Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2150

Experiment: m.b. Vancomycin 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2149 and B158DRAFT_2150 are separated by 148 nucleotidesB158DRAFT_2150 and B158DRAFT_2152 are separated by 416 nucleotides B158DRAFT_2149: B158DRAFT_2149 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 286,179 to 288,437 _2149 B158DRAFT_2150: B158DRAFT_2150 - Glucose/sorbosone dehydrogenases, at 288,586 to 289,671 _2150 B158DRAFT_2152: B158DRAFT_2152 - Predicted metalloendopeptidase, at 290,088 to 292,181 _2152 Position (kb) 288 289 290Strain fitness (log2 ratio) -2 -1 0 1at 287.589 kb on + strand, within B158DRAFT_2149at 287.597 kb on - strand, within B158DRAFT_2149at 287.630 kb on + strand, within B158DRAFT_2149at 287.690 kb on + strand, within B158DRAFT_2149at 287.690 kb on + strand, within B158DRAFT_2149at 287.698 kb on - strand, within B158DRAFT_2149at 287.698 kb on - strand, within B158DRAFT_2149at 287.706 kb on + strand, within B158DRAFT_2149at 287.742 kb on - strand, within B158DRAFT_2149at 287.742 kb on - strand, within B158DRAFT_2149at 287.781 kb on + strand, within B158DRAFT_2149at 287.800 kb on + strand, within B158DRAFT_2149at 287.984 kb on - strand, within B158DRAFT_2149at 287.999 kb on + strand, within B158DRAFT_2149at 288.112 kb on - strand, within B158DRAFT_2149at 288.142 kb on - strand, within B158DRAFT_2149at 288.163 kb on - strand, within B158DRAFT_2149at 288.168 kb on - strand, within B158DRAFT_2149at 288.198 kb on - strand, within B158DRAFT_2149at 288.297 kb on - strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.309 kb on + strandat 288.395 kb on + strandat 288.395 kb on + strandat 288.398 kb on - strandat 288.403 kb on - strandat 288.513 kb on + strandat 288.547 kb on + strandat 288.619 kb on + strandat 288.671 kb on - strandat 288.799 kb on - strand, within B158DRAFT_2150at 289.142 kb on - strand, within B158DRAFT_2150at 289.142 kb on - strand, within B158DRAFT_2150at 289.156 kb on - strand, within B158DRAFT_2150at 289.218 kb on + strand, within B158DRAFT_2150at 289.218 kb on + strand, within B158DRAFT_2150at 289.286 kb on + strand, within B158DRAFT_2150at 289.292 kb on - strand, within B158DRAFT_2150at 289.336 kb on - strand, within B158DRAFT_2150at 289.336 kb on - strand, within B158DRAFT_2150at 289.338 kb on + strand, within B158DRAFT_2150at 289.399 kb on + strand, within B158DRAFT_2150at 289.442 kb on + strand, within B158DRAFT_2150at 289.515 kb on + strand, within B158DRAFT_2150at 289.525 kb on + strand, within B158DRAFT_2150at 289.533 kb on - strand, within B158DRAFT_2150at 289.564 kb on + strandat 289.564 kb on + strandat 289.572 kb on - strandat 289.572 kb on - strandat 289.572 kb on - strandat 289.572 kb on - strandat 289.638 kb on + strandat 289.646 kb on - strandat 289.646 kb on - strandat 289.646 kb on - strandat 289.646 kb on - strandat 289.646 kb on - strandat 289.651 kb on - strandat 290.196 kb on + strandat 290.209 kb on - strandat 290.305 kb on + strand, within B158DRAFT_2152at 290.377 kb on - strand, within B158DRAFT_2152at 290.416 kb on + strand, within B158DRAFT_2152at 290.431 kb on + strand, within B158DRAFT_2152at 290.441 kb on - strand, within B158DRAFT_2152at 290.605 kb on + strand, within B158DRAFT_2152

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.2 mg/ml
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287,589 + B158DRAFT_2149 0.62 +0.1
287,597 - B158DRAFT_2149 0.63 -0.2
287,630 + B158DRAFT_2149 0.64 -0.2
287,690 + B158DRAFT_2149 0.67 -0.3
287,690 + B158DRAFT_2149 0.67 -0.3
287,698 - B158DRAFT_2149 0.67 +0.3
287,698 - B158DRAFT_2149 0.67 -0.7
287,706 + B158DRAFT_2149 0.68 -0.6
287,742 - B158DRAFT_2149 0.69 -0.6
287,742 - B158DRAFT_2149 0.69 -0.8
287,781 + B158DRAFT_2149 0.71 +0.1
287,800 + B158DRAFT_2149 0.72 +0.0
287,984 - B158DRAFT_2149 0.80 -0.3
287,999 + B158DRAFT_2149 0.81 -0.7
288,112 - B158DRAFT_2149 0.86 -0.2
288,142 - B158DRAFT_2149 0.87 -0.3
288,163 - B158DRAFT_2149 0.88 -1.0
288,168 - B158DRAFT_2149 0.88 -0.1
288,198 - B158DRAFT_2149 0.89 -0.1
288,297 - -0.5
288,299 + -1.3
288,299 + +0.1
288,299 + +0.1
288,299 + -0.2
288,299 + -0.1
288,299 + -0.4
288,307 - -0.2
288,307 - -0.6
288,307 - -0.2
288,307 - -0.2
288,307 - -0.0
288,309 + -0.4
288,395 + +1.0
288,395 + -0.4
288,398 - -0.4
288,403 - -0.3
288,513 + -0.3
288,547 + +0.1
288,619 + +0.2
288,671 - -0.3
288,799 - B158DRAFT_2150 0.20 -0.4
289,142 - B158DRAFT_2150 0.51 +0.1
289,142 - B158DRAFT_2150 0.51 +0.0
289,156 - B158DRAFT_2150 0.52 +0.1
289,218 + B158DRAFT_2150 0.58 -0.4
289,218 + B158DRAFT_2150 0.58 -0.7
289,286 + B158DRAFT_2150 0.64 -0.4
289,292 - B158DRAFT_2150 0.65 -0.8
289,336 - B158DRAFT_2150 0.69 -0.3
289,336 - B158DRAFT_2150 0.69 +0.2
289,338 + B158DRAFT_2150 0.69 +0.3
289,399 + B158DRAFT_2150 0.75 -2.0
289,442 + B158DRAFT_2150 0.79 -0.5
289,515 + B158DRAFT_2150 0.86 -0.3
289,525 + B158DRAFT_2150 0.86 -0.4
289,533 - B158DRAFT_2150 0.87 -1.4
289,564 + -0.4
289,564 + +0.1
289,572 - +0.2
289,572 - -0.4
289,572 - +0.1
289,572 - -0.5
289,638 + +0.1
289,646 - -0.2
289,646 - -0.4
289,646 - +0.2
289,646 - +0.5
289,646 - -0.4
289,651 - -0.2
290,196 + +0.3
290,209 - +0.4
290,305 + B158DRAFT_2152 0.10 -1.1
290,377 - B158DRAFT_2152 0.14 -0.3
290,416 + B158DRAFT_2152 0.16 -0.1
290,431 + B158DRAFT_2152 0.16 +0.2
290,441 - B158DRAFT_2152 0.17 -0.1
290,605 + B158DRAFT_2152 0.25 +0.0

Or see this region's nucleotide sequence