Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4390

Experiment: Fusidic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.08 mg/ml
4,903,238	-		PfGW456L13_4388	0.25	+0.3
4,903,461	+		PfGW456L13_4388	0.62	+1.2
4,903,461	+		PfGW456L13_4388	0.62	+1.3
4,903,462	-		PfGW456L13_4388	0.63	+0.3
4,903,620	+		PfGW456L13_4388	0.89	+1.5
4,903,621	-		PfGW456L13_4388	0.89	-0.3
4,903,654	-				-0.3
4,903,810	-		PfGW456L13_4389	0.24	-0.1
4,903,857	+		PfGW456L13_4389	0.33	+0.3
4,903,857	+		PfGW456L13_4389	0.33	+1.0
4,903,857	+		PfGW456L13_4389	0.33	-1.4
4,903,857	+		PfGW456L13_4389	0.33	-0.5
4,903,857	+		PfGW456L13_4389	0.33	-0.4
4,903,857	+		PfGW456L13_4389	0.33	-1.2
4,903,857	+		PfGW456L13_4389	0.33	-2.0
4,903,858	-		PfGW456L13_4389	0.33	-0.1
4,903,858	-		PfGW456L13_4389	0.33	+1.3
4,903,858	-		PfGW456L13_4389	0.33	+1.4
4,903,858	-		PfGW456L13_4389	0.33	+0.9
4,903,950	+		PfGW456L13_4389	0.52	-1.8
4,903,970	+		PfGW456L13_4389	0.56	+1.1
4,903,971	-		PfGW456L13_4389	0.56	-0.4
4,903,992	+		PfGW456L13_4389	0.61	-0.1
4,903,993	-		PfGW456L13_4389	0.61	+1.1
4,904,178	+				-0.2
4,904,178	+				-0.1
4,904,178	+				+0.6
4,904,178	+				+1.8
4,904,198	+				+0.7
4,904,198	+				+0.3
4,904,199	-				-0.1
4,904,199	-				-0.9
4,904,199	-				-1.7
4,904,199	-				+0.6
4,904,199	-				+0.5
4,904,199	-				-0.1
4,904,241	-				-1.7
4,904,401	+				-0.5
4,904,401	+				+0.9
4,904,401	+				-1.0
4,904,401	+				+1.2
4,904,401	+				+0.3
4,904,401	+				+1.4
4,904,401	+				-2.1
4,904,402	-				+0.6
4,904,402	-				-1.8
4,904,402	-				+0.7
4,904,402	-				+0.2
4,904,402	-				-0.4
4,904,402	-				+0.3
4,904,402	-				-2.1
4,904,402	-				-0.1
4,904,453	+		PfGW456L13_4390	0.10	-0.7
4,904,453	+		PfGW456L13_4390	0.10	+0.1
4,904,453	+		PfGW456L13_4390	0.10	+0.9
4,904,453	+		PfGW456L13_4390	0.10	-1.2
4,904,454	-		PfGW456L13_4390	0.10	-0.2
4,904,454	-		PfGW456L13_4390	0.10	+2.5
4,904,454	-				-0.1
4,904,454	-		PfGW456L13_4390	0.10	+0.7
4,904,478	+		PfGW456L13_4390	0.11	+0.1
4,904,480	+		PfGW456L13_4390	0.11	-0.5
4,904,480	+		PfGW456L13_4390	0.11	+0.3
4,904,481	-		PfGW456L13_4390	0.11	+0.3
4,904,505	+		PfGW456L13_4390	0.12	-0.3
4,904,505	+		PfGW456L13_4390	0.12	+0.1
4,904,505	+		PfGW456L13_4390	0.12	+1.2
4,904,505	+		PfGW456L13_4390	0.12	+0.3
4,904,505	+		PfGW456L13_4390	0.12	+1.1
4,904,633	+		PfGW456L13_4390	0.17	-0.1
4,904,633	+		PfGW456L13_4390	0.17	+1.6
4,904,633	+		PfGW456L13_4390	0.17	-1.4
4,904,633	+		PfGW456L13_4390	0.17	-1.3
4,904,634	-		PfGW456L13_4390	0.17	+1.8
4,904,663	+		PfGW456L13_4390	0.19	-1.2
4,904,663	+		PfGW456L13_4390	0.19	-1.3
4,904,672	+		PfGW456L13_4390	0.19	+0.0
4,904,744	+		PfGW456L13_4390	0.22	-0.4
4,904,795	+		PfGW456L13_4390	0.24	+0.9
4,904,795	+		PfGW456L13_4390	0.24	-0.1
4,904,796	-		PfGW456L13_4390	0.24	+0.2
4,904,796	-		PfGW456L13_4390	0.24	-0.8
4,904,796	-		PfGW456L13_4390	0.24	+0.3
4,904,796	-		PfGW456L13_4390	0.24	-0.8
4,904,796	-		PfGW456L13_4390	0.24	+0.4
4,904,796	-		PfGW456L13_4390	0.24	-0.2
4,904,822	+		PfGW456L13_4390	0.25	-1.2
4,904,822	+		PfGW456L13_4390	0.25	-0.2
4,904,822	+		PfGW456L13_4390	0.25	-0.2
4,904,918	+		PfGW456L13_4390	0.29	-0.2
4,904,918	+				-1.4
4,904,918	+		PfGW456L13_4390	0.29	-0.5
4,904,918	+		PfGW456L13_4390	0.29	+1.2
4,904,919	-		PfGW456L13_4390	0.29	-1.7
4,904,919	-		PfGW456L13_4390	0.29	-0.2
4,904,936	+		PfGW456L13_4390	0.30	-0.4
4,904,936	+		PfGW456L13_4390	0.30	-0.3
4,904,937	-		PfGW456L13_4390	0.30	-1.1
4,904,937	-		PfGW456L13_4390	0.30	+0.0
4,904,937	-		PfGW456L13_4390	0.30	-0.0
4,904,937	-		PfGW456L13_4390	0.30	+0.0
4,904,937	-		PfGW456L13_4390	0.30	+0.9
4,904,985	+		PfGW456L13_4390	0.31	+0.5
4,904,986	-		PfGW456L13_4390	0.31	+0.2
4,905,090	-		PfGW456L13_4390	0.36	+0.0
4,905,161	+		PfGW456L13_4390	0.38	-0.1
4,905,161	+		PfGW456L13_4390	0.38	+0.3
4,905,162	-		PfGW456L13_4390	0.39	+0.6
4,905,162	-		PfGW456L13_4390	0.39	-0.8
4,905,162	-		PfGW456L13_4390	0.39	-0.5
4,905,266	+		PfGW456L13_4390	0.43	-0.3
4,905,267	-		PfGW456L13_4390	0.43	+0.2
4,905,267	-		PfGW456L13_4390	0.43	-0.6
4,905,267	-		PfGW456L13_4390	0.43	-0.0
4,905,267	-		PfGW456L13_4390	0.43	+0.2
4,905,530	+		PfGW456L13_4390	0.53	+0.1
4,905,530	+		PfGW456L13_4390	0.53	-0.1
4,905,530	+		PfGW456L13_4390	0.53	-1.8
4,905,531	-		PfGW456L13_4390	0.53	-0.1
4,905,617	+		PfGW456L13_4390	0.57	-0.2
4,905,617	+		PfGW456L13_4390	0.57	+0.5
4,905,617	+		PfGW456L13_4390	0.57	-1.1
4,905,618	-		PfGW456L13_4390	0.57	-0.2
4,905,686	+				+0.9
4,905,686	+		PfGW456L13_4390	0.59	-0.4
4,905,687	-		PfGW456L13_4390	0.59	-0.8
4,905,687	-		PfGW456L13_4390	0.59	-0.1
4,905,687	-		PfGW456L13_4390	0.59	+0.7
4,905,695	-		PfGW456L13_4390	0.60	-0.5
4,905,695	-				+0.3
4,905,695	-		PfGW456L13_4390	0.60	+0.8
4,905,695	-		PfGW456L13_4390	0.60	+0.1
4,905,887	+		PfGW456L13_4390	0.67	-0.5
4,905,887	+		PfGW456L13_4390	0.67	-1.4
4,905,887	+		PfGW456L13_4390	0.67	+1.0
4,905,888	-		PfGW456L13_4390	0.68	+0.7
4,905,888	-		PfGW456L13_4390	0.68	-0.9
4,905,888	-		PfGW456L13_4390	0.68	-1.8
4,905,888	-		PfGW456L13_4390	0.68	-0.3
4,905,888	-		PfGW456L13_4390	0.68	-1.3
4,905,888	-				+0.9
4,905,888	-		PfGW456L13_4390	0.68	-0.1
4,905,966	+		PfGW456L13_4390	0.71	+0.5
4,905,967	-		PfGW456L13_4390	0.71	+1.3
4,906,000	+		PfGW456L13_4390	0.72	-0.6
4,906,000	+		PfGW456L13_4390	0.72	-0.9
4,906,000	+		PfGW456L13_4390	0.72	-0.8
4,906,001	-		PfGW456L13_4390	0.72	+0.7
4,906,097	+		PfGW456L13_4390	0.76	+0.2
4,906,097	+		PfGW456L13_4390	0.76	+0.1
4,906,097	+		PfGW456L13_4390	0.76	-0.4
4,906,098	-		PfGW456L13_4390	0.76	-0.3
4,906,135	-		PfGW456L13_4390	0.77	+0.6
4,906,270	-		PfGW456L13_4390	0.83	+0.3
4,906,304	+		PfGW456L13_4390	0.84	-1.7
4,906,305	-		PfGW456L13_4390	0.84	-0.2
4,906,370	+		PfGW456L13_4390	0.87	-0.1
4,906,370	+		PfGW456L13_4390	0.87	+1.6
4,906,371	-		PfGW456L13_4390	0.87	-0.3
4,906,371	-		PfGW456L13_4390	0.87	+0.1
4,906,371	-		PfGW456L13_4390	0.87	+0.2
4,906,421	+		PfGW456L13_4390	0.89	-0.7
4,906,421	+		PfGW456L13_4390	0.89	-0.4
4,906,421	+		PfGW456L13_4390	0.89	-0.1
4,906,421	+		PfGW456L13_4390	0.89	-0.1
4,906,421	+		PfGW456L13_4390	0.89	+1.5
4,906,422	-		PfGW456L13_4390	0.89	+0.5
4,906,422	-		PfGW456L13_4390	0.89	-1.4
4,906,422	-		PfGW456L13_4390	0.89	+0.3
4,906,422	-		PfGW456L13_4390	0.89	-0.3
4,906,483	+				+0.2
4,906,483	+				-0.9
4,906,483	+				+0.4
4,906,483	+				+0.1
4,906,483	+				+0.8
4,906,623	+				-0.5
4,906,623	+				+0.6
4,906,623	+				-1.3
4,906,695	+				+0.9
4,906,695	+				+1.0
4,906,695	+				-0.8
4,906,695	+				-0.3
4,906,696	-				+1.8
4,906,696	-				-1.0
4,906,696	-				+0.8
4,906,696	-				+0.3
4,906,696	-				+1.5
4,906,696	-				-0.8
4,906,716	+				+1.0
4,906,716	+				+0.1
4,906,717	-				-0.3
4,906,717	-				-0.4
4,906,717	-				+0.0
4,906,736	-		PfGW456L13_4391	0.16	+0.8
4,906,923	+		PfGW456L13_4391	0.87	+0.7
4,906,923	+		PfGW456L13_4391	0.87	+0.2
4,906,923	+		PfGW456L13_4391	0.87	+0.2
4,906,923	+		PfGW456L13_4391	0.87	+0.4
4,906,923	+		PfGW456L13_4391	0.87	-0.9
4,906,923	+		PfGW456L13_4391	0.87	+0.6
4,906,923	+		PfGW456L13_4391	0.87	+0.7
4,906,924	-		PfGW456L13_4391	0.87	-1.9
4,906,924	-		PfGW456L13_4391	0.87	+1.5
4,906,924	-		PfGW456L13_4391	0.87	-0.7
4,906,924	-		PfGW456L13_4391	0.87	-1.1
4,906,924	-		PfGW456L13_4391	0.87	+0.3
4,906,924	-		PfGW456L13_4391	0.87	-1.2
4,906,924	-		PfGW456L13_4391	0.87	-0.7
4,906,924	-		PfGW456L13_4391	0.87	-2.2
4,906,986	+				-0.5
4,906,986	+				-0.7
4,906,986	+				+0.6
4,906,986	+				-0.1
4,906,986	+				+0.3
4,906,986	+				+0.3
4,906,986	+				+0.7
4,906,986	+				-1.4
4,906,987	-				+0.2
4,906,987	-				+0.0
4,906,987	-				+0.1
4,906,987	-				-0.1
4,906,987	-				-0.2
4,907,078	-		PfGW456L13_4392	0.49	-0.2
4,907,108	+		PfGW456L13_4392	0.67	+0.5
4,907,109	-		PfGW456L13_4392	0.67	-0.4
4,907,109	-		PfGW456L13_4392	0.67	+0.0
4,907,109	-		PfGW456L13_4392	0.67	-0.8
4,907,197	+				+1.3
4,907,197	+				+0.9
4,907,197	+				-0.1
4,907,197	+				-0.9
4,907,197	+				+0.1
4,907,198	-				-0.7
4,907,198	-				+0.1
4,907,214	-				-0.1
4,907,214	-				+0.2
4,907,235	+				+0.6
4,907,236	-				+0.1
4,907,248	-				-0.1
4,907,255	+				+0.0
4,907,259	+				-1.7
4,907,283	+				+0.2
4,907,284	-				-0.9
4,907,339	+				-0.7
4,907,339	+				+0.5
4,907,340	-				+1.1
4,907,346	+				-1.1
4,907,347	-				+1.0
4,907,521	-		PfGW456L13_4393	0.13	-0.3
4,907,536	+		PfGW456L13_4393	0.14	+1.6
4,907,537	-		PfGW456L13_4393	0.14	+0.6
4,907,537	-		PfGW456L13_4393	0.14	+0.3
4,907,625	+		PfGW456L13_4393	0.19	-0.5
4,907,626	-		PfGW456L13_4393	0.20	+0.3