Experiment: m.b. Ceftazidime 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19890 and CA264_19895 are separated by 59 nucleotides CA264_19895 and CA264_19900 are separated by 191 nucleotides CA264_19900 and CA264_19905 are separated by 78 nucleotides
CA264_19890: CA264_19890 - non-canonical purine NTP pyrophosphatase, at 4,587,909 to 4,588,487
_19890
CA264_19895: CA264_19895 - phosphoribosyltransferase, at 4,588,547 to 4,589,062
_19895
CA264_19900: CA264_19900 - 50S ribosomal protein L31, at 4,589,254 to 4,589,499
_19900
CA264_19905: CA264_19905 - glucose-1-phosphate thymidylyltransferase, at 4,589,578 to 4,590,783
_19905
Position (kb)
4589
4590 Strain fitness (log2 ratio)
-1
0
1
2 at 4588.304 kb on + strand, within CA264_19890 at 4588.322 kb on - strand, within CA264_19890 at 4588.378 kb on - strand, within CA264_19890 at 4588.415 kb on - strand, within CA264_19890 at 4588.415 kb on - strand, within CA264_19890 at 4588.511 kb on + strand at 4588.511 kb on + strand at 4588.511 kb on + strand at 4588.511 kb on + strand at 4588.511 kb on + strand at 4588.511 kb on + strand at 4588.511 kb on + strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.512 kb on - strand at 4588.513 kb on + strand at 4588.513 kb on + strand at 4588.514 kb on - strand at 4588.514 kb on - strand at 4588.514 kb on - strand at 4588.514 kb on - strand at 4588.516 kb on + strand at 4588.516 kb on + strand at 4588.516 kb on + strand at 4588.517 kb on - strand at 4588.518 kb on + strand at 4588.519 kb on - strand at 4588.519 kb on - strand at 4588.520 kb on + strand at 4588.520 kb on + strand at 4588.521 kb on - strand at 4588.521 kb on - strand at 4588.548 kb on + strand at 4588.549 kb on - strand at 4588.633 kb on - strand, within CA264_19895 at 4588.651 kb on - strand, within CA264_19895 at 4588.728 kb on + strand, within CA264_19895 at 4588.790 kb on - strand, within CA264_19895 at 4588.795 kb on + strand, within CA264_19895 at 4588.796 kb on - strand, within CA264_19895 at 4588.889 kb on + strand, within CA264_19895 at 4588.890 kb on - strand, within CA264_19895 at 4589.062 kb on + strand at 4589.063 kb on - strand at 4589.063 kb on - strand at 4589.063 kb on - strand at 4589.066 kb on + strand at 4589.067 kb on - strand at 4589.097 kb on - strand at 4589.099 kb on - strand at 4589.128 kb on - strand at 4589.155 kb on - strand at 4589.577 kb on + strand at 4589.577 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.0005 mg/ml remove 4,588,304 + CA264_19890 0.68 +0.4 4,588,322 - CA264_19890 0.71 +1.1 4,588,378 - CA264_19890 0.81 +0.0 4,588,415 - CA264_19890 0.87 +1.5 4,588,415 - CA264_19890 0.87 -0.4 4,588,511 + -0.1 4,588,511 + -0.4 4,588,511 + +0.4 4,588,511 + -0.2 4,588,511 + +0.4 4,588,511 + -0.3 4,588,511 + +1.5 4,588,512 - +1.8 4,588,512 - +1.1 4,588,512 - -0.0 4,588,512 - -0.1 4,588,512 - +1.0 4,588,512 - -0.0 4,588,512 - +0.3 4,588,512 - -0.7 4,588,513 + +0.2 4,588,513 + -0.1 4,588,514 - -0.7 4,588,514 - -0.0 4,588,514 - +0.4 4,588,514 - +0.8 4,588,516 + +0.1 4,588,516 + +0.1 4,588,516 + +1.1 4,588,517 - -1.1 4,588,518 + +0.3 4,588,519 - -0.5 4,588,519 - +0.2 4,588,520 + +0.2 4,588,520 + -0.4 4,588,521 - +0.5 4,588,521 - +0.6 4,588,548 + -0.8 4,588,549 - +0.3 4,588,633 - CA264_19895 0.17 +0.7 4,588,651 - CA264_19895 0.20 +0.8 4,588,728 + CA264_19895 0.35 +1.2 4,588,790 - CA264_19895 0.47 +0.9 4,588,795 + CA264_19895 0.48 -0.0 4,588,796 - CA264_19895 0.48 +0.1 4,588,889 + CA264_19895 0.66 +0.2 4,588,890 - CA264_19895 0.66 -0.3 4,589,062 + +0.3 4,589,063 - +0.0 4,589,063 - +0.1 4,589,063 - +1.2 4,589,066 + +0.2 4,589,067 - +0.8 4,589,097 - -0.3 4,589,099 - +1.5 4,589,128 - -0.0 4,589,155 - -0.5 4,589,577 + -1.2 4,589,577 + +0.1
Or see this region's nucleotide sequence