Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07760

Experiment: m.b. Ceftazidime 0.0005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07750 and CA264_07755 are separated by 3 nucleotidesCA264_07755 and CA264_07760 are separated by 105 nucleotidesCA264_07760 and CA264_07765 are separated by 236 nucleotides CA264_07750: CA264_07750 - elongation factor P, at 1,795,824 to 1,796,387 _07750 CA264_07755: CA264_07755 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 1,796,391 to 1,796,882 _07755 CA264_07760: CA264_07760 - acetyl-CoA carboxylase biotin carboxylase subunit, at 1,796,988 to 1,798,334 _07760 CA264_07765: CA264_07765 - hypothetical protein, at 1,798,571 to 1,799,407 _07765 Position (kb) 1796 1797 1798 1799Strain fitness (log2 ratio) -3 -2 -1 0 1at 1796.057 kb on - strand, within CA264_07750at 1796.062 kb on - strand, within CA264_07750at 1796.226 kb on - strand, within CA264_07750at 1796.226 kb on - strand, within CA264_07750at 1798.363 kb on + strandat 1798.363 kb on + strandat 1798.363 kb on + strandat 1798.371 kb on + strandat 1798.411 kb on + strandat 1798.411 kb on + strandat 1798.411 kb on + strandat 1798.411 kb on + strandat 1798.411 kb on + strandat 1798.412 kb on - strandat 1798.412 kb on - strandat 1798.412 kb on - strandat 1798.412 kb on - strandat 1798.441 kb on - strandat 1798.442 kb on + strandat 1798.443 kb on - strandat 1798.445 kb on + strandat 1798.446 kb on - strandat 1798.453 kb on + strandat 1798.453 kb on + strandat 1798.454 kb on - strandat 1798.462 kb on + strandat 1798.473 kb on + strandat 1798.473 kb on + strandat 1798.555 kb on - strandat 1798.556 kb on + strandat 1798.590 kb on + strandat 1798.590 kb on + strandat 1798.611 kb on + strandat 1798.650 kb on + strandat 1798.650 kb on + strandat 1798.651 kb on - strandat 1798.692 kb on - strand, within CA264_07765at 1798.700 kb on + strand, within CA264_07765at 1798.735 kb on + strand, within CA264_07765at 1798.814 kb on + strand, within CA264_07765at 1798.814 kb on + strand, within CA264_07765at 1798.815 kb on - strand, within CA264_07765at 1798.874 kb on - strand, within CA264_07765at 1798.874 kb on - strand, within CA264_07765at 1798.928 kb on + strand, within CA264_07765at 1798.957 kb on + strand, within CA264_07765at 1798.983 kb on + strand, within CA264_07765at 1799.015 kb on + strand, within CA264_07765at 1799.117 kb on + strand, within CA264_07765at 1799.165 kb on + strand, within CA264_07765at 1799.239 kb on - strand, within CA264_07765at 1799.263 kb on + strand, within CA264_07765at 1799.264 kb on - strand, within CA264_07765

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.0005 mg/ml
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1,796,057 - CA264_07750 0.41 -1.9
1,796,062 - CA264_07750 0.42 -3.0
1,796,226 - CA264_07750 0.71 -0.0
1,796,226 - CA264_07750 0.71 -1.4
1,798,363 + +0.5
1,798,363 + -0.3
1,798,363 + -1.3
1,798,371 + -0.7
1,798,411 + +1.3
1,798,411 + -0.7
1,798,411 + -0.2
1,798,411 + -0.2
1,798,411 + -0.1
1,798,412 - -0.4
1,798,412 - -1.7
1,798,412 - -0.7
1,798,412 - -0.4
1,798,441 - -0.1
1,798,442 + +0.2
1,798,443 - -1.3
1,798,445 + +0.6
1,798,446 - -0.7
1,798,453 + +0.3
1,798,453 + -0.1
1,798,454 - +1.1
1,798,462 + -0.5
1,798,473 + -0.3
1,798,473 + -0.3
1,798,555 - -0.1
1,798,556 + +0.6
1,798,590 + -0.3
1,798,590 + -0.2
1,798,611 + +0.1
1,798,650 + +0.4
1,798,650 + -0.2
1,798,651 - -0.7
1,798,692 - CA264_07765 0.14 +0.2
1,798,700 + CA264_07765 0.15 -0.7
1,798,735 + CA264_07765 0.20 +0.6
1,798,814 + CA264_07765 0.29 -0.5
1,798,814 + CA264_07765 0.29 +0.3
1,798,815 - CA264_07765 0.29 -0.6
1,798,874 - CA264_07765 0.36 -0.2
1,798,874 - CA264_07765 0.36 -0.8
1,798,928 + CA264_07765 0.43 +0.4
1,798,957 + CA264_07765 0.46 +0.7
1,798,983 + CA264_07765 0.49 +0.4
1,799,015 + CA264_07765 0.53 -0.2
1,799,117 + CA264_07765 0.65 -0.1
1,799,165 + CA264_07765 0.71 +0.2
1,799,239 - CA264_07765 0.80 -0.4
1,799,263 + CA264_07765 0.83 -0.8
1,799,264 - CA264_07765 0.83 -0.5

Or see this region's nucleotide sequence