - strand at 1788.503 kb on - strand at 1788.504 kb on + strand at 1788.512 kb on - strand at 1788.512 kb on - strand at 1788.640 kb on - strand, within B158DRAFT_1713 at 1788.676 kb on + strand, within B158DRAFT_1713 at 1788.698 kb on - strand, within B158DRAFT_1713 at 1788.731 kb on - strand, within B158DRAFT_1713 at 1788.740 kb on + strand, within B158DRAFT_1713 at 1788.741 kb on - strand, within B158DRAFT_1713 at 1788.763 kb on - strand, within B158DRAFT_1713 at 1788.976 kb on + strand, within B158DRAFT_1713 at 1788.994 kb on - strand, within B158DRAFT_1713 at 1789.026 kb on - strand, within B158DRAFT_1713 at 1789.100 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.118 kb on - strand, within B158DRAFT_1713 at 1789.262 kb on - strand at 1789.276 kb on - strand at 1789.320 kb on + strand at 1789.737 kb on + strand, within B158DRAFT_1714 at 1789.737 kb on + strand, within B158DRAFT_1714 at 1789.737 kb on + strand, within B158DRAFT_1714 at 1789.745 kb on - strand, within B158DRAFT_1714 at 1789.745 kb on - strand, within B158DRAFT_1714 at 1789.745 kb on - strand, within B158DRAFT_1714 at 1789.781 kb on + strand, within B158DRAFT_1714 at 1789.789 kb on - strand, within B158DRAFT_1714 at 1789.807 kb on - strand, within B158DRAFT_1714 at 1789.850 kb on + strand at 1789.873 kb on - strand at 1790.087 kb on - strand, within B158DRAFT_1715 at 1790.245 kb on + strand, within B158DRAFT_1715 at 1790.277 kb on - strand, within B158DRAFT_1715 at 1790.294 kb on - strand, within B158DRAFT_1715 at 1790.311 kb on + strand, within B158DRAFT_1715 at 1790.554 kb on + strand at 1790.651 kb on + strand at 1790.651 kb on + strand at 1790.681 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.744 kb on + strand, within B158DRAFT_1716 at 1790.747 kb on - strand, within B158DRAFT_1716 at 1790.747 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.752 kb on - strand, within B158DRAFT_1716 at 1790.845 kb on + strand, within B158DRAFT_1716 at 1790.845 kb on + strand, within B158DRAFT_1716
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.0032 mM remove 1,788,305 + B158DRAFT_1712 0.78 -0.3 1,788,311 - B158DRAFT_1712 0.78 +0.1 1,788,311 - B158DRAFT_1712 0.78 -1.3 1,788,381 - B158DRAFT_1712 0.85 -0.2 1,788,439 + +0.1 1,788,450 + -0.8 1,788,458 - -0.3 1,788,503 - +0.6 1,788,504 + -0.2 1,788,512 - -0.3 1,788,512 - -0.5 1,788,640 - B158DRAFT_1713 0.13 -0.1 1,788,676 + B158DRAFT_1713 0.18 -0.0 1,788,698 - B158DRAFT_1713 0.21 -0.2 1,788,731 - B158DRAFT_1713 0.26 -1.3 1,788,740 + B158DRAFT_1713 0.27 -0.4 1,788,741 - B158DRAFT_1713 0.27 -0.3 1,788,763 - B158DRAFT_1713 0.30 -0.3 1,788,976 + B158DRAFT_1713 0.60 -0.2 1,788,994 - B158DRAFT_1713 0.62 -0.1 1,789,026 - B158DRAFT_1713 0.66 +0.3 1,789,100 + B158DRAFT_1713 0.77 -0.2 1,789,110 + B158DRAFT_1713 0.78 -0.1 1,789,110 + B158DRAFT_1713 0.78 -0.3 1,789,110 + B158DRAFT_1713 0.78 -0.5 1,789,118 - B158DRAFT_1713 0.79 -0.4 1,789,262 - +0.2 1,789,276 - -0.1 1,789,320 + -0.1 1,789,737 + B158DRAFT_1714 0.73 -0.3 1,789,737 + B158DRAFT_1714 0.73 -0.1 1,789,737 + B158DRAFT_1714 0.73 -0.3 1,789,745 - B158DRAFT_1714 0.74 -0.2 1,789,745 - B158DRAFT_1714 0.74 -0.3 1,789,745 - B158DRAFT_1714 0.74 -0.2 1,789,781 + B158DRAFT_1714 0.81 -0.0 1,789,789 - B158DRAFT_1714 0.82 -0.1 1,789,807 - B158DRAFT_1714 0.85 -0.5 1,789,850 + -0.1 1,789,873 - -0.1 1,790,087 - B158DRAFT_1715 0.28 +0.6 1,790,245 + B158DRAFT_1715 0.52 -0.1 1,790,277 - B158DRAFT_1715 0.57 -0.5 1,790,294 - B158DRAFT_1715 0.59 +0.2 1,790,311 + B158DRAFT_1715 0.62 -0.4 1,790,554 + -0.5 1,790,651 + +0.3 1,790,651 + +0.6 1,790,681 + B158DRAFT_1716 0.13 -0.6 1,790,744 + B158DRAFT_1716 0.20 -0.0 1,790,744 + B158DRAFT_1716 0.20 -0.2 1,790,744 + B158DRAFT_1716 0.20 +0.1 1,790,744 + B158DRAFT_1716 0.20 -0.6 1,790,744 + B158DRAFT_1716 0.20 -0.8 1,790,744 + B158DRAFT_1716 0.20 -0.5 1,790,744 + B158DRAFT_1716 0.20 -0.0 1,790,747 - B158DRAFT_1716 0.20 +0.2 1,790,747 - B158DRAFT_1716 0.20 -0.0 1,790,752 - B158DRAFT_1716 0.20 +0.3 1,790,752 - B158DRAFT_1716 0.20 +0.6 1,790,752 - B158DRAFT_1716 0.20 -0.8 1,790,752 - B158DRAFT_1716 0.20 +0.1 1,790,752 - B158DRAFT_1716 0.20 -0.5 1,790,752 - B158DRAFT_1716 0.20 -1.1 1,790,752 - B158DRAFT_1716 0.20 -0.2 1,790,752 - B158DRAFT_1716 0.20 +0.1 1,790,752 - B158DRAFT_1716 0.20 +0.1 1,790,752 - B158DRAFT_1716 0.20 +0.2 1,790,845 + B158DRAFT_1716 0.31 +0.4 1,790,845 + B158DRAFT_1716 0.31 +0.2
Or see this region's nucleotide sequence