Experiment: m.b. Vancomycin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0929 and B158DRAFT_0930 overlap by 4 nucleotides B158DRAFT_0930 and B158DRAFT_0931 are separated by 229 nucleotides B158DRAFT_0931 and B158DRAFT_0932 are separated by 144 nucleotides B158DRAFT_0932 and B158DRAFT_0933 are separated by 3 nucleotides
B158DRAFT_0929: B158DRAFT_0929 - Uncharacterized protein conserved in bacteria, at 957,757 to 958,446
_0929
B158DRAFT_0930: B158DRAFT_0930 - RNA polymerase sigma factor, sigma-70 family, at 958,443 to 958,991
_0930
B158DRAFT_0931: B158DRAFT_0931 - amidase, hydantoinase/carbamoylase family, at 959,221 to 960,471
_0931
B158DRAFT_0932: B158DRAFT_0932 - hypothetical protein, at 960,616 to 961,119
_0932
B158DRAFT_0933: B158DRAFT_0933 - Na+/proline symporter, at 961,123 to 962,544
_0933
Position (kb) 959
960
961 Strain fitness (log2 ratio) -1
0
1
2 at 958.227 kb on + strand, within B158DRAFT_0929 at 958.227 kb on + strand, within B158DRAFT_0929 at 958.233 kb on + strand, within B158DRAFT_0929 at 958.235 kb on - strand, within B158DRAFT_0929 at 958.235 kb on - strand, within B158DRAFT_0929 at 958.322 kb on - strand, within B158DRAFT_0929 at 958.326 kb on + strand, within B158DRAFT_0929 at 958.335 kb on + strand, within B158DRAFT_0929 at 958.364 kb on - strand, within B158DRAFT_0929 at 958.390 kb on + strand at 958.390 kb on + strand at 958.398 kb on + strand at 958.469 kb on + strand at 958.477 kb on - strand at 958.477 kb on - strand at 958.513 kb on + strand, within B158DRAFT_0930 at 958.513 kb on + strand, within B158DRAFT_0930 at 958.521 kb on - strand, within B158DRAFT_0930 at 958.521 kb on - strand, within B158DRAFT_0930 at 958.521 kb on - strand, within B158DRAFT_0930 at 958.521 kb on - strand, within B158DRAFT_0930 at 958.549 kb on - strand, within B158DRAFT_0930 at 958.549 kb on - strand, within B158DRAFT_0930 at 958.588 kb on + strand, within B158DRAFT_0930 at 958.588 kb on + strand, within B158DRAFT_0930 at 958.596 kb on - strand, within B158DRAFT_0930 at 958.647 kb on + strand, within B158DRAFT_0930 at 958.696 kb on + strand, within B158DRAFT_0930 at 958.704 kb on - strand, within B158DRAFT_0930 at 958.758 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.790 kb on + strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.798 kb on - strand, within B158DRAFT_0930 at 958.815 kb on - strand, within B158DRAFT_0930 at 958.975 kb on - strand at 958.977 kb on + strand at 958.990 kb on - strand at 958.991 kb on + strand at 958.991 kb on + strand at 958.991 kb on + strand at 958.999 kb on - strand at 958.999 kb on - strand at 959.051 kb on + strand at 959.079 kb on - strand at 959.084 kb on - strand at 959.119 kb on + strand at 959.123 kb on - strand at 959.133 kb on + strand at 959.152 kb on + strand at 959.162 kb on + strand at 959.162 kb on + strand at 959.170 kb on - strand at 959.237 kb on + strand at 959.240 kb on - strand at 959.240 kb on - strand at 959.277 kb on + strand at 959.285 kb on - strand at 959.285 kb on - strand at 959.285 kb on - strand at 959.314 kb on + strand at 959.314 kb on + strand at 959.314 kb on + strand at 959.314 kb on + strand at 959.316 kb on + strand at 959.322 kb on - strand at 959.322 kb on - strand at 959.322 kb on - strand at 959.322 kb on - strand at 959.324 kb on - strand at 959.394 kb on - strand, within B158DRAFT_0931 at 959.394 kb on - strand, within B158DRAFT_0931 at 959.395 kb on + strand, within B158DRAFT_0931 at 959.395 kb on + strand, within B158DRAFT_0931 at 959.493 kb on + strand, within B158DRAFT_0931 at 959.514 kb on - strand, within B158DRAFT_0931 at 959.535 kb on - strand, within B158DRAFT_0931 at 959.559 kb on + strand, within B158DRAFT_0931 at 959.559 kb on + strand, within B158DRAFT_0931 at 959.604 kb on + strand, within B158DRAFT_0931 at 959.612 kb on - strand, within B158DRAFT_0931 at 959.612 kb on - strand, within B158DRAFT_0931 at 959.612 kb on - strand, within B158DRAFT_0931 at 959.620 kb on + strand, within B158DRAFT_0931 at 959.659 kb on - strand, within B158DRAFT_0931 at 959.692 kb on + strand, within B158DRAFT_0931 at 959.715 kb on + strand, within B158DRAFT_0931 at 959.760 kb on + strand, within B158DRAFT_0931 at 959.784 kb on + strand, within B158DRAFT_0931 at 959.792 kb on - strand, within B158DRAFT_0931 at 959.797 kb on - strand, within B158DRAFT_0931 at 959.886 kb on + strand, within B158DRAFT_0931 at 959.886 kb on + strand, within B158DRAFT_0931 at 959.888 kb on + strand, within B158DRAFT_0931 at 959.888 kb on + strand, within B158DRAFT_0931 at 959.888 kb on + strand, within B158DRAFT_0931 at 959.896 kb on - strand, within B158DRAFT_0931 at 959.896 kb on - strand, within B158DRAFT_0931 at 959.896 kb on - strand, within B158DRAFT_0931 at 959.920 kb on + strand, within B158DRAFT_0931 at 959.921 kb on + strand, within B158DRAFT_0931 at 959.921 kb on + strand, within B158DRAFT_0931 at 959.929 kb on - strand, within B158DRAFT_0931 at 959.945 kb on + strand, within B158DRAFT_0931 at 959.950 kb on + strand, within B158DRAFT_0931 at 959.958 kb on - strand, within B158DRAFT_0931 at 960.137 kb on - strand, within B158DRAFT_0931 at 960.159 kb on + strand, within B158DRAFT_0931 at 960.167 kb on - strand, within B158DRAFT_0931 at 960.169 kb on + strand, within B158DRAFT_0931 at 960.177 kb on - strand, within B158DRAFT_0931 at 960.188 kb on + strand, within B158DRAFT_0931 at 960.196 kb on - strand, within B158DRAFT_0931 at 960.196 kb on - strand, within B158DRAFT_0931 at 960.205 kb on + strand, within B158DRAFT_0931 at 960.213 kb on - strand, within B158DRAFT_0931 at 960.214 kb on + strand, within B158DRAFT_0931 at 960.224 kb on + strand, within B158DRAFT_0931 at 960.232 kb on - strand, within B158DRAFT_0931 at 960.318 kb on - strand, within B158DRAFT_0931 at 960.331 kb on - strand, within B158DRAFT_0931 at 960.370 kb on + strand at 960.378 kb on - strand at 960.379 kb on - strand at 960.430 kb on + strand at 960.514 kb on - strand at 960.603 kb on + strand at 960.750 kb on - strand, within B158DRAFT_0932 at 960.798 kb on + strand, within B158DRAFT_0932 at 960.856 kb on - strand, within B158DRAFT_0932 at 960.858 kb on + strand, within B158DRAFT_0932 at 960.864 kb on - strand, within B158DRAFT_0932 at 960.882 kb on + strand, within B158DRAFT_0932 at 960.905 kb on - strand, within B158DRAFT_0932 at 960.905 kb on - strand, within B158DRAFT_0932 at 960.916 kb on + strand, within B158DRAFT_0932 at 960.958 kb on + strand, within B158DRAFT_0932 at 960.967 kb on + strand, within B158DRAFT_0932 at 960.967 kb on + strand, within B158DRAFT_0932 at 960.968 kb on - strand, within B158DRAFT_0932 at 960.975 kb on - strand, within B158DRAFT_0932 at 960.975 kb on - strand, within B158DRAFT_0932 at 960.992 kb on + strand, within B158DRAFT_0932 at 961.120 kb on + strand at 961.172 kb on + strand at 961.235 kb on + strand at 961.243 kb on - strand at 961.243 kb on - strand at 961.250 kb on + strand at 961.258 kb on - strand at 961.373 kb on - strand, within B158DRAFT_0933 at 961.385 kb on - strand, within B158DRAFT_0933 at 961.385 kb on - strand, within B158DRAFT_0933 at 961.388 kb on + strand, within B158DRAFT_0933 at 961.388 kb on + strand, within B158DRAFT_0933 at 961.388 kb on + strand, within B158DRAFT_0933 at 961.388 kb on + strand, within B158DRAFT_0933 at 961.410 kb on + strand, within B158DRAFT_0933 at 961.435 kb on + strand, within B158DRAFT_0933 at 961.441 kb on + strand, within B158DRAFT_0933 at 961.441 kb on + strand, within B158DRAFT_0933 at 961.441 kb on + strand, within B158DRAFT_0933 at 961.441 kb on + strand, within B158DRAFT_0933 at 961.441 kb on + strand, within B158DRAFT_0933 at 961.443 kb on - strand, within B158DRAFT_0933 at 961.446 kb on + strand, within B158DRAFT_0933 at 961.449 kb on - strand, within B158DRAFT_0933 at 961.449 kb on - strand, within B158DRAFT_0933 at 961.449 kb on - strand, within B158DRAFT_0933 at 961.449 kb on - strand, within B158DRAFT_0933 at 961.449 kb on - strand, within B158DRAFT_0933
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.2 mg/ml remove 958,227 + B158DRAFT_0929 0.68 +0.6 958,227 + B158DRAFT_0929 0.68 -0.1 958,233 + B158DRAFT_0929 0.69 -0.5 958,235 - B158DRAFT_0929 0.69 +0.4 958,235 - B158DRAFT_0929 0.69 -0.2 958,322 - B158DRAFT_0929 0.82 -0.4 958,326 + B158DRAFT_0929 0.82 -0.4 958,335 + B158DRAFT_0929 0.84 -0.1 958,364 - B158DRAFT_0929 0.88 -0.1 958,390 + +0.5 958,390 + +0.3 958,398 + -0.2 958,469 + -0.1 958,477 - -0.2 958,477 - -0.6 958,513 + B158DRAFT_0930 0.13 -0.1 958,513 + B158DRAFT_0930 0.13 +0.5 958,521 - B158DRAFT_0930 0.14 +0.7 958,521 - B158DRAFT_0930 0.14 -0.5 958,521 - B158DRAFT_0930 0.14 -0.1 958,521 - B158DRAFT_0930 0.14 -0.0 958,549 - B158DRAFT_0930 0.19 -0.5 958,549 - B158DRAFT_0930 0.19 +0.3 958,588 + B158DRAFT_0930 0.26 -0.3 958,588 + B158DRAFT_0930 0.26 +0.4 958,596 - B158DRAFT_0930 0.28 -0.4 958,647 + B158DRAFT_0930 0.37 -0.2 958,696 + B158DRAFT_0930 0.46 -0.5 958,704 - B158DRAFT_0930 0.48 +1.9 958,758 + B158DRAFT_0930 0.57 -0.2 958,790 + B158DRAFT_0930 0.63 +0.3 958,790 + B158DRAFT_0930 0.63 -0.6 958,790 + B158DRAFT_0930 0.63 -0.1 958,790 + B158DRAFT_0930 0.63 +0.4 958,790 + B158DRAFT_0930 0.63 -0.1 958,790 + B158DRAFT_0930 0.63 +0.2 958,790 + B158DRAFT_0930 0.63 -0.2 958,790 + B158DRAFT_0930 0.63 -0.1 958,790 + B158DRAFT_0930 0.63 -0.4 958,790 + B158DRAFT_0930 0.63 -0.3 958,790 + B158DRAFT_0930 0.63 -0.2 958,790 + B158DRAFT_0930 0.63 -0.0 958,790 + B158DRAFT_0930 0.63 +0.1 958,790 + B158DRAFT_0930 0.63 +0.1 958,790 + B158DRAFT_0930 0.63 +0.1 958,790 + B158DRAFT_0930 0.63 -0.3 958,798 - B158DRAFT_0930 0.65 -0.6 958,798 - B158DRAFT_0930 0.65 -0.0 958,798 - B158DRAFT_0930 0.65 +0.4 958,798 - B158DRAFT_0930 0.65 -0.0 958,798 - B158DRAFT_0930 0.65 +0.6 958,798 - B158DRAFT_0930 0.65 -0.3 958,798 - B158DRAFT_0930 0.65 +0.0 958,798 - B158DRAFT_0930 0.65 +1.2 958,798 - B158DRAFT_0930 0.65 -0.3 958,798 - B158DRAFT_0930 0.65 -0.1 958,798 - B158DRAFT_0930 0.65 +0.2 958,798 - B158DRAFT_0930 0.65 -0.2 958,798 - B158DRAFT_0930 0.65 -0.2 958,798 - B158DRAFT_0930 0.65 +0.2 958,798 - B158DRAFT_0930 0.65 -0.0 958,798 - B158DRAFT_0930 0.65 -0.1 958,798 - B158DRAFT_0930 0.65 +0.2 958,798 - B158DRAFT_0930 0.65 -0.7 958,798 - B158DRAFT_0930 0.65 +0.0 958,798 - B158DRAFT_0930 0.65 -0.1 958,798 - B158DRAFT_0930 0.65 -0.1 958,798 - B158DRAFT_0930 0.65 -0.2 958,798 - B158DRAFT_0930 0.65 +0.3 958,815 - B158DRAFT_0930 0.68 -1.1 958,975 - +0.1 958,977 + -0.3 958,990 - -0.1 958,991 + -0.5 958,991 + +0.0 958,991 + +0.6 958,999 - -0.2 958,999 - +1.3 959,051 + -0.4 959,079 - -0.7 959,084 - -0.5 959,119 + -0.2 959,123 - -0.5 959,133 + -0.2 959,152 + -0.2 959,162 + +0.0 959,162 + -0.2 959,170 - -0.3 959,237 + +0.0 959,240 - +0.4 959,240 - -0.2 959,277 + -0.1 959,285 - +0.0 959,285 - -0.1 959,285 - -0.2 959,314 + +0.3 959,314 + -0.4 959,314 + +0.3 959,314 + -0.1 959,316 + -0.2 959,322 - +1.5 959,322 - -0.3 959,322 - -0.5 959,322 - +0.1 959,324 - -0.4 959,394 - B158DRAFT_0931 0.14 -0.3 959,394 - B158DRAFT_0931 0.14 -0.3 959,395 + B158DRAFT_0931 0.14 -0.5 959,395 + B158DRAFT_0931 0.14 -0.7 959,493 + B158DRAFT_0931 0.22 -0.0 959,514 - B158DRAFT_0931 0.23 +0.1 959,535 - B158DRAFT_0931 0.25 -0.4 959,559 + B158DRAFT_0931 0.27 -0.2 959,559 + B158DRAFT_0931 0.27 -0.4 959,604 + B158DRAFT_0931 0.31 +0.3 959,612 - B158DRAFT_0931 0.31 -0.2 959,612 - B158DRAFT_0931 0.31 -0.1 959,612 - B158DRAFT_0931 0.31 -0.5 959,620 + B158DRAFT_0931 0.32 -1.3 959,659 - B158DRAFT_0931 0.35 +1.5 959,692 + B158DRAFT_0931 0.38 -0.0 959,715 + B158DRAFT_0931 0.39 +0.1 959,760 + B158DRAFT_0931 0.43 +0.6 959,784 + B158DRAFT_0931 0.45 +0.0 959,792 - B158DRAFT_0931 0.46 -0.4 959,797 - B158DRAFT_0931 0.46 -0.5 959,886 + B158DRAFT_0931 0.53 +0.0 959,886 + B158DRAFT_0931 0.53 -0.5 959,888 + B158DRAFT_0931 0.53 -0.6 959,888 + B158DRAFT_0931 0.53 -0.1 959,888 + B158DRAFT_0931 0.53 -0.0 959,896 - B158DRAFT_0931 0.54 +0.2 959,896 - B158DRAFT_0931 0.54 -0.2 959,896 - B158DRAFT_0931 0.54 -0.0 959,920 + B158DRAFT_0931 0.56 -0.1 959,921 + B158DRAFT_0931 0.56 +0.2 959,921 + B158DRAFT_0931 0.56 +0.2 959,929 - B158DRAFT_0931 0.57 +0.0 959,945 + B158DRAFT_0931 0.58 +0.1 959,950 + B158DRAFT_0931 0.58 +0.4 959,958 - B158DRAFT_0931 0.59 -0.3 960,137 - B158DRAFT_0931 0.73 +0.1 960,159 + B158DRAFT_0931 0.75 +0.4 960,167 - B158DRAFT_0931 0.76 +0.0 960,169 + B158DRAFT_0931 0.76 +0.0 960,177 - B158DRAFT_0931 0.76 -0.3 960,188 + B158DRAFT_0931 0.77 -0.3 960,196 - B158DRAFT_0931 0.78 -0.0 960,196 - B158DRAFT_0931 0.78 +0.4 960,205 + B158DRAFT_0931 0.79 -0.3 960,213 - B158DRAFT_0931 0.79 -0.4 960,214 + B158DRAFT_0931 0.79 -0.3 960,224 + B158DRAFT_0931 0.80 -0.1 960,232 - B158DRAFT_0931 0.81 -0.1 960,318 - B158DRAFT_0931 0.88 +0.1 960,331 - B158DRAFT_0931 0.89 -0.1 960,370 + +0.2 960,378 - -0.3 960,379 - +0.5 960,430 + +0.3 960,514 - -0.2 960,603 + -0.2 960,750 - B158DRAFT_0932 0.27 +1.5 960,798 + B158DRAFT_0932 0.36 -0.5 960,856 - B158DRAFT_0932 0.48 +0.8 960,858 + B158DRAFT_0932 0.48 -0.0 960,864 - B158DRAFT_0932 0.49 +0.0 960,882 + B158DRAFT_0932 0.53 -0.2 960,905 - B158DRAFT_0932 0.57 +0.0 960,905 - B158DRAFT_0932 0.57 -0.3 960,916 + B158DRAFT_0932 0.60 +0.4 960,958 + B158DRAFT_0932 0.68 -0.8 960,967 + B158DRAFT_0932 0.70 -0.1 960,967 + B158DRAFT_0932 0.70 -0.2 960,968 - B158DRAFT_0932 0.70 -0.3 960,975 - B158DRAFT_0932 0.71 +0.2 960,975 - B158DRAFT_0932 0.71 -0.0 960,992 + B158DRAFT_0932 0.75 +0.1 961,120 + -0.0 961,172 + +0.1 961,235 + -0.2 961,243 - -0.5 961,243 - +0.2 961,250 + -0.0 961,258 - -0.2 961,373 - B158DRAFT_0933 0.18 -0.1 961,385 - B158DRAFT_0933 0.18 -0.0 961,385 - B158DRAFT_0933 0.18 +0.7 961,388 + B158DRAFT_0933 0.19 -0.0 961,388 + B158DRAFT_0933 0.19 +0.5 961,388 + B158DRAFT_0933 0.19 +0.2 961,388 + B158DRAFT_0933 0.19 -0.3 961,410 + B158DRAFT_0933 0.20 -0.2 961,435 + B158DRAFT_0933 0.22 -0.5 961,441 + B158DRAFT_0933 0.22 +0.0 961,441 + B158DRAFT_0933 0.22 +0.3 961,441 + B158DRAFT_0933 0.22 -0.8 961,441 + B158DRAFT_0933 0.22 +0.5 961,441 + B158DRAFT_0933 0.22 -0.6 961,443 - B158DRAFT_0933 0.23 -0.4 961,446 + B158DRAFT_0933 0.23 +0.1 961,449 - B158DRAFT_0933 0.23 +0.1 961,449 - B158DRAFT_0933 0.23 +0.1 961,449 - B158DRAFT_0933 0.23 -0.3 961,449 - B158DRAFT_0933 0.23 -1.4 961,449 - B158DRAFT_0933 0.23 -0.0
Or see this region's nucleotide sequence