Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0269

Experiment: m.b. Vancomycin 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0268 and B158DRAFT_0269 are separated by 387 nucleotidesB158DRAFT_0269 and B158DRAFT_0270 are separated by 91 nucleotides B158DRAFT_0268: B158DRAFT_0268 - Protein of unknown function (DUF3050)., at 272,834 to 273,577 _0268 B158DRAFT_0269: B158DRAFT_0269 - hypothetical protein, at 273,965 to 274,501 _0269 B158DRAFT_0270: B158DRAFT_0270 - VanZ like family., at 274,593 to 275,720 _0270 Position (kb) 273 274 275Strain fitness (log2 ratio) -1 0 1at 272.993 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.169 kb on + strand, within B158DRAFT_0268at 273.191 kb on + strand, within B158DRAFT_0268at 273.193 kb on + strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.218 kb on + strand, within B158DRAFT_0268at 273.239 kb on + strand, within B158DRAFT_0268at 273.239 kb on + strand, within B158DRAFT_0268at 273.333 kb on - strand, within B158DRAFT_0268at 273.416 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.473 kb on - strand, within B158DRAFT_0268at 273.515 kb on - strandat 273.533 kb on - strandat 273.537 kb on + strandat 273.555 kb on - strandat 273.556 kb on - strandat 273.597 kb on + strandat 273.605 kb on - strandat 273.742 kb on - strandat 273.899 kb on + strandat 273.899 kb on + strandat 273.899 kb on + strandat 273.907 kb on - strandat 273.907 kb on - strandat 273.907 kb on - strandat 273.949 kb on + strandat 274.024 kb on + strand, within B158DRAFT_0269at 274.025 kb on - strand, within B158DRAFT_0269at 274.031 kb on - strand, within B158DRAFT_0269at 274.031 kb on - strand, within B158DRAFT_0269at 274.080 kb on + strand, within B158DRAFT_0269at 274.105 kb on + strand, within B158DRAFT_0269at 274.113 kb on - strand, within B158DRAFT_0269at 274.113 kb on - strand, within B158DRAFT_0269at 274.138 kb on + strand, within B158DRAFT_0269at 274.147 kb on + strand, within B158DRAFT_0269at 274.155 kb on - strand, within B158DRAFT_0269at 274.155 kb on - strand, within B158DRAFT_0269at 274.161 kb on + strand, within B158DRAFT_0269at 274.169 kb on - strand, within B158DRAFT_0269at 274.177 kb on - strand, within B158DRAFT_0269at 274.207 kb on + strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.215 kb on - strand, within B158DRAFT_0269at 274.259 kb on - strand, within B158DRAFT_0269at 274.260 kb on - strand, within B158DRAFT_0269at 274.296 kb on + strand, within B158DRAFT_0269at 274.304 kb on - strand, within B158DRAFT_0269at 274.304 kb on - strand, within B158DRAFT_0269at 274.304 kb on - strand, within B158DRAFT_0269at 274.314 kb on - strand, within B158DRAFT_0269at 274.439 kb on + strand, within B158DRAFT_0269at 274.452 kb on - strandat 274.474 kb on + strandat 274.486 kb on + strandat 274.486 kb on + strandat 274.486 kb on + strandat 274.494 kb on - strandat 274.549 kb on - strandat 274.598 kb on - strandat 274.611 kb on - strandat 274.617 kb on + strandat 274.621 kb on - strandat 274.635 kb on + strandat 274.638 kb on - strandat 274.638 kb on - strandat 274.643 kb on - strandat 274.696 kb on + strandat 274.696 kb on + strandat 274.704 kb on - strandat 274.704 kb on - strandat 274.704 kb on - strandat 274.704 kb on - strandat 274.710 kb on + strand, within B158DRAFT_0270at 274.710 kb on + strand, within B158DRAFT_0270at 274.728 kb on - strand, within B158DRAFT_0270at 274.728 kb on - strand, within B158DRAFT_0270at 274.746 kb on - strand, within B158DRAFT_0270at 274.862 kb on + strand, within B158DRAFT_0270at 274.862 kb on + strand, within B158DRAFT_0270at 274.870 kb on - strand, within B158DRAFT_0270at 274.870 kb on - strand, within B158DRAFT_0270at 274.870 kb on - strand, within B158DRAFT_0270at 274.870 kb on - strand, within B158DRAFT_0270at 274.880 kb on - strand, within B158DRAFT_0270at 275.027 kb on + strand, within B158DRAFT_0270at 275.066 kb on + strand, within B158DRAFT_0270at 275.074 kb on - strand, within B158DRAFT_0270at 275.127 kb on + strand, within B158DRAFT_0270at 275.127 kb on + strand, within B158DRAFT_0270at 275.127 kb on + strand, within B158DRAFT_0270at 275.132 kb on + strand, within B158DRAFT_0270at 275.177 kb on + strand, within B158DRAFT_0270at 275.189 kb on + strand, within B158DRAFT_0270at 275.196 kb on + strand, within B158DRAFT_0270at 275.221 kb on + strand, within B158DRAFT_0270at 275.221 kb on + strand, within B158DRAFT_0270at 275.221 kb on + strand, within B158DRAFT_0270at 275.229 kb on - strand, within B158DRAFT_0270at 275.229 kb on - strand, within B158DRAFT_0270at 275.284 kb on - strand, within B158DRAFT_0270at 275.301 kb on + strand, within B158DRAFT_0270at 275.322 kb on + strand, within B158DRAFT_0270at 275.330 kb on + strand, within B158DRAFT_0270at 275.330 kb on - strand, within B158DRAFT_0270at 275.330 kb on - strand, within B158DRAFT_0270at 275.340 kb on - strand, within B158DRAFT_0270at 275.365 kb on - strand, within B158DRAFT_0270at 275.394 kb on + strand, within B158DRAFT_0270at 275.403 kb on - strand, within B158DRAFT_0270at 275.478 kb on + strand, within B158DRAFT_0270at 275.488 kb on + strand, within B158DRAFT_0270at 275.491 kb on - strand, within B158DRAFT_0270at 275.495 kb on + strand, within B158DRAFT_0270

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.2 mg/ml
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272,993 + B158DRAFT_0268 0.21 -0.9
273,043 + B158DRAFT_0268 0.28 +1.5
273,043 + B158DRAFT_0268 0.28 +0.8
273,043 + B158DRAFT_0268 0.28 -0.3
273,043 + B158DRAFT_0268 0.28 +0.2
273,043 + B158DRAFT_0268 0.28 -0.3
273,051 - B158DRAFT_0268 0.29 -0.3
273,051 - B158DRAFT_0268 0.29 -0.3
273,051 - B158DRAFT_0268 0.29 -1.1
273,169 + B158DRAFT_0268 0.45 -0.4
273,191 + B158DRAFT_0268 0.48 -0.0
273,193 + B158DRAFT_0268 0.48 -0.2
273,201 - B158DRAFT_0268 0.49 -0.4
273,201 - B158DRAFT_0268 0.49 +0.2
273,201 - B158DRAFT_0268 0.49 +0.1
273,218 + B158DRAFT_0268 0.52 +0.4
273,239 + B158DRAFT_0268 0.54 -0.1
273,239 + B158DRAFT_0268 0.54 -1.1
273,333 - B158DRAFT_0268 0.67 -0.2
273,416 + B158DRAFT_0268 0.78 -0.3
273,465 + B158DRAFT_0268 0.85 -0.3
273,465 + B158DRAFT_0268 0.85 +0.2
273,465 + B158DRAFT_0268 0.85 -0.3
273,473 - B158DRAFT_0268 0.86 -0.4
273,515 - -0.2
273,533 - +0.0
273,537 + +0.5
273,555 - -0.5
273,556 - +0.2
273,597 + -0.2
273,605 - -0.3
273,742 - +0.3
273,899 + -0.2
273,899 + -0.4
273,899 + -0.5
273,907 - -1.2
273,907 - -0.4
273,907 - -0.0
273,949 + -0.4
274,024 + B158DRAFT_0269 0.11 +0.4
274,025 - B158DRAFT_0269 0.11 +0.0
274,031 - B158DRAFT_0269 0.12 -1.2
274,031 - B158DRAFT_0269 0.12 +0.9
274,080 + B158DRAFT_0269 0.21 -0.7
274,105 + B158DRAFT_0269 0.26 -0.1
274,113 - B158DRAFT_0269 0.28 -0.1
274,113 - B158DRAFT_0269 0.28 -0.7
274,138 + B158DRAFT_0269 0.32 -0.2
274,147 + B158DRAFT_0269 0.34 +1.6
274,155 - B158DRAFT_0269 0.35 +0.6
274,155 - B158DRAFT_0269 0.35 +0.4
274,161 + B158DRAFT_0269 0.36 +0.0
274,169 - B158DRAFT_0269 0.38 -0.2
274,177 - B158DRAFT_0269 0.39 -0.6
274,207 + B158DRAFT_0269 0.45 -0.4
274,215 - B158DRAFT_0269 0.47 -0.7
274,215 - B158DRAFT_0269 0.47 -0.2
274,215 - B158DRAFT_0269 0.47 -0.1
274,215 - B158DRAFT_0269 0.47 +0.0
274,215 - B158DRAFT_0269 0.47 +1.6
274,259 - B158DRAFT_0269 0.55 -0.2
274,260 - B158DRAFT_0269 0.55 -0.1
274,296 + B158DRAFT_0269 0.62 -0.4
274,304 - B158DRAFT_0269 0.63 +0.1
274,304 - B158DRAFT_0269 0.63 +0.5
274,304 - B158DRAFT_0269 0.63 +0.3
274,314 - B158DRAFT_0269 0.65 +0.3
274,439 + B158DRAFT_0269 0.88 -0.2
274,452 - -0.4
274,474 + -0.0
274,486 + -0.1
274,486 + -0.2
274,486 + -0.8
274,494 - -0.1
274,549 - -0.4
274,598 - +0.2
274,611 - -0.5
274,617 + -0.0
274,621 - +0.2
274,635 + -0.3
274,638 - -0.2
274,638 - -1.0
274,643 - -0.4
274,696 + -0.1
274,696 + -0.2
274,704 - -0.3
274,704 - +0.1
274,704 - -0.2
274,704 - -0.1
274,710 + B158DRAFT_0270 0.10 +0.3
274,710 + B158DRAFT_0270 0.10 +0.6
274,728 - B158DRAFT_0270 0.12 -0.4
274,728 - B158DRAFT_0270 0.12 -1.0
274,746 - B158DRAFT_0270 0.14 +0.0
274,862 + B158DRAFT_0270 0.24 -0.3
274,862 + B158DRAFT_0270 0.24 -0.1
274,870 - B158DRAFT_0270 0.25 -0.1
274,870 - B158DRAFT_0270 0.25 -0.4
274,870 - B158DRAFT_0270 0.25 -0.3
274,870 - B158DRAFT_0270 0.25 -0.1
274,880 - B158DRAFT_0270 0.25 -0.4
275,027 + B158DRAFT_0270 0.38 +0.2
275,066 + B158DRAFT_0270 0.42 -0.3
275,074 - B158DRAFT_0270 0.43 +0.5
275,127 + B158DRAFT_0270 0.47 -0.2
275,127 + B158DRAFT_0270 0.47 +0.3
275,127 + B158DRAFT_0270 0.47 -0.2
275,132 + B158DRAFT_0270 0.48 +0.0
275,177 + B158DRAFT_0270 0.52 -0.4
275,189 + B158DRAFT_0270 0.53 -0.1
275,196 + B158DRAFT_0270 0.53 +0.1
275,221 + B158DRAFT_0270 0.56 -0.3
275,221 + B158DRAFT_0270 0.56 -0.3
275,221 + B158DRAFT_0270 0.56 -0.8
275,229 - B158DRAFT_0270 0.56 -0.1
275,229 - B158DRAFT_0270 0.56 +0.2
275,284 - B158DRAFT_0270 0.61 -0.2
275,301 + B158DRAFT_0270 0.63 +0.6
275,322 + B158DRAFT_0270 0.65 -0.3
275,330 + B158DRAFT_0270 0.65 +0.1
275,330 - B158DRAFT_0270 0.65 -0.4
275,330 - B158DRAFT_0270 0.65 +0.4
275,340 - B158DRAFT_0270 0.66 -0.1
275,365 - B158DRAFT_0270 0.68 -0.1
275,394 + B158DRAFT_0270 0.71 +0.4
275,403 - B158DRAFT_0270 0.72 -0.4
275,478 + B158DRAFT_0270 0.78 +0.3
275,488 + B158DRAFT_0270 0.79 -0.8
275,491 - B158DRAFT_0270 0.80 -0.4
275,495 + B158DRAFT_0270 0.80 -0.4

Or see this region's nucleotide sequence