Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0529 and Echvi_0530 are separated by 45 nucleotides Echvi_0530 and Echvi_0531 are separated by 8 nucleotides Echvi_0531 and Echvi_0532 are separated by 45 nucleotides Echvi_0532 and Echvi_0533 are separated by 48 nucleotides Echvi_0533 and Echvi_0534 are separated by 47 nucleotides Echvi_0534 and Echvi_0535 are separated by 142 nucleotides Echvi_0535 and Echvi_0536 are separated by 234 nucleotides Echvi_0536 and Echvi_0537 are separated by 77 nucleotides
Echvi_0529: Echvi_0529 - Predicted endonuclease containing a URI domain, at 595,852 to 596,106
_0529
Echvi_0530: Echvi_0530 - tRNA, at 596,152 to 596,228
_0530
Echvi_0531: Echvi_0531 - Predicted endonuclease containing a URI domain, at 596,237 to 596,491
_0531
Echvi_0532: Echvi_0532 - tRNA, at 596,537 to 596,611
_0532
Echvi_0533: Echvi_0533 - tRNA, at 596,660 to 596,737
_0533
Echvi_0534: Echvi_0534 - tRNA, at 596,785 to 596,864
_0534
Echvi_0535: Echvi_0535 - NAD-dependent aldehyde dehydrogenases, at 597,007 to 598,551
_0535
Echvi_0536: Echvi_0536 - hypothetical protein, at 598,786 to 599,355
_0536
Echvi_0537: Echvi_0537 - hypothetical protein, at 599,433 to 600,113
_0537
Position (kb) 597
598
599 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 596.521 kb on + strand at 596.955 kb on + strand at 596.966 kb on + strand at 596.990 kb on + strand at 597.012 kb on + strand at 597.021 kb on + strand at 597.048 kb on + strand at 597.048 kb on + strand at 597.049 kb on - strand at 597.051 kb on + strand at 597.053 kb on + strand at 597.053 kb on + strand at 597.053 kb on + strand at 597.053 kb on + strand at 597.054 kb on - strand at 597.081 kb on + strand at 597.081 kb on + strand at 597.083 kb on + strand at 597.083 kb on + strand at 597.083 kb on + strand at 597.083 kb on + strand at 597.084 kb on - strand at 597.171 kb on + strand, within Echvi_0535 at 597.180 kb on + strand, within Echvi_0535 at 597.180 kb on + strand, within Echvi_0535 at 597.282 kb on + strand, within Echvi_0535 at 597.283 kb on - strand, within Echvi_0535 at 597.316 kb on - strand, within Echvi_0535 at 597.317 kb on + strand, within Echvi_0535 at 597.318 kb on - strand, within Echvi_0535 at 597.325 kb on - strand, within Echvi_0535 at 597.329 kb on + strand, within Echvi_0535 at 597.329 kb on + strand, within Echvi_0535 at 597.330 kb on - strand, within Echvi_0535 at 597.330 kb on - strand, within Echvi_0535 at 597.330 kb on - strand, within Echvi_0535 at 597.330 kb on - strand, within Echvi_0535 at 597.388 kb on + strand, within Echvi_0535 at 597.388 kb on + strand, within Echvi_0535 at 597.388 kb on + strand, within Echvi_0535 at 597.404 kb on + strand, within Echvi_0535 at 597.404 kb on + strand, within Echvi_0535 at 597.405 kb on - strand, within Echvi_0535 at 597.405 kb on - strand, within Echvi_0535 at 597.419 kb on + strand, within Echvi_0535 at 597.419 kb on + strand, within Echvi_0535 at 597.420 kb on - strand, within Echvi_0535 at 597.420 kb on - strand, within Echvi_0535 at 597.420 kb on - strand, within Echvi_0535 at 597.452 kb on - strand, within Echvi_0535 at 597.498 kb on - strand, within Echvi_0535 at 597.520 kb on + strand, within Echvi_0535 at 597.648 kb on + strand, within Echvi_0535 at 597.648 kb on + strand, within Echvi_0535 at 597.649 kb on - strand, within Echvi_0535 at 597.649 kb on - strand, within Echvi_0535 at 597.702 kb on + strand, within Echvi_0535 at 597.702 kb on + strand, within Echvi_0535 at 597.702 kb on + strand, within Echvi_0535 at 597.703 kb on - strand, within Echvi_0535 at 597.703 kb on - strand, within Echvi_0535 at 597.703 kb on - strand, within Echvi_0535 at 597.730 kb on - strand, within Echvi_0535 at 597.732 kb on + strand, within Echvi_0535 at 597.732 kb on + strand, within Echvi_0535 at 597.732 kb on + strand, within Echvi_0535 at 597.733 kb on - strand, within Echvi_0535 at 597.733 kb on - strand, within Echvi_0535 at 597.733 kb on - strand, within Echvi_0535 at 597.769 kb on + strand, within Echvi_0535 at 597.843 kb on + strand, within Echvi_0535 at 597.921 kb on + strand, within Echvi_0535 at 597.922 kb on - strand, within Echvi_0535 at 597.925 kb on - strand, within Echvi_0535 at 597.925 kb on - strand, within Echvi_0535 at 597.943 kb on + strand, within Echvi_0535 at 598.075 kb on + strand, within Echvi_0535 at 598.075 kb on + strand, within Echvi_0535 at 598.103 kb on + strand, within Echvi_0535 at 598.103 kb on + strand, within Echvi_0535 at 598.103 kb on + strand, within Echvi_0535 at 598.104 kb on - strand, within Echvi_0535 at 598.104 kb on - strand, within Echvi_0535 at 598.107 kb on + strand, within Echvi_0535 at 598.107 kb on + strand, within Echvi_0535 at 598.107 kb on + strand, within Echvi_0535 at 598.107 kb on + strand, within Echvi_0535 at 598.108 kb on - strand, within Echvi_0535 at 598.108 kb on - strand, within Echvi_0535 at 598.134 kb on + strand, within Echvi_0535 at 598.137 kb on + strand, within Echvi_0535 at 598.137 kb on + strand, within Echvi_0535 at 598.138 kb on - strand, within Echvi_0535 at 598.138 kb on - strand, within Echvi_0535 at 598.138 kb on - strand, within Echvi_0535 at 598.138 kb on - strand, within Echvi_0535 at 598.183 kb on - strand, within Echvi_0535 at 598.183 kb on - strand, within Echvi_0535 at 598.238 kb on + strand, within Echvi_0535 at 598.247 kb on - strand, within Echvi_0535 at 598.247 kb on - strand, within Echvi_0535 at 598.300 kb on + strand, within Echvi_0535 at 598.300 kb on + strand, within Echvi_0535 at 598.434 kb on - strand at 598.441 kb on - strand at 598.459 kb on - strand at 598.462 kb on + strand at 598.463 kb on - strand at 598.463 kb on - strand at 598.464 kb on + strand at 598.491 kb on + strand at 598.495 kb on + strand at 598.496 kb on - strand at 598.570 kb on - strand at 598.587 kb on - strand at 598.619 kb on - strand at 598.622 kb on + strand at 598.623 kb on - strand at 598.639 kb on + strand at 598.653 kb on + strand at 598.653 kb on + strand at 598.653 kb on + strand at 598.657 kb on + strand at 598.657 kb on + strand at 598.658 kb on - strand at 598.751 kb on + strand at 598.751 kb on + strand at 598.752 kb on - strand at 598.752 kb on - strand at 598.753 kb on + strand at 598.754 kb on - strand at 598.754 kb on - strand at 598.754 kb on - strand at 598.754 kb on - strand at 598.758 kb on + strand at 598.758 kb on + strand at 598.759 kb on - strand at 598.761 kb on - strand at 598.764 kb on + strand at 598.765 kb on - strand at 598.765 kb on - strand at 598.765 kb on - strand at 598.796 kb on - strand at 598.823 kb on + strand at 598.827 kb on + strand at 598.827 kb on + strand at 598.828 kb on - strand at 598.828 kb on - strand at 598.828 kb on - strand at 598.828 kb on - strand at 598.884 kb on + strand, within Echvi_0536 at 598.884 kb on + strand, within Echvi_0536 at 598.885 kb on - strand, within Echvi_0536 at 598.972 kb on - strand, within Echvi_0536 at 599.017 kb on - strand, within Echvi_0536 at 599.151 kb on + strand, within Echvi_0536 at 599.151 kb on + strand, within Echvi_0536 at 599.160 kb on + strand, within Echvi_0536 at 599.160 kb on + strand, within Echvi_0536 at 599.161 kb on - strand, within Echvi_0536 at 599.195 kb on + strand, within Echvi_0536 at 599.196 kb on - strand, within Echvi_0536 at 599.202 kb on + strand, within Echvi_0536 at 599.202 kb on + strand, within Echvi_0536 at 599.202 kb on + strand, within Echvi_0536 at 599.206 kb on + strand, within Echvi_0536 at 599.312 kb on + strand at 599.442 kb on + strand at 599.442 kb on + strand at 599.443 kb on - strand at 599.450 kb on - strand at 599.452 kb on + strand at 599.452 kb on + strand at 599.452 kb on + strand at 599.452 kb on + strand at 599.453 kb on - strand at 599.453 kb on - strand at 599.526 kb on + strand, within Echvi_0537 at 599.548 kb on - strand, within Echvi_0537 at 599.548 kb on - strand, within Echvi_0537 at 599.549 kb on + strand, within Echvi_0537 at 599.549 kb on + strand, within Echvi_0537 at 599.550 kb on - strand, within Echvi_0537
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 596,521 + +0.4 596,955 + +0.7 596,966 + +0.1 596,990 + +0.7 597,012 + +0.1 597,021 + +1.1 597,048 + +0.6 597,048 + -0.4 597,049 - -0.3 597,051 + -0.7 597,053 + -0.5 597,053 + -0.3 597,053 + -0.1 597,053 + -1.1 597,054 - +0.0 597,081 + -0.6 597,081 + +2.8 597,083 + +2.0 597,083 + +0.2 597,083 + -0.3 597,083 + -0.8 597,084 - -0.8 597,171 + Echvi_0535 0.11 -0.9 597,180 + Echvi_0535 0.11 -1.4 597,180 + Echvi_0535 0.11 +2.2 597,282 + Echvi_0535 0.18 -0.8 597,283 - Echvi_0535 0.18 -0.4 597,316 - Echvi_0535 0.20 -1.6 597,317 + Echvi_0535 0.20 -0.3 597,318 - Echvi_0535 0.20 -0.8 597,325 - Echvi_0535 0.21 -1.4 597,329 + Echvi_0535 0.21 +0.7 597,329 + Echvi_0535 0.21 -0.8 597,330 - Echvi_0535 0.21 +1.2 597,330 - Echvi_0535 0.21 +0.8 597,330 - Echvi_0535 0.21 +0.1 597,330 - Echvi_0535 0.21 +1.4 597,388 + Echvi_0535 0.25 -1.2 597,388 + Echvi_0535 0.25 +0.6 597,388 + Echvi_0535 0.25 +0.3 597,404 + Echvi_0535 0.26 -0.0 597,404 + Echvi_0535 0.26 -1.8 597,405 - Echvi_0535 0.26 +1.0 597,405 - Echvi_0535 0.26 -0.8 597,419 + Echvi_0535 0.27 -0.4 597,419 + Echvi_0535 0.27 +1.4 597,420 - Echvi_0535 0.27 +0.8 597,420 - Echvi_0535 0.27 -0.2 597,420 - Echvi_0535 0.27 +0.5 597,452 - Echvi_0535 0.29 +1.0 597,498 - Echvi_0535 0.32 +3.3 597,520 + Echvi_0535 0.33 +0.2 597,648 + Echvi_0535 0.41 -0.3 597,648 + Echvi_0535 0.41 -0.1 597,649 - Echvi_0535 0.42 +1.0 597,649 - Echvi_0535 0.42 +1.0 597,702 + Echvi_0535 0.45 -0.8 597,702 + Echvi_0535 0.45 +1.3 597,702 + Echvi_0535 0.45 +0.6 597,703 - Echvi_0535 0.45 +1.3 597,703 - Echvi_0535 0.45 -0.6 597,703 - Echvi_0535 0.45 -1.0 597,730 - Echvi_0535 0.47 -0.1 597,732 + Echvi_0535 0.47 +0.5 597,732 + Echvi_0535 0.47 +0.1 597,732 + Echvi_0535 0.47 +1.2 597,733 - Echvi_0535 0.47 +0.3 597,733 - Echvi_0535 0.47 -0.1 597,733 - Echvi_0535 0.47 +0.5 597,769 + Echvi_0535 0.49 -1.3 597,843 + Echvi_0535 0.54 +0.6 597,921 + Echvi_0535 0.59 -1.0 597,922 - Echvi_0535 0.59 -0.1 597,925 - Echvi_0535 0.59 -0.5 597,925 - Echvi_0535 0.59 +0.7 597,943 + Echvi_0535 0.61 +0.3 598,075 + Echvi_0535 0.69 -0.6 598,075 + Echvi_0535 0.69 -0.6 598,103 + Echvi_0535 0.71 -0.4 598,103 + Echvi_0535 0.71 +0.7 598,103 + Echvi_0535 0.71 -1.2 598,104 - Echvi_0535 0.71 -0.9 598,104 - Echvi_0535 0.71 +0.2 598,107 + Echvi_0535 0.71 +0.9 598,107 + Echvi_0535 0.71 +0.3 598,107 + Echvi_0535 0.71 +1.0 598,107 + Echvi_0535 0.71 -1.2 598,108 - Echvi_0535 0.71 +0.3 598,108 - Echvi_0535 0.71 +2.0 598,134 + Echvi_0535 0.73 +0.9 598,137 + Echvi_0535 0.73 +0.1 598,137 + Echvi_0535 0.73 +0.2 598,138 - Echvi_0535 0.73 -0.4 598,138 - Echvi_0535 0.73 -0.7 598,138 - Echvi_0535 0.73 +0.2 598,138 - Echvi_0535 0.73 -0.3 598,183 - Echvi_0535 0.76 -0.9 598,183 - Echvi_0535 0.76 -0.7 598,238 + Echvi_0535 0.80 +0.5 598,247 - Echvi_0535 0.80 -0.1 598,247 - Echvi_0535 0.80 -1.0 598,300 + Echvi_0535 0.84 +1.6 598,300 + Echvi_0535 0.84 +0.2 598,434 - -1.1 598,441 - -0.2 598,459 - -0.2 598,462 + +0.5 598,463 - -2.3 598,463 - -0.1 598,464 + -0.5 598,491 + +0.1 598,495 + -0.4 598,496 - -0.2 598,570 - +0.4 598,587 - +2.0 598,619 - +0.4 598,622 + -0.9 598,623 - -1.1 598,639 + -0.2 598,653 + +0.8 598,653 + +0.4 598,653 + -0.6 598,657 + -0.6 598,657 + +1.0 598,658 - -0.2 598,751 + -0.1 598,751 + +0.7 598,752 - -1.0 598,752 - -0.2 598,753 + -1.6 598,754 - -0.7 598,754 - +0.2 598,754 - -2.3 598,754 - +0.4 598,758 + -1.9 598,758 + +0.2 598,759 - +0.4 598,761 - -0.3 598,764 + -0.5 598,765 - +1.6 598,765 - +1.0 598,765 - +1.0 598,796 - -0.3 598,823 + +1.4 598,827 + -0.4 598,827 + -0.5 598,828 - +2.6 598,828 - -0.7 598,828 - -0.3 598,828 - +0.5 598,884 + Echvi_0536 0.17 +1.4 598,884 + Echvi_0536 0.17 +0.1 598,885 - Echvi_0536 0.17 +1.0 598,972 - Echvi_0536 0.33 +2.0 599,017 - Echvi_0536 0.41 +0.1 599,151 + Echvi_0536 0.64 +0.2 599,151 + Echvi_0536 0.64 +1.4 599,160 + Echvi_0536 0.66 +1.4 599,160 + Echvi_0536 0.66 +0.4 599,161 - Echvi_0536 0.66 -0.3 599,195 + Echvi_0536 0.72 +0.5 599,196 - Echvi_0536 0.72 -0.3 599,202 + Echvi_0536 0.73 -0.3 599,202 + Echvi_0536 0.73 -0.0 599,202 + Echvi_0536 0.73 +1.0 599,206 + Echvi_0536 0.74 +0.5 599,312 + -0.3 599,442 + +1.8 599,442 + -0.5 599,443 - +1.2 599,450 - -1.5 599,452 + +0.5 599,452 + -0.2 599,452 + -0.3 599,452 + -0.3 599,453 - -1.4 599,453 - -0.3 599,526 + Echvi_0537 0.14 +1.0 599,548 - Echvi_0537 0.17 -0.2 599,548 - Echvi_0537 0.17 -0.8 599,549 + Echvi_0537 0.17 -0.0 599,549 + Echvi_0537 0.17 +1.0 599,550 - Echvi_0537 0.17 +0.4
Or see this region's nucleotide sequence