Experiment: m.b. Ceftazidime 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11690 and CA264_11695 are separated by 180 nucleotides CA264_11695 and CA264_11700 are separated by 315 nucleotides
CA264_11690: CA264_11690 - hypothetical protein, at 2,724,345 to 2,725,223
_11690
CA264_11695: CA264_11695 - cell filamentation protein Fic, at 2,725,404 to 2,726,507
_11695
CA264_11700: CA264_11700 - hypothetical protein, at 2,726,823 to 2,727,974
_11700
Position (kb)
2725
2726
2727 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2724.411 kb on - strand at 2724.420 kb on + strand at 2724.430 kb on + strand at 2724.469 kb on + strand, within CA264_11690 at 2724.505 kb on - strand, within CA264_11690 at 2724.505 kb on - strand, within CA264_11690 at 2724.506 kb on + strand, within CA264_11690 at 2724.507 kb on - strand, within CA264_11690 at 2724.507 kb on - strand, within CA264_11690 at 2724.549 kb on + strand, within CA264_11690 at 2724.561 kb on + strand, within CA264_11690 at 2724.562 kb on - strand, within CA264_11690 at 2724.573 kb on + strand, within CA264_11690 at 2724.623 kb on - strand, within CA264_11690 at 2724.681 kb on - strand, within CA264_11690 at 2724.681 kb on - strand, within CA264_11690 at 2724.689 kb on + strand, within CA264_11690 at 2724.689 kb on + strand, within CA264_11690 at 2724.750 kb on + strand, within CA264_11690 at 2724.782 kb on - strand, within CA264_11690 at 2724.841 kb on - strand, within CA264_11690 at 2724.882 kb on + strand, within CA264_11690 at 2724.961 kb on - strand, within CA264_11690 at 2724.968 kb on - strand, within CA264_11690 at 2725.000 kb on - strand, within CA264_11690 at 2725.088 kb on - strand, within CA264_11690 at 2725.129 kb on + strand, within CA264_11690 at 2725.180 kb on + strand at 2725.181 kb on - strand at 2725.329 kb on - strand at 2725.329 kb on - strand at 2725.330 kb on + strand at 2725.331 kb on - strand at 2725.406 kb on - strand at 2725.522 kb on - strand, within CA264_11695 at 2725.522 kb on - strand, within CA264_11695 at 2725.541 kb on + strand, within CA264_11695 at 2725.585 kb on - strand, within CA264_11695 at 2725.803 kb on + strand, within CA264_11695 at 2725.904 kb on - strand, within CA264_11695 at 2725.906 kb on - strand, within CA264_11695 at 2726.306 kb on - strand, within CA264_11695 at 2726.457 kb on + strand at 2726.457 kb on + strand at 2726.457 kb on + strand at 2726.458 kb on - strand at 2726.612 kb on - strand at 2726.631 kb on + strand at 2726.632 kb on - strand at 2726.701 kb on + strand at 2726.779 kb on - strand at 2726.816 kb on - strand at 2726.819 kb on + strand at 2726.820 kb on - strand at 2726.831 kb on + strand at 2726.842 kb on - strand at 2726.886 kb on + strand at 2726.887 kb on - strand at 2726.896 kb on + strand at 2726.909 kb on + strand at 2726.909 kb on + strand at 2726.910 kb on - strand at 2726.931 kb on + strand at 2727.015 kb on - strand, within CA264_11700 at 2727.077 kb on - strand, within CA264_11700 at 2727.082 kb on + strand, within CA264_11700 at 2727.464 kb on + strand, within CA264_11700 at 2727.464 kb on + strand, within CA264_11700 at 2727.473 kb on + strand, within CA264_11700 at 2727.474 kb on - strand, within CA264_11700 at 2727.486 kb on + strand, within CA264_11700 at 2727.486 kb on + strand, within CA264_11700 at 2727.499 kb on - strand, within CA264_11700 at 2727.499 kb on - strand, within CA264_11700 at 2727.500 kb on + strand, within CA264_11700
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.0005 mg/ml remove 2,724,411 - -0.0 2,724,420 + -0.5 2,724,430 + -0.0 2,724,469 + CA264_11690 0.14 -2.0 2,724,505 - CA264_11690 0.18 -1.1 2,724,505 - CA264_11690 0.18 +0.9 2,724,506 + CA264_11690 0.18 -0.6 2,724,507 - CA264_11690 0.18 -0.5 2,724,507 - CA264_11690 0.18 -0.5 2,724,549 + CA264_11690 0.23 -0.1 2,724,561 + CA264_11690 0.25 +1.7 2,724,562 - CA264_11690 0.25 -0.2 2,724,573 + CA264_11690 0.26 -0.5 2,724,623 - CA264_11690 0.32 -0.1 2,724,681 - CA264_11690 0.38 -0.2 2,724,681 - CA264_11690 0.38 -0.3 2,724,689 + CA264_11690 0.39 -0.0 2,724,689 + CA264_11690 0.39 +0.5 2,724,750 + CA264_11690 0.46 +0.1 2,724,782 - CA264_11690 0.50 -0.3 2,724,841 - CA264_11690 0.56 -0.1 2,724,882 + CA264_11690 0.61 +0.1 2,724,961 - CA264_11690 0.70 +0.8 2,724,968 - CA264_11690 0.71 -0.2 2,725,000 - CA264_11690 0.75 -0.6 2,725,088 - CA264_11690 0.85 +0.3 2,725,129 + CA264_11690 0.89 -0.1 2,725,180 + -0.8 2,725,181 - +0.1 2,725,329 - +0.8 2,725,329 - -1.0 2,725,330 + +0.2 2,725,331 - +1.0 2,725,406 - -0.7 2,725,522 - CA264_11695 0.11 +0.2 2,725,522 - CA264_11695 0.11 -0.9 2,725,541 + CA264_11695 0.12 -0.6 2,725,585 - CA264_11695 0.16 +1.0 2,725,803 + CA264_11695 0.36 +0.2 2,725,904 - CA264_11695 0.45 +0.1 2,725,906 - CA264_11695 0.45 -0.8 2,726,306 - CA264_11695 0.82 -0.3 2,726,457 + -0.7 2,726,457 + -0.8 2,726,457 + -0.2 2,726,458 - +0.7 2,726,612 - +0.3 2,726,631 + -0.5 2,726,632 - +1.1 2,726,701 + +0.1 2,726,779 - -0.1 2,726,816 - -1.8 2,726,819 + -0.6 2,726,820 - -0.3 2,726,831 + -0.5 2,726,842 - -0.0 2,726,886 + -0.6 2,726,887 - +1.8 2,726,896 + -0.3 2,726,909 + -0.6 2,726,909 + -0.6 2,726,910 - -1.8 2,726,931 + -0.3 2,727,015 - CA264_11700 0.17 +1.5 2,727,077 - CA264_11700 0.22 +1.4 2,727,082 + CA264_11700 0.22 +0.3 2,727,464 + CA264_11700 0.56 +0.0 2,727,464 + CA264_11700 0.56 -0.9 2,727,473 + CA264_11700 0.56 -0.3 2,727,474 - CA264_11700 0.57 -0.3 2,727,486 + CA264_11700 0.58 -0.7 2,727,486 + CA264_11700 0.58 +0.6 2,727,499 - CA264_11700 0.59 -0.4 2,727,499 - CA264_11700 0.59 +0.4 2,727,500 + CA264_11700 0.59 -0.6
Or see this region's nucleotide sequence