Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1950

Experiment: m.b. Vancomycin 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1949 and B158DRAFT_1950 are separated by 42 nucleotidesB158DRAFT_1950 and B158DRAFT_1951 are separated by 47 nucleotides B158DRAFT_1949: B158DRAFT_1949 - N-acetylmuramoyl-L-alanine amidase, at 84,815 to 86,098 _1949 B158DRAFT_1950: B158DRAFT_1950 - DNA mismatch repair protein MutL, at 86,141 to 87,901 _1950 B158DRAFT_1951: B158DRAFT_1951 - tRNA dimethylallyltransferase, at 87,949 to 88,902 _1951 Position (kb) 86 87 88Strain fitness (log2 ratio) -2 -1 0 1 2 3at 85.143 kb on + strand, within B158DRAFT_1949at 85.213 kb on - strand, within B158DRAFT_1949at 85.247 kb on + strand, within B158DRAFT_1949at 85.247 kb on + strand, within B158DRAFT_1949at 85.415 kb on + strand, within B158DRAFT_1949at 85.423 kb on - strand, within B158DRAFT_1949at 85.442 kb on - strand, within B158DRAFT_1949at 85.444 kb on + strand, within B158DRAFT_1949at 85.476 kb on - strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.528 kb on + strand, within B158DRAFT_1949at 85.536 kb on - strand, within B158DRAFT_1949at 85.536 kb on - strand, within B158DRAFT_1949at 85.571 kb on + strand, within B158DRAFT_1949at 85.574 kb on - strand, within B158DRAFT_1949at 85.576 kb on + strand, within B158DRAFT_1949at 85.593 kb on + strand, within B158DRAFT_1949at 85.594 kb on - strand, within B158DRAFT_1949at 85.594 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.601 kb on - strand, within B158DRAFT_1949at 85.604 kb on - strand, within B158DRAFT_1949at 85.629 kb on + strand, within B158DRAFT_1949at 85.637 kb on - strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.674 kb on + strand, within B158DRAFT_1949at 85.682 kb on - strand, within B158DRAFT_1949at 85.682 kb on - strand, within B158DRAFT_1949at 85.692 kb on - strand, within B158DRAFT_1949at 85.799 kb on + strand, within B158DRAFT_1949at 85.807 kb on - strand, within B158DRAFT_1949at 85.840 kb on - strand, within B158DRAFT_1949at 85.899 kb on + strand, within B158DRAFT_1949at 85.899 kb on + strand, within B158DRAFT_1949at 85.907 kb on - strand, within B158DRAFT_1949at 85.907 kb on - strand, within B158DRAFT_1949at 85.907 kb on - strand, within B158DRAFT_1949at 85.982 kb on - strandat 85.984 kb on + strandat 85.984 kb on + strandat 85.984 kb on + strandat 85.992 kb on - strandat 85.992 kb on - strandat 85.992 kb on - strandat 85.992 kb on - strandat 85.992 kb on - strandat 85.992 kb on - strandat 86.021 kb on + strandat 86.021 kb on + strandat 86.029 kb on - strandat 86.029 kb on - strandat 86.029 kb on - strandat 86.203 kb on - strandat 86.203 kb on - strandat 86.289 kb on + strandat 86.294 kb on + strandat 86.294 kb on + strandat 86.302 kb on - strandat 86.318 kb on + strand, within B158DRAFT_1950at 86.319 kb on - strand, within B158DRAFT_1950at 86.326 kb on + strand, within B158DRAFT_1950at 86.326 kb on + strand, within B158DRAFT_1950at 86.348 kb on - strand, within B158DRAFT_1950at 86.432 kb on + strand, within B158DRAFT_1950at 86.432 kb on + strand, within B158DRAFT_1950at 86.440 kb on - strand, within B158DRAFT_1950at 86.440 kb on - strand, within B158DRAFT_1950at 86.440 kb on - strand, within B158DRAFT_1950at 86.500 kb on - strand, within B158DRAFT_1950at 86.562 kb on - strand, within B158DRAFT_1950at 86.685 kb on + strand, within B158DRAFT_1950at 86.703 kb on + strand, within B158DRAFT_1950at 86.733 kb on - strand, within B158DRAFT_1950at 86.786 kb on - strand, within B158DRAFT_1950at 86.824 kb on - strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.826 kb on + strand, within B158DRAFT_1950at 86.834 kb on - strand, within B158DRAFT_1950at 86.916 kb on + strand, within B158DRAFT_1950at 86.924 kb on - strand, within B158DRAFT_1950at 86.932 kb on - strand, within B158DRAFT_1950at 86.972 kb on - strand, within B158DRAFT_1950at 87.010 kb on - strand, within B158DRAFT_1950at 87.039 kb on - strand, within B158DRAFT_1950at 87.081 kb on - strand, within B158DRAFT_1950at 87.129 kb on - strand, within B158DRAFT_1950at 87.129 kb on - strand, within B158DRAFT_1950at 87.129 kb on - strand, within B158DRAFT_1950at 87.154 kb on - strand, within B158DRAFT_1950at 87.167 kb on + strand, within B158DRAFT_1950at 87.232 kb on + strand, within B158DRAFT_1950at 87.355 kb on + strand, within B158DRAFT_1950at 87.363 kb on - strand, within B158DRAFT_1950at 87.444 kb on + strand, within B158DRAFT_1950at 87.451 kb on + strand, within B158DRAFT_1950at 87.452 kb on - strand, within B158DRAFT_1950at 87.452 kb on - strand, within B158DRAFT_1950at 87.480 kb on - strand, within B158DRAFT_1950at 87.500 kb on + strand, within B158DRAFT_1950at 87.514 kb on + strand, within B158DRAFT_1950at 87.628 kb on + strand, within B158DRAFT_1950at 87.628 kb on + strand, within B158DRAFT_1950at 87.636 kb on - strand, within B158DRAFT_1950at 87.653 kb on + strand, within B158DRAFT_1950at 87.725 kb on + strand, within B158DRAFT_1950at 87.757 kb on + strandat 87.757 kb on + strandat 87.804 kb on + strandat 87.812 kb on - strandat 87.853 kb on + strandat 87.853 kb on + strandat 87.853 kb on + strandat 87.861 kb on + strandat 87.861 kb on - strandat 87.861 kb on - strandat 87.869 kb on - strandat 87.869 kb on - strandat 87.869 kb on - strandat 87.869 kb on - strandat 87.869 kb on - strandat 87.925 kb on + strandat 87.960 kb on + strandat 88.050 kb on + strand, within B158DRAFT_1951at 88.050 kb on + strand, within B158DRAFT_1951at 88.070 kb on + strand, within B158DRAFT_1951at 88.070 kb on + strand, within B158DRAFT_1951at 88.073 kb on - strand, within B158DRAFT_1951at 88.096 kb on + strand, within B158DRAFT_1951at 88.102 kb on + strand, within B158DRAFT_1951at 88.132 kb on + strand, within B158DRAFT_1951at 88.132 kb on + strand, within B158DRAFT_1951at 88.132 kb on + strand, within B158DRAFT_1951at 88.137 kb on + strand, within B158DRAFT_1951at 88.140 kb on - strand, within B158DRAFT_1951at 88.152 kb on - strand, within B158DRAFT_1951at 88.182 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.245 kb on + strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.253 kb on - strand, within B158DRAFT_1951at 88.372 kb on + strand, within B158DRAFT_1951at 88.380 kb on - strand, within B158DRAFT_1951at 88.380 kb on - strand, within B158DRAFT_1951at 88.424 kb on + strand, within B158DRAFT_1951at 88.432 kb on - strand, within B158DRAFT_1951at 88.456 kb on + strand, within B158DRAFT_1951at 88.492 kb on + strand, within B158DRAFT_1951at 88.492 kb on + strand, within B158DRAFT_1951at 88.492 kb on + strand, within B158DRAFT_1951at 88.500 kb on - strand, within B158DRAFT_1951at 88.560 kb on + strand, within B158DRAFT_1951at 88.560 kb on + strand, within B158DRAFT_1951at 88.580 kb on + strand, within B158DRAFT_1951at 88.651 kb on + strand, within B158DRAFT_1951at 88.686 kb on - strand, within B158DRAFT_1951at 88.743 kb on - strand, within B158DRAFT_1951at 88.759 kb on - strand, within B158DRAFT_1951at 88.774 kb on - strand, within B158DRAFT_1951at 88.794 kb on + strand, within B158DRAFT_1951at 88.794 kb on + strand, within B158DRAFT_1951at 88.809 kb on + strandat 88.809 kb on + strandat 88.817 kb on - strandat 88.835 kb on + strandat 88.835 kb on + strandat 88.852 kb on + strandat 88.853 kb on + strandat 88.855 kb on + strandat 88.860 kb on - strandat 88.860 kb on - strandat 88.860 kb on - strandat 88.860 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.2 mg/ml
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85,143 + B158DRAFT_1949 0.26 +0.2
85,213 - B158DRAFT_1949 0.31 +0.4
85,247 + B158DRAFT_1949 0.34 +0.3
85,247 + B158DRAFT_1949 0.34 -0.2
85,415 + B158DRAFT_1949 0.47 +0.2
85,423 - B158DRAFT_1949 0.47 -0.4
85,442 - B158DRAFT_1949 0.49 -0.0
85,444 + B158DRAFT_1949 0.49 +0.4
85,476 - B158DRAFT_1949 0.51 -0.4
85,528 + B158DRAFT_1949 0.56 -0.0
85,528 + B158DRAFT_1949 0.56 +0.4
85,528 + B158DRAFT_1949 0.56 +0.1
85,528 + B158DRAFT_1949 0.56 -0.2
85,536 - B158DRAFT_1949 0.56 +0.2
85,536 - B158DRAFT_1949 0.56 +0.0
85,571 + B158DRAFT_1949 0.59 -2.0
85,574 - B158DRAFT_1949 0.59 -0.1
85,576 + B158DRAFT_1949 0.59 +0.3
85,593 + B158DRAFT_1949 0.61 +0.1
85,594 - B158DRAFT_1949 0.61 -0.1
85,594 - B158DRAFT_1949 0.61 -0.5
85,601 - B158DRAFT_1949 0.61 -0.0
85,601 - B158DRAFT_1949 0.61 -0.4
85,601 - B158DRAFT_1949 0.61 -0.6
85,601 - B158DRAFT_1949 0.61 +0.7
85,601 - B158DRAFT_1949 0.61 -0.7
85,604 - B158DRAFT_1949 0.61 +0.3
85,629 + B158DRAFT_1949 0.63 -0.1
85,637 - B158DRAFT_1949 0.64 -0.4
85,674 + B158DRAFT_1949 0.67 +0.1
85,674 + B158DRAFT_1949 0.67 +0.3
85,674 + B158DRAFT_1949 0.67 +0.1
85,674 + B158DRAFT_1949 0.67 -0.1
85,682 - B158DRAFT_1949 0.68 +0.1
85,682 - B158DRAFT_1949 0.68 -0.3
85,692 - B158DRAFT_1949 0.68 +0.2
85,799 + B158DRAFT_1949 0.77 -0.0
85,807 - B158DRAFT_1949 0.77 +0.2
85,840 - B158DRAFT_1949 0.80 -0.3
85,899 + B158DRAFT_1949 0.84 +0.4
85,899 + B158DRAFT_1949 0.84 +0.8
85,907 - B158DRAFT_1949 0.85 -0.7
85,907 - B158DRAFT_1949 0.85 -0.2
85,907 - B158DRAFT_1949 0.85 -0.2
85,982 - +0.1
85,984 + +0.7
85,984 + +0.0
85,984 + -0.2
85,992 - -0.1
85,992 - -0.7
85,992 - -0.1
85,992 - -0.4
85,992 - -0.2
85,992 - +0.0
86,021 + +0.0
86,021 + +0.2
86,029 - +0.5
86,029 - +0.4
86,029 - -0.2
86,203 - +0.6
86,203 - -0.4
86,289 + -0.2
86,294 + -0.0
86,294 + -0.2
86,302 - -0.5
86,318 + B158DRAFT_1950 0.10 -0.2
86,319 - B158DRAFT_1950 0.10 -1.0
86,326 + B158DRAFT_1950 0.11 -0.3
86,326 + B158DRAFT_1950 0.11 +0.2
86,348 - B158DRAFT_1950 0.12 -0.3
86,432 + B158DRAFT_1950 0.17 -0.0
86,432 + B158DRAFT_1950 0.17 +0.5
86,440 - B158DRAFT_1950 0.17 -0.0
86,440 - B158DRAFT_1950 0.17 +0.0
86,440 - B158DRAFT_1950 0.17 -1.5
86,500 - B158DRAFT_1950 0.20 -0.5
86,562 - B158DRAFT_1950 0.24 +0.3
86,685 + B158DRAFT_1950 0.31 +3.1
86,703 + B158DRAFT_1950 0.32 +0.2
86,733 - B158DRAFT_1950 0.34 -0.2
86,786 - B158DRAFT_1950 0.37 -0.4
86,824 - B158DRAFT_1950 0.39 -0.2
86,826 + B158DRAFT_1950 0.39 +0.2
86,826 + B158DRAFT_1950 0.39 -0.1
86,826 + B158DRAFT_1950 0.39 +0.0
86,826 + B158DRAFT_1950 0.39 +0.0
86,826 + B158DRAFT_1950 0.39 -0.1
86,826 + B158DRAFT_1950 0.39 -0.5
86,826 + B158DRAFT_1950 0.39 +2.5
86,834 - B158DRAFT_1950 0.39 -0.3
86,916 + B158DRAFT_1950 0.44 -0.1
86,924 - B158DRAFT_1950 0.44 -0.2
86,932 - B158DRAFT_1950 0.45 -0.2
86,972 - B158DRAFT_1950 0.47 +0.2
87,010 - B158DRAFT_1950 0.49 -0.3
87,039 - B158DRAFT_1950 0.51 -0.3
87,081 - B158DRAFT_1950 0.53 -0.6
87,129 - B158DRAFT_1950 0.56 -0.0
87,129 - B158DRAFT_1950 0.56 -0.5
87,129 - B158DRAFT_1950 0.56 -0.1
87,154 - B158DRAFT_1950 0.58 -0.6
87,167 + B158DRAFT_1950 0.58 -0.0
87,232 + B158DRAFT_1950 0.62 -0.4
87,355 + B158DRAFT_1950 0.69 -0.1
87,363 - B158DRAFT_1950 0.69 -0.1
87,444 + B158DRAFT_1950 0.74 -0.6
87,451 + B158DRAFT_1950 0.74 -0.8
87,452 - B158DRAFT_1950 0.74 -0.4
87,452 - B158DRAFT_1950 0.74 -0.3
87,480 - B158DRAFT_1950 0.76 -0.1
87,500 + B158DRAFT_1950 0.77 -0.1
87,514 + B158DRAFT_1950 0.78 -0.1
87,628 + B158DRAFT_1950 0.84 -0.5
87,628 + B158DRAFT_1950 0.84 -0.6
87,636 - B158DRAFT_1950 0.85 -0.4
87,653 + B158DRAFT_1950 0.86 -0.4
87,725 + B158DRAFT_1950 0.90 -0.6
87,757 + -0.7
87,757 + -0.2
87,804 + -0.6
87,812 - -0.6
87,853 + -0.4
87,853 + -0.5
87,853 + -0.7
87,861 + -0.2
87,861 - -0.3
87,861 - -0.4
87,869 - -0.6
87,869 - +0.5
87,869 - +0.2
87,869 - -0.7
87,869 - -0.5
87,925 + -0.3
87,960 + -0.3
88,050 + B158DRAFT_1951 0.11 -1.3
88,050 + B158DRAFT_1951 0.11 -0.5
88,070 + B158DRAFT_1951 0.13 -0.0
88,070 + B158DRAFT_1951 0.13 -0.8
88,073 - B158DRAFT_1951 0.13 -0.2
88,096 + B158DRAFT_1951 0.15 -0.4
88,102 + B158DRAFT_1951 0.16 -0.6
88,132 + B158DRAFT_1951 0.19 -1.6
88,132 + B158DRAFT_1951 0.19 +0.4
88,132 + B158DRAFT_1951 0.19 +0.8
88,137 + B158DRAFT_1951 0.20 -0.7
88,140 - B158DRAFT_1951 0.20 +0.2
88,152 - B158DRAFT_1951 0.21 +0.0
88,182 + B158DRAFT_1951 0.24 -0.1
88,245 + B158DRAFT_1951 0.31 -0.2
88,245 + B158DRAFT_1951 0.31 -0.4
88,245 + B158DRAFT_1951 0.31 -0.7
88,245 + B158DRAFT_1951 0.31 +0.8
88,245 + B158DRAFT_1951 0.31 -0.2
88,245 + B158DRAFT_1951 0.31 +0.0
88,245 + B158DRAFT_1951 0.31 -0.3
88,245 + B158DRAFT_1951 0.31 -0.3
88,245 + B158DRAFT_1951 0.31 -0.3
88,245 + B158DRAFT_1951 0.31 -1.7
88,253 - B158DRAFT_1951 0.32 +0.1
88,253 - B158DRAFT_1951 0.32 -0.8
88,253 - B158DRAFT_1951 0.32 -0.0
88,253 - B158DRAFT_1951 0.32 -0.5
88,253 - B158DRAFT_1951 0.32 -0.6
88,253 - B158DRAFT_1951 0.32 -0.1
88,253 - B158DRAFT_1951 0.32 -0.2
88,372 + B158DRAFT_1951 0.44 +0.4
88,380 - B158DRAFT_1951 0.45 -0.4
88,380 - B158DRAFT_1951 0.45 -0.7
88,424 + B158DRAFT_1951 0.50 -0.7
88,432 - B158DRAFT_1951 0.51 -0.4
88,456 + B158DRAFT_1951 0.53 -2.4
88,492 + B158DRAFT_1951 0.57 -0.6
88,492 + B158DRAFT_1951 0.57 -1.0
88,492 + B158DRAFT_1951 0.57 -0.6
88,500 - B158DRAFT_1951 0.58 -0.1
88,560 + B158DRAFT_1951 0.64 -0.5
88,560 + B158DRAFT_1951 0.64 -0.7
88,580 + B158DRAFT_1951 0.66 -0.3
88,651 + B158DRAFT_1951 0.74 -0.8
88,686 - B158DRAFT_1951 0.77 -0.6
88,743 - B158DRAFT_1951 0.83 -0.3
88,759 - B158DRAFT_1951 0.85 -0.5
88,774 - B158DRAFT_1951 0.86 +0.1
88,794 + B158DRAFT_1951 0.89 -0.5
88,794 + B158DRAFT_1951 0.89 -0.9
88,809 + -0.4
88,809 + -0.8
88,817 - -0.4
88,835 + -0.5
88,835 + -0.6
88,852 + -0.3
88,853 + -0.4
88,855 + -0.3
88,860 - -0.5
88,860 - -0.0
88,860 - -0.0
88,860 - +0.5

Or see this region's nucleotide sequence