Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2582 and Echvi_2583 are separated by 376 nucleotides Echvi_2583 and Echvi_2584 are separated by 134 nucleotides Echvi_2584 and Echvi_2585 are separated by 290 nucleotides
Echvi_2582: Echvi_2582 - hypothetical protein, at 3,061,278 to 3,061,796
_2582
Echvi_2583: Echvi_2583 - selT/selW/selH selenoprotein domain, at 3,062,173 to 3,062,454
_2583
Echvi_2584: Echvi_2584 - RNA polymerase sigma factor, sigma-70 family, at 3,062,589 to 3,063,131
_2584
Echvi_2585: Echvi_2585 - Fe2+-dicitrate sensor, membrane component, at 3,063,422 to 3,064,450
_2585
Position (kb)
3062
3063
3064 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3061.676 kb on + strand, within Echvi_2582 at 3061.677 kb on - strand, within Echvi_2582 at 3061.677 kb on - strand, within Echvi_2582 at 3061.677 kb on - strand, within Echvi_2582 at 3061.677 kb on - strand, within Echvi_2582 at 3061.678 kb on + strand, within Echvi_2582 at 3061.679 kb on - strand, within Echvi_2582 at 3061.761 kb on - strand at 3061.761 kb on - strand at 3061.761 kb on - strand at 3061.776 kb on + strand at 3061.815 kb on + strand at 3061.824 kb on + strand at 3061.826 kb on + strand at 3061.827 kb on - strand at 3061.827 kb on - strand at 3061.848 kb on + strand at 3061.848 kb on + strand at 3061.972 kb on - strand at 3061.973 kb on + strand at 3061.974 kb on - strand at 3061.974 kb on - strand at 3061.974 kb on - strand at 3061.974 kb on - strand at 3061.974 kb on - strand at 3061.978 kb on + strand at 3061.978 kb on + strand at 3061.979 kb on - strand at 3061.979 kb on - strand at 3061.990 kb on + strand at 3061.995 kb on + strand at 3061.995 kb on + strand at 3061.995 kb on + strand at 3061.995 kb on + strand at 3061.995 kb on + strand at 3061.995 kb on + strand at 3061.996 kb on - strand at 3061.996 kb on - strand at 3061.996 kb on - strand at 3061.999 kb on + strand at 3061.999 kb on + strand at 3061.999 kb on + strand at 3062.000 kb on - strand at 3062.000 kb on - strand at 3062.000 kb on - strand at 3062.006 kb on - strand at 3062.029 kb on + strand at 3062.029 kb on + strand at 3062.029 kb on + strand at 3062.036 kb on + strand at 3062.036 kb on + strand at 3062.057 kb on + strand at 3062.057 kb on + strand at 3062.058 kb on - strand at 3062.058 kb on - strand at 3062.058 kb on - strand at 3062.058 kb on - strand at 3062.102 kb on + strand at 3062.103 kb on - strand at 3062.115 kb on + strand at 3062.115 kb on + strand at 3062.116 kb on - strand at 3062.139 kb on - strand at 3062.159 kb on + strand at 3062.197 kb on + strand at 3062.197 kb on + strand at 3062.198 kb on - strand at 3062.198 kb on - strand at 3062.198 kb on - strand at 3062.203 kb on - strand, within Echvi_2583 at 3062.288 kb on + strand, within Echvi_2583 at 3062.288 kb on + strand, within Echvi_2583 at 3062.340 kb on - strand, within Echvi_2583 at 3062.478 kb on - strand at 3062.505 kb on + strand at 3062.508 kb on + strand at 3062.563 kb on - strand at 3062.568 kb on + strand at 3062.628 kb on - strand at 3062.664 kb on + strand, within Echvi_2584 at 3062.664 kb on + strand, within Echvi_2584 at 3062.665 kb on - strand, within Echvi_2584 at 3062.689 kb on - strand, within Echvi_2584 at 3062.689 kb on - strand, within Echvi_2584 at 3062.689 kb on - strand, within Echvi_2584 at 3062.689 kb on - strand, within Echvi_2584 at 3062.756 kb on - strand, within Echvi_2584 at 3062.808 kb on + strand, within Echvi_2584 at 3062.829 kb on + strand, within Echvi_2584 at 3062.829 kb on + strand, within Echvi_2584 at 3062.830 kb on - strand, within Echvi_2584 at 3062.830 kb on - strand, within Echvi_2584 at 3062.830 kb on - strand, within Echvi_2584 at 3062.876 kb on + strand, within Echvi_2584 at 3062.876 kb on + strand, within Echvi_2584 at 3062.876 kb on + strand, within Echvi_2584 at 3062.876 kb on + strand, within Echvi_2584 at 3062.876 kb on + strand, within Echvi_2584 at 3062.877 kb on - strand, within Echvi_2584 at 3062.877 kb on - strand, within Echvi_2584 at 3062.877 kb on - strand, within Echvi_2584 at 3062.882 kb on + strand, within Echvi_2584 at 3062.984 kb on + strand, within Echvi_2584 at 3063.110 kb on - strand at 3063.132 kb on + strand at 3063.133 kb on - strand at 3063.133 kb on - strand at 3063.186 kb on + strand at 3063.187 kb on - strand at 3063.193 kb on + strand at 3063.194 kb on - strand at 3063.194 kb on - strand at 3063.214 kb on + strand at 3063.214 kb on + strand at 3063.214 kb on + strand at 3063.214 kb on + strand at 3063.215 kb on - strand at 3063.219 kb on + strand at 3063.255 kb on + strand at 3063.323 kb on + strand at 3063.323 kb on + strand at 3063.324 kb on - strand at 3063.324 kb on - strand at 3063.324 kb on - strand at 3063.324 kb on - strand at 3063.324 kb on - strand at 3063.324 kb on - strand at 3063.336 kb on - strand at 3063.418 kb on - strand at 3063.420 kb on + strand at 3063.545 kb on + strand, within Echvi_2585 at 3063.546 kb on - strand, within Echvi_2585 at 3063.546 kb on - strand, within Echvi_2585 at 3063.546 kb on - strand, within Echvi_2585 at 3063.546 kb on - strand, within Echvi_2585 at 3063.610 kb on + strand, within Echvi_2585 at 3063.611 kb on - strand, within Echvi_2585 at 3063.652 kb on + strand, within Echvi_2585 at 3063.653 kb on - strand, within Echvi_2585 at 3063.696 kb on - strand, within Echvi_2585 at 3063.697 kb on + strand, within Echvi_2585 at 3063.698 kb on - strand, within Echvi_2585 at 3063.708 kb on + strand, within Echvi_2585 at 3063.709 kb on - strand, within Echvi_2585 at 3063.748 kb on + strand, within Echvi_2585 at 3063.765 kb on - strand, within Echvi_2585 at 3063.765 kb on - strand, within Echvi_2585 at 3063.765 kb on - strand, within Echvi_2585 at 3063.765 kb on - strand, within Echvi_2585 at 3063.765 kb on - strand, within Echvi_2585 at 3063.769 kb on - strand, within Echvi_2585 at 3063.769 kb on - strand, within Echvi_2585 at 3063.769 kb on - strand, within Echvi_2585 at 3063.777 kb on - strand, within Echvi_2585 at 3063.822 kb on - strand, within Echvi_2585 at 3063.822 kb on - strand, within Echvi_2585 at 3063.906 kb on - strand, within Echvi_2585 at 3064.040 kb on - strand, within Echvi_2585
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,061,676 + Echvi_2582 0.77 +0.0 3,061,677 - Echvi_2582 0.77 +1.0 3,061,677 - Echvi_2582 0.77 -0.5 3,061,677 - Echvi_2582 0.77 +0.4 3,061,677 - Echvi_2582 0.77 +0.4 3,061,678 + Echvi_2582 0.77 +0.2 3,061,679 - Echvi_2582 0.77 +1.2 3,061,761 - -0.6 3,061,761 - +0.8 3,061,761 - +1.2 3,061,776 + -0.2 3,061,815 + -0.1 3,061,824 + +1.1 3,061,826 + -0.9 3,061,827 - +1.1 3,061,827 - +1.0 3,061,848 + -0.2 3,061,848 + +1.1 3,061,972 - -0.6 3,061,973 + +0.4 3,061,974 - +0.2 3,061,974 - +0.4 3,061,974 - +0.4 3,061,974 - -1.7 3,061,974 - +0.4 3,061,978 + +0.4 3,061,978 + -0.3 3,061,979 - -1.1 3,061,979 - +0.1 3,061,990 + -1.9 3,061,995 + -0.2 3,061,995 + +0.9 3,061,995 + +0.8 3,061,995 + +1.6 3,061,995 + -0.4 3,061,995 + -1.2 3,061,996 - -2.0 3,061,996 - +0.3 3,061,996 - +0.2 3,061,999 + -0.6 3,061,999 + -1.6 3,061,999 + -1.0 3,062,000 - +1.4 3,062,000 - +0.4 3,062,000 - -1.1 3,062,006 - -0.3 3,062,029 + +0.6 3,062,029 + +0.2 3,062,029 + -0.9 3,062,036 + +1.1 3,062,036 + +0.8 3,062,057 + -0.5 3,062,057 + -0.2 3,062,058 - -0.2 3,062,058 - -0.7 3,062,058 - -1.3 3,062,058 - +1.0 3,062,102 + +0.5 3,062,103 - -0.3 3,062,115 + +0.8 3,062,115 + +0.2 3,062,116 - -1.0 3,062,139 - -0.2 3,062,159 + -1.3 3,062,197 + -0.4 3,062,197 + -0.2 3,062,198 - -1.0 3,062,198 - +0.3 3,062,198 - -1.8 3,062,203 - Echvi_2583 0.11 +1.6 3,062,288 + Echvi_2583 0.41 -0.1 3,062,288 + Echvi_2583 0.41 -0.4 3,062,340 - Echvi_2583 0.59 -4.7 3,062,478 - -1.8 3,062,505 + +1.8 3,062,508 + -0.2 3,062,563 - -0.5 3,062,568 + +0.7 3,062,628 - +0.5 3,062,664 + Echvi_2584 0.14 +0.2 3,062,664 + Echvi_2584 0.14 -0.5 3,062,665 - Echvi_2584 0.14 -0.5 3,062,689 - Echvi_2584 0.18 -1.1 3,062,689 - Echvi_2584 0.18 +0.4 3,062,689 - Echvi_2584 0.18 -0.9 3,062,689 - Echvi_2584 0.18 -1.2 3,062,756 - Echvi_2584 0.31 +0.2 3,062,808 + Echvi_2584 0.40 +0.8 3,062,829 + Echvi_2584 0.44 +0.5 3,062,829 + Echvi_2584 0.44 -0.8 3,062,830 - Echvi_2584 0.44 +1.5 3,062,830 - Echvi_2584 0.44 +1.4 3,062,830 - Echvi_2584 0.44 +0.8 3,062,876 + Echvi_2584 0.53 +0.1 3,062,876 + Echvi_2584 0.53 +1.0 3,062,876 + Echvi_2584 0.53 +0.1 3,062,876 + Echvi_2584 0.53 -0.2 3,062,876 + Echvi_2584 0.53 -0.2 3,062,877 - Echvi_2584 0.53 +0.9 3,062,877 - Echvi_2584 0.53 -0.0 3,062,877 - Echvi_2584 0.53 +0.6 3,062,882 + Echvi_2584 0.54 +1.0 3,062,984 + Echvi_2584 0.73 -0.2 3,063,110 - +0.8 3,063,132 + +1.2 3,063,133 - +0.5 3,063,133 - +1.1 3,063,186 + +0.2 3,063,187 - -0.7 3,063,193 + +0.2 3,063,194 - +1.2 3,063,194 - +0.1 3,063,214 + -2.8 3,063,214 + -2.2 3,063,214 + -0.7 3,063,214 + -0.5 3,063,215 - -0.5 3,063,219 + +0.4 3,063,255 + -1.0 3,063,323 + -0.8 3,063,323 + -1.0 3,063,324 - +0.2 3,063,324 - -0.6 3,063,324 - -1.4 3,063,324 - +0.1 3,063,324 - -0.6 3,063,324 - -1.8 3,063,336 - -0.2 3,063,418 - -0.3 3,063,420 + -0.1 3,063,545 + Echvi_2585 0.12 +0.2 3,063,546 - Echvi_2585 0.12 +1.0 3,063,546 - Echvi_2585 0.12 -0.2 3,063,546 - Echvi_2585 0.12 +0.4 3,063,546 - Echvi_2585 0.12 -0.4 3,063,610 + Echvi_2585 0.18 -0.7 3,063,611 - Echvi_2585 0.18 -0.4 3,063,652 + Echvi_2585 0.22 +0.6 3,063,653 - Echvi_2585 0.22 -0.1 3,063,696 - Echvi_2585 0.27 -0.7 3,063,697 + Echvi_2585 0.27 +1.0 3,063,698 - Echvi_2585 0.27 -0.6 3,063,708 + Echvi_2585 0.28 +1.6 3,063,709 - Echvi_2585 0.28 +0.1 3,063,748 + Echvi_2585 0.32 +0.2 3,063,765 - Echvi_2585 0.33 -0.3 3,063,765 - Echvi_2585 0.33 -0.1 3,063,765 - Echvi_2585 0.33 -0.2 3,063,765 - Echvi_2585 0.33 +0.7 3,063,765 - Echvi_2585 0.33 +0.3 3,063,769 - Echvi_2585 0.34 -0.2 3,063,769 - Echvi_2585 0.34 -0.7 3,063,769 - Echvi_2585 0.34 -0.4 3,063,777 - Echvi_2585 0.34 -0.8 3,063,822 - Echvi_2585 0.39 -1.4 3,063,822 - Echvi_2585 0.39 +1.1 3,063,906 - Echvi_2585 0.47 -0.2 3,064,040 - Echvi_2585 0.60 +1.1
Or see this region's nucleotide sequence