Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3424

Experiment: LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF3423 and GFF3424 are separated by 456 nucleotidesGFF3424 and GFF3425 are separated by 321 nucleotides GFF3423 - FIG00643583: hypothetical protein, at 188,135 to 189,259 GFF3423 GFF3424 - FIG01045472: hypothetical protein, at 189,716 to 189,919 GFF3424 GFF3425 - Probable lipoprotein envF precursor, at 190,241 to 191,029 GFF3425 Position (kb) 189 190Strain fitness (log2 ratio) -1 0 1at 188.721 kb on - strand, within GFF3423at 188.760 kb on - strand, within GFF3423at 189.513 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
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188,721 - GFF3423 0.52 +0.5
188,760 - GFF3423 0.56 -0.5
189,513 + -0.7

Or see this region's nucleotide sequence