Experiment: Fusidic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5073 and PfGW456L13_5074 are separated by 11 nucleotides PfGW456L13_5074 and PfGW456L13_5075 overlap by 1 nucleotides
PfGW456L13_5073 - PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69), at 5,657,784 to 5,659,523
_5073
PfGW456L13_5074 - 1-phosphofructokinase (EC 2.7.1.56), at 5,659,535 to 5,660,473
_5074
PfGW456L13_5075 - Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9), at 5,660,473 to 5,663,334
_5075
Position (kb) 5659
5660
5661 Strain fitness (log2 ratio) -2
-1
0
1 at 5658.613 kb on + strand, within PfGW456L13_5073 at 5658.614 kb on - strand, within PfGW456L13_5073 at 5658.614 kb on - strand, within PfGW456L13_5073 at 5658.614 kb on - strand, within PfGW456L13_5073 at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.622 kb on + strand at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.622 kb on + strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.623 kb on - strand, within PfGW456L13_5073 at 5658.803 kb on + strand, within PfGW456L13_5073 at 5658.804 kb on - strand, within PfGW456L13_5073 at 5658.804 kb on - strand, within PfGW456L13_5073 at 5658.805 kb on + strand, within PfGW456L13_5073 at 5658.805 kb on + strand, within PfGW456L13_5073 at 5658.806 kb on - strand, within PfGW456L13_5073 at 5658.806 kb on - strand, within PfGW456L13_5073 at 5658.806 kb on - strand, within PfGW456L13_5073 at 5658.806 kb on - strand, within PfGW456L13_5073 at 5658.908 kb on + strand, within PfGW456L13_5073 at 5658.909 kb on - strand, within PfGW456L13_5073 at 5658.934 kb on + strand, within PfGW456L13_5073 at 5658.934 kb on + strand, within PfGW456L13_5073 at 5659.073 kb on - strand, within PfGW456L13_5073 at 5659.073 kb on - strand, within PfGW456L13_5073 at 5659.516 kb on - strand at 5659.516 kb on - strand at 5659.536 kb on + strand at 5659.536 kb on + strand at 5659.536 kb on + strand at 5659.537 kb on - strand at 5659.537 kb on - strand at 5659.537 kb on - strand at 5659.537 kb on - strand at 5660.197 kb on + strand, within PfGW456L13_5074 at 5660.458 kb on + strand at 5660.462 kb on + strand at 5660.462 kb on + strand at 5660.462 kb on + strand at 5660.691 kb on + strand at 5660.691 kb on + strand at 5660.692 kb on - strand at 5660.804 kb on + strand, within PfGW456L13_5075 at 5660.805 kb on - strand, within PfGW456L13_5075 at 5660.805 kb on - strand, within PfGW456L13_5075 at 5661.202 kb on + strand, within PfGW456L13_5075
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.03 mg/ml remove 5,658,613 + PfGW456L13_5073 0.48 +0.0 5,658,614 - PfGW456L13_5073 0.48 +0.7 5,658,614 - PfGW456L13_5073 0.48 +0.6 5,658,614 - PfGW456L13_5073 0.48 -0.6 5,658,622 + PfGW456L13_5073 0.48 +0.7 5,658,622 + PfGW456L13_5073 0.48 +0.2 5,658,622 + PfGW456L13_5073 0.48 +0.9 5,658,622 + PfGW456L13_5073 0.48 -0.4 5,658,622 + PfGW456L13_5073 0.48 -1.1 5,658,622 + -1.4 5,658,622 + PfGW456L13_5073 0.48 -2.0 5,658,622 + PfGW456L13_5073 0.48 +0.3 5,658,623 - PfGW456L13_5073 0.48 -0.3 5,658,623 - PfGW456L13_5073 0.48 +0.5 5,658,623 - PfGW456L13_5073 0.48 +0.5 5,658,623 - PfGW456L13_5073 0.48 +0.7 5,658,623 - PfGW456L13_5073 0.48 +0.7 5,658,623 - PfGW456L13_5073 0.48 +0.9 5,658,623 - PfGW456L13_5073 0.48 -0.2 5,658,623 - PfGW456L13_5073 0.48 +0.5 5,658,803 + PfGW456L13_5073 0.59 +0.1 5,658,804 - PfGW456L13_5073 0.59 +1.4 5,658,804 - PfGW456L13_5073 0.59 -0.1 5,658,805 + PfGW456L13_5073 0.59 -0.6 5,658,805 + PfGW456L13_5073 0.59 -0.4 5,658,806 - PfGW456L13_5073 0.59 -0.3 5,658,806 - PfGW456L13_5073 0.59 +0.3 5,658,806 - PfGW456L13_5073 0.59 +0.2 5,658,806 - PfGW456L13_5073 0.59 +0.3 5,658,908 + PfGW456L13_5073 0.65 -0.4 5,658,909 - PfGW456L13_5073 0.65 -0.6 5,658,934 + PfGW456L13_5073 0.66 -0.9 5,658,934 + PfGW456L13_5073 0.66 +1.1 5,659,073 - PfGW456L13_5073 0.74 -0.2 5,659,073 - PfGW456L13_5073 0.74 +0.0 5,659,516 - +1.3 5,659,516 - +0.8 5,659,536 + +0.8 5,659,536 + -0.6 5,659,536 + +0.7 5,659,537 - -0.3 5,659,537 - +0.7 5,659,537 - -0.2 5,659,537 - +0.5 5,660,197 + PfGW456L13_5074 0.71 -0.7 5,660,458 + +0.1 5,660,462 + +0.2 5,660,462 + +0.4 5,660,462 + -0.6 5,660,691 + -0.5 5,660,691 + -1.7 5,660,692 - -0.4 5,660,804 + PfGW456L13_5075 0.12 +0.1 5,660,805 - PfGW456L13_5075 0.12 +0.3 5,660,805 - PfGW456L13_5075 0.12 +0.0 5,661,202 + PfGW456L13_5075 0.25 +0.8
Or see this region's nucleotide sequence