Experiment: m.b. Ceftazidime 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03805 and CA264_03810 are separated by 99 nucleotides CA264_03810 and CA264_03815 are separated by 6 nucleotides CA264_03815 and CA264_03820 are separated by 216 nucleotides
CA264_03805: CA264_03805 - serine protease, at 889,515 to 890,885
_03805
CA264_03810: CA264_03810 - hypothetical protein, at 890,985 to 891,761
_03810
CA264_03815: CA264_03815 - peptidoglycan-binding protein, at 891,768 to 892,748
_03815
CA264_03820: CA264_03820 - ketoacyl-ACP synthase III, at 892,965 to 893,963
_03820
Position (kb) 891
892
893 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 890.846 kb on - strand at 890.848 kb on + strand at 890.848 kb on + strand at 890.848 kb on + strand at 890.848 kb on + strand at 890.849 kb on - strand at 890.902 kb on - strand at 890.923 kb on - strand at 890.925 kb on + strand at 890.946 kb on - strand at 890.946 kb on - strand at 890.946 kb on - strand at 890.946 kb on - strand at 890.951 kb on - strand at 890.951 kb on - strand at 890.951 kb on - strand at 890.963 kb on + strand at 890.963 kb on + strand at 891.067 kb on - strand, within CA264_03810 at 891.451 kb on - strand, within CA264_03810 at 891.529 kb on + strand, within CA264_03810 at 891.529 kb on + strand, within CA264_03810 at 891.530 kb on - strand, within CA264_03810 at 891.595 kb on + strand, within CA264_03810 at 891.595 kb on + strand, within CA264_03810 at 891.596 kb on - strand, within CA264_03810 at 891.608 kb on - strand, within CA264_03810 at 891.710 kb on - strand at 891.773 kb on - strand at 891.773 kb on - strand at 891.773 kb on - strand at 891.859 kb on + strand at 891.900 kb on - strand, within CA264_03815 at 891.985 kb on + strand, within CA264_03815 at 892.122 kb on - strand, within CA264_03815 at 892.291 kb on - strand, within CA264_03815 at 892.446 kb on + strand, within CA264_03815 at 892.539 kb on + strand, within CA264_03815 at 892.539 kb on + strand, within CA264_03815 at 892.737 kb on + strand at 892.877 kb on + strand at 892.947 kb on - strand at 892.947 kb on - strand at 892.948 kb on + strand at 892.952 kb on + strand at 892.978 kb on + strand at 892.979 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.0005 mg/ml remove 890,846 - +0.4 890,848 + +1.3 890,848 + +0.9 890,848 + +0.7 890,848 + +0.8 890,849 - +0.7 890,902 - +0.7 890,923 - -0.8 890,925 + +0.6 890,946 - +0.2 890,946 - +0.5 890,946 - +0.6 890,946 - +0.8 890,951 - +1.3 890,951 - +0.8 890,951 - +1.6 890,963 + -0.1 890,963 + -0.3 891,067 - CA264_03810 0.11 +0.4 891,451 - CA264_03810 0.60 +1.7 891,529 + CA264_03810 0.70 -0.6 891,529 + CA264_03810 0.70 +0.3 891,530 - CA264_03810 0.70 -1.1 891,595 + CA264_03810 0.79 -0.1 891,595 + CA264_03810 0.79 +0.6 891,596 - CA264_03810 0.79 -0.2 891,608 - CA264_03810 0.80 +0.0 891,710 - -0.3 891,773 - -1.6 891,773 - -1.7 891,773 - -0.8 891,859 + -3.1 891,900 - CA264_03815 0.13 -1.9 891,985 + CA264_03815 0.22 -3.2 892,122 - CA264_03815 0.36 -0.8 892,291 - CA264_03815 0.53 -1.8 892,446 + CA264_03815 0.69 -2.9 892,539 + CA264_03815 0.79 -2.1 892,539 + CA264_03815 0.79 -2.2 892,737 + -3.7 892,877 + -0.2 892,947 - +0.0 892,947 - +0.1 892,948 + -0.8 892,952 + -1.0 892,978 + -1.1 892,979 - -0.0
Or see this region's nucleotide sequence