Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3638 and Echvi_3639 are separated by 5 nucleotides Echvi_3639 and Echvi_3640 are separated by 259 nucleotides
Echvi_3638: Echvi_3638 - 5-methyltetrahydrofolate--homocysteine methyltransferase, at 4,321,545 to 4,324,253
_3638
Echvi_3639: Echvi_3639 - Methionine synthase I (cobalamin-dependent), methyltransferase domain, at 4,324,259 to 4,325,302
_3639
Echvi_3640: Echvi_3640 - hypothetical protein, at 4,325,562 to 4,326,872
_3640
Position (kb)
4324
4325
4326 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4323.492 kb on + strand, within Echvi_3638 at 4323.671 kb on + strand, within Echvi_3638 at 4323.686 kb on + strand, within Echvi_3638 at 4323.725 kb on + strand, within Echvi_3638 at 4323.730 kb on + strand, within Echvi_3638 at 4323.730 kb on + strand, within Echvi_3638 at 4323.764 kb on - strand, within Echvi_3638 at 4323.998 kb on - strand at 4324.054 kb on - strand at 4324.219 kb on - strand at 4324.232 kb on + strand at 4324.272 kb on - strand at 4324.276 kb on + strand at 4324.276 kb on + strand at 4324.277 kb on - strand at 4324.277 kb on - strand at 4324.277 kb on - strand at 4324.277 kb on - strand at 4324.278 kb on + strand at 4324.278 kb on + strand at 4324.279 kb on - strand at 4324.279 kb on - strand at 4324.283 kb on + strand at 4324.330 kb on + strand at 4324.331 kb on - strand at 4324.432 kb on - strand, within Echvi_3639 at 4324.520 kb on + strand, within Echvi_3639 at 4324.521 kb on - strand, within Echvi_3639 at 4324.568 kb on + strand, within Echvi_3639 at 4324.815 kb on + strand, within Echvi_3639 at 4325.022 kb on + strand, within Echvi_3639 at 4325.045 kb on - strand, within Echvi_3639 at 4325.045 kb on - strand, within Echvi_3639 at 4325.066 kb on + strand, within Echvi_3639 at 4325.066 kb on + strand, within Echvi_3639 at 4325.091 kb on + strand, within Echvi_3639 at 4325.092 kb on - strand, within Echvi_3639 at 4325.095 kb on + strand, within Echvi_3639 at 4325.095 kb on + strand, within Echvi_3639 at 4325.128 kb on + strand, within Echvi_3639 at 4325.212 kb on + strand at 4325.212 kb on + strand at 4325.213 kb on - strand at 4325.213 kb on - strand at 4325.280 kb on - strand at 4325.280 kb on - strand at 4325.297 kb on - strand at 4325.314 kb on + strand at 4325.314 kb on + strand at 4325.315 kb on - strand at 4325.359 kb on - strand at 4325.364 kb on - strand at 4325.426 kb on - strand at 4325.435 kb on + strand at 4325.436 kb on - strand at 4325.489 kb on - strand at 4325.526 kb on + strand at 4325.530 kb on - strand at 4325.552 kb on + strand at 4325.608 kb on + strand at 4325.608 kb on + strand at 4325.609 kb on - strand at 4325.609 kb on - strand at 4325.632 kb on - strand at 4325.638 kb on + strand at 4325.693 kb on + strand, within Echvi_3640 at 4325.694 kb on - strand, within Echvi_3640 at 4325.694 kb on - strand, within Echvi_3640 at 4325.721 kb on - strand, within Echvi_3640 at 4325.724 kb on + strand, within Echvi_3640 at 4325.725 kb on - strand, within Echvi_3640 at 4325.776 kb on + strand, within Echvi_3640 at 4325.834 kb on - strand, within Echvi_3640 at 4325.834 kb on - strand, within Echvi_3640 at 4325.838 kb on + strand, within Echvi_3640 at 4325.839 kb on - strand, within Echvi_3640 at 4325.839 kb on - strand, within Echvi_3640 at 4325.843 kb on + strand, within Echvi_3640 at 4325.843 kb on + strand, within Echvi_3640 at 4325.843 kb on + strand, within Echvi_3640 at 4325.844 kb on - strand, within Echvi_3640 at 4325.844 kb on - strand, within Echvi_3640 at 4325.844 kb on - strand, within Echvi_3640 at 4325.920 kb on - strand, within Echvi_3640 at 4325.934 kb on - strand, within Echvi_3640 at 4325.972 kb on + strand, within Echvi_3640 at 4325.976 kb on + strand, within Echvi_3640 at 4325.976 kb on + strand, within Echvi_3640 at 4325.977 kb on - strand, within Echvi_3640 at 4325.977 kb on - strand, within Echvi_3640 at 4325.981 kb on + strand, within Echvi_3640 at 4325.983 kb on + strand, within Echvi_3640 at 4325.985 kb on + strand, within Echvi_3640 at 4325.985 kb on + strand, within Echvi_3640 at 4325.985 kb on + strand, within Echvi_3640 at 4325.991 kb on + strand, within Echvi_3640 at 4325.992 kb on - strand, within Echvi_3640 at 4326.067 kb on + strand, within Echvi_3640 at 4326.068 kb on - strand, within Echvi_3640 at 4326.068 kb on - strand, within Echvi_3640 at 4326.111 kb on - strand, within Echvi_3640 at 4326.124 kb on + strand, within Echvi_3640 at 4326.125 kb on - strand, within Echvi_3640 at 4326.130 kb on - strand, within Echvi_3640 at 4326.135 kb on + strand, within Echvi_3640 at 4326.135 kb on + strand, within Echvi_3640 at 4326.135 kb on + strand, within Echvi_3640 at 4326.136 kb on - strand, within Echvi_3640 at 4326.141 kb on + strand, within Echvi_3640 at 4326.142 kb on - strand, within Echvi_3640 at 4326.243 kb on + strand, within Echvi_3640 at 4326.300 kb on - strand, within Echvi_3640
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,323,492 + Echvi_3638 0.72 +0.1 4,323,671 + Echvi_3638 0.78 -1.5 4,323,686 + Echvi_3638 0.79 -0.9 4,323,725 + Echvi_3638 0.80 -1.9 4,323,730 + Echvi_3638 0.81 -0.9 4,323,730 + Echvi_3638 0.81 -1.3 4,323,764 - Echvi_3638 0.82 -2.0 4,323,998 - -1.3 4,324,054 - -0.6 4,324,219 - -2.5 4,324,232 + -3.2 4,324,272 - +0.3 4,324,276 + -1.8 4,324,276 + -1.8 4,324,277 - -0.0 4,324,277 - -1.3 4,324,277 - -0.6 4,324,277 - +0.9 4,324,278 + -2.2 4,324,278 + -3.9 4,324,279 - +0.4 4,324,279 - -1.6 4,324,283 + -1.3 4,324,330 + -0.9 4,324,331 - -3.7 4,324,432 - Echvi_3639 0.17 -0.9 4,324,520 + Echvi_3639 0.25 -0.9 4,324,521 - Echvi_3639 0.25 -1.6 4,324,568 + Echvi_3639 0.30 -0.6 4,324,815 + Echvi_3639 0.53 -1.3 4,325,022 + Echvi_3639 0.73 -0.6 4,325,045 - Echvi_3639 0.75 +0.1 4,325,045 - Echvi_3639 0.75 -2.0 4,325,066 + Echvi_3639 0.77 -0.6 4,325,066 + Echvi_3639 0.77 -3.6 4,325,091 + Echvi_3639 0.80 -1.6 4,325,092 - Echvi_3639 0.80 -0.6 4,325,095 + Echvi_3639 0.80 +0.1 4,325,095 + Echvi_3639 0.80 -2.8 4,325,128 + Echvi_3639 0.83 -2.2 4,325,212 + -1.3 4,325,212 + -1.3 4,325,213 - -2.1 4,325,213 - +0.1 4,325,280 - -1.1 4,325,280 - -0.6 4,325,297 - -0.9 4,325,314 + -2.3 4,325,314 + -3.7 4,325,315 - -0.9 4,325,359 - +0.4 4,325,364 - -0.5 4,325,426 - +0.2 4,325,435 + -3.2 4,325,436 - -0.3 4,325,489 - -0.9 4,325,526 + +0.3 4,325,530 - -1.1 4,325,552 + +0.2 4,325,608 + +1.7 4,325,608 + -0.2 4,325,609 - -0.2 4,325,609 - +0.8 4,325,632 - -0.9 4,325,638 + +0.6 4,325,693 + Echvi_3640 0.10 -1.1 4,325,694 - Echvi_3640 0.10 -0.0 4,325,694 - Echvi_3640 0.10 +0.4 4,325,721 - Echvi_3640 0.12 +0.7 4,325,724 + Echvi_3640 0.12 -2.3 4,325,725 - Echvi_3640 0.12 -0.1 4,325,776 + Echvi_3640 0.16 -0.9 4,325,834 - Echvi_3640 0.21 -1.3 4,325,834 - Echvi_3640 0.21 +1.3 4,325,838 + Echvi_3640 0.21 +0.5 4,325,839 - Echvi_3640 0.21 -0.3 4,325,839 - Echvi_3640 0.21 -0.9 4,325,843 + Echvi_3640 0.21 -0.6 4,325,843 + Echvi_3640 0.21 -0.3 4,325,843 + Echvi_3640 0.21 -1.1 4,325,844 - Echvi_3640 0.22 -0.4 4,325,844 - Echvi_3640 0.22 -1.5 4,325,844 - Echvi_3640 0.22 +0.1 4,325,920 - Echvi_3640 0.27 +0.7 4,325,934 - Echvi_3640 0.28 +0.2 4,325,972 + Echvi_3640 0.31 +0.5 4,325,976 + Echvi_3640 0.32 -0.2 4,325,976 + Echvi_3640 0.32 -0.8 4,325,977 - Echvi_3640 0.32 +0.7 4,325,977 - Echvi_3640 0.32 -2.8 4,325,981 + Echvi_3640 0.32 -1.5 4,325,983 + Echvi_3640 0.32 -1.1 4,325,985 + Echvi_3640 0.32 +0.4 4,325,985 + Echvi_3640 0.32 -0.9 4,325,985 + Echvi_3640 0.32 -0.2 4,325,991 + Echvi_3640 0.33 +0.3 4,325,992 - Echvi_3640 0.33 +1.1 4,326,067 + Echvi_3640 0.39 +0.7 4,326,068 - Echvi_3640 0.39 +0.9 4,326,068 - Echvi_3640 0.39 +0.2 4,326,111 - Echvi_3640 0.42 -0.4 4,326,124 + Echvi_3640 0.43 +0.1 4,326,125 - Echvi_3640 0.43 -0.8 4,326,130 - Echvi_3640 0.43 +0.2 4,326,135 + Echvi_3640 0.44 +0.4 4,326,135 + Echvi_3640 0.44 -1.7 4,326,135 + Echvi_3640 0.44 +0.3 4,326,136 - Echvi_3640 0.44 -0.5 4,326,141 + Echvi_3640 0.44 -0.3 4,326,142 - Echvi_3640 0.44 -1.1 4,326,243 + Echvi_3640 0.52 -1.8 4,326,300 - Echvi_3640 0.56 +0.4
Or see this region's nucleotide sequence