Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3374

Experiment: LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF3373 and GFF3374 are separated by 15 nucleotidesGFF3374 and GFF3375 are separated by 12 nucleotidesGFF3375 and GFF3376 are separated by 155 nucleotides GFF3373 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41), at 139,364 to 140,317 GFF3373 GFF3374 - Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39), at 140,333 to 141,262 GFF3374 GFF3375 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 141,275 to 142,009 GFF3375 GFF3376 - Acyl carrier protein, at 142,165 to 142,401 GFF3376 Position (kb) 140 141 142Strain fitness (log2 ratio) -1 0 1 2 3at 139.336 kb on + strandat 139.338 kb on + strandat 142.033 kb on + strandat 142.033 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
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139,336 + -0.2
139,338 + +1.7
142,033 + +3.0
142,033 + +2.9

Or see this region's nucleotide sequence