Experiment: m.b. Lomefloxacin 0.0032 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0572 and B158DRAFT_0573 are separated by 3 nucleotides B158DRAFT_0573 and B158DRAFT_0574 are separated by 35 nucleotides B158DRAFT_0574 and B158DRAFT_0575 are separated by 28 nucleotides B158DRAFT_0575 and B158DRAFT_0576 are separated by 146 nucleotides
B158DRAFT_0572: B158DRAFT_0572 - rRNA methylases, at 577,206 to 577,898
_0572
B158DRAFT_0573: B158DRAFT_0573 - endoribonuclease L-PSP, putative, at 577,902 to 578,288
_0573
B158DRAFT_0574: B158DRAFT_0574 - (p)ppGpp synthetase, RelA/SpoT family, at 578,324 to 580,441
_0574
B158DRAFT_0575: B158DRAFT_0575 - DNA-directed RNA polymerase subunit omega (EC 2.7.7.6), at 580,470 to 580,718
_0575
B158DRAFT_0576: B158DRAFT_0576 - guanylate kinase (EC 2.7.4.8), at 580,865 to 581,518
_0576
Position (kb) 578
579
580
581 Strain fitness (log2 ratio) -1
0
1 at 577.383 kb on - strand, within B158DRAFT_0572 at 577.383 kb on - strand, within B158DRAFT_0572 at 577.526 kb on + strand, within B158DRAFT_0572 at 577.560 kb on - strand, within B158DRAFT_0572 at 577.680 kb on - strand, within B158DRAFT_0572 at 577.694 kb on + strand, within B158DRAFT_0572 at 577.704 kb on + strand, within B158DRAFT_0572 at 577.704 kb on + strand, within B158DRAFT_0572 at 577.709 kb on + strand, within B158DRAFT_0572 at 577.709 kb on + strand, within B158DRAFT_0572 at 577.709 kb on + strand, within B158DRAFT_0572 at 577.709 kb on + strand, within B158DRAFT_0572 at 577.709 kb on + strand, within B158DRAFT_0572 at 577.712 kb on - strand, within B158DRAFT_0572 at 577.717 kb on - strand, within B158DRAFT_0572 at 577.717 kb on - strand, within B158DRAFT_0572 at 577.717 kb on - strand, within B158DRAFT_0572 at 577.717 kb on - strand, within B158DRAFT_0572 at 577.717 kb on - strand, within B158DRAFT_0572 at 577.766 kb on + strand, within B158DRAFT_0572 at 577.794 kb on + strand, within B158DRAFT_0572 at 577.794 kb on + strand, within B158DRAFT_0572 at 577.794 kb on + strand, within B158DRAFT_0572 at 577.794 kb on + strand, within B158DRAFT_0572 at 577.802 kb on - strand, within B158DRAFT_0572 at 577.802 kb on - strand, within B158DRAFT_0572 at 577.802 kb on - strand, within B158DRAFT_0572 at 577.802 kb on - strand, within B158DRAFT_0572 at 577.802 kb on - strand, within B158DRAFT_0572 at 577.809 kb on + strand, within B158DRAFT_0572 at 577.817 kb on - strand, within B158DRAFT_0572 at 577.835 kb on - strand at 577.837 kb on + strand at 577.837 kb on + strand at 577.866 kb on - strand at 577.890 kb on - strand at 577.900 kb on + strand at 577.900 kb on + strand at 577.900 kb on + strand at 577.900 kb on + strand at 577.900 kb on + strand at 577.900 kb on + strand at 577.900 kb on + strand at 577.908 kb on - strand at 577.908 kb on - strand at 577.908 kb on - strand at 577.908 kb on - strand at 577.908 kb on - strand at 577.908 kb on - strand at 577.908 kb on - strand at 577.948 kb on + strand, within B158DRAFT_0573 at 577.948 kb on + strand, within B158DRAFT_0573 at 577.956 kb on - strand, within B158DRAFT_0573 at 577.956 kb on - strand, within B158DRAFT_0573 at 577.956 kb on - strand, within B158DRAFT_0573 at 577.956 kb on - strand, within B158DRAFT_0573 at 577.995 kb on - strand, within B158DRAFT_0573 at 577.997 kb on + strand, within B158DRAFT_0573 at 578.086 kb on - strand, within B158DRAFT_0573 at 578.098 kb on + strand, within B158DRAFT_0573 at 578.098 kb on + strand, within B158DRAFT_0573 at 578.239 kb on + strand, within B158DRAFT_0573 at 578.400 kb on - strand at 578.572 kb on + strand, within B158DRAFT_0574 at 578.580 kb on - strand, within B158DRAFT_0574 at 580.727 kb on - strand at 580.768 kb on - strand at 580.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.0032 mM remove 577,383 - B158DRAFT_0572 0.26 -0.5 577,383 - B158DRAFT_0572 0.26 -0.3 577,526 + B158DRAFT_0572 0.46 +0.0 577,560 - B158DRAFT_0572 0.51 -0.2 577,680 - B158DRAFT_0572 0.68 -0.4 577,694 + B158DRAFT_0572 0.70 -0.3 577,704 + B158DRAFT_0572 0.72 -0.3 577,704 + B158DRAFT_0572 0.72 -0.5 577,709 + B158DRAFT_0572 0.73 +0.0 577,709 + B158DRAFT_0572 0.73 +0.0 577,709 + B158DRAFT_0572 0.73 -0.2 577,709 + B158DRAFT_0572 0.73 +0.4 577,709 + B158DRAFT_0572 0.73 +0.0 577,712 - B158DRAFT_0572 0.73 -0.2 577,717 - B158DRAFT_0572 0.74 -0.4 577,717 - B158DRAFT_0572 0.74 +0.2 577,717 - B158DRAFT_0572 0.74 -0.9 577,717 - B158DRAFT_0572 0.74 +0.1 577,717 - B158DRAFT_0572 0.74 -0.5 577,766 + B158DRAFT_0572 0.81 -0.3 577,794 + B158DRAFT_0572 0.85 -0.3 577,794 + B158DRAFT_0572 0.85 -0.0 577,794 + B158DRAFT_0572 0.85 +0.1 577,794 + B158DRAFT_0572 0.85 -0.6 577,802 - B158DRAFT_0572 0.86 -0.5 577,802 - B158DRAFT_0572 0.86 -0.0 577,802 - B158DRAFT_0572 0.86 -0.6 577,802 - B158DRAFT_0572 0.86 +0.2 577,802 - B158DRAFT_0572 0.86 -0.7 577,809 + B158DRAFT_0572 0.87 -0.3 577,817 - B158DRAFT_0572 0.88 +0.8 577,835 - +1.0 577,837 + -0.2 577,837 + -0.4 577,866 - -0.7 577,890 - +0.1 577,900 + +0.0 577,900 + -0.5 577,900 + -0.0 577,900 + +0.3 577,900 + -0.3 577,900 + -0.1 577,900 + -0.0 577,908 - -1.2 577,908 - -0.4 577,908 - +0.2 577,908 - -0.0 577,908 - -1.0 577,908 - +1.1 577,908 - +0.4 577,948 + B158DRAFT_0573 0.12 -0.8 577,948 + B158DRAFT_0573 0.12 -0.1 577,956 - B158DRAFT_0573 0.14 +0.3 577,956 - B158DRAFT_0573 0.14 -0.8 577,956 - B158DRAFT_0573 0.14 -0.6 577,956 - B158DRAFT_0573 0.14 -0.1 577,995 - B158DRAFT_0573 0.24 -0.4 577,997 + B158DRAFT_0573 0.25 -0.5 578,086 - B158DRAFT_0573 0.48 -0.5 578,098 + B158DRAFT_0573 0.51 -1.0 578,098 + B158DRAFT_0573 0.51 -0.4 578,239 + B158DRAFT_0573 0.87 -1.1 578,400 - +1.6 578,572 + B158DRAFT_0574 0.12 -0.1 578,580 - B158DRAFT_0574 0.12 +1.0 580,727 - -0.3 580,768 - -0.2 580,833 - -0.7
Or see this region's nucleotide sequence