Experiment: Fusidic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_21 and PfGW456L13_22 are separated by 90 nucleotides PfGW456L13_22 and PfGW456L13_23 are separated by 149 nucleotides PfGW456L13_23 and PfGW456L13_24 are separated by 193 nucleotides
PfGW456L13_21 - Multidrug resistance transporter, Bcr/CflA family, at 25,785 to 26,981
_21
PfGW456L13_22 - Copper chaperone, at 27,072 to 27,269
_22
PfGW456L13_23 - FIG00953575: hypothetical protein, at 27,419 to 27,802
_23
PfGW456L13_24 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 27,996 to 30,389
_24
Position (kb) 27
28 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 26.138 kb on - strand, within PfGW456L13_21 at 26.309 kb on - strand at 26.362 kb on - strand, within PfGW456L13_21 at 26.387 kb on - strand, within PfGW456L13_21 at 26.387 kb on - strand, within PfGW456L13_21 at 26.421 kb on + strand, within PfGW456L13_21 at 26.422 kb on - strand, within PfGW456L13_21 at 26.719 kb on + strand, within PfGW456L13_21 at 26.719 kb on + strand, within PfGW456L13_21 at 26.806 kb on + strand, within PfGW456L13_21 at 26.806 kb on + strand, within PfGW456L13_21 at 26.807 kb on - strand, within PfGW456L13_21 at 26.807 kb on - strand, within PfGW456L13_21 at 26.807 kb on - strand, within PfGW456L13_21 at 26.839 kb on + strand, within PfGW456L13_21 at 26.840 kb on - strand, within PfGW456L13_21 at 26.914 kb on + strand at 26.915 kb on - strand at 26.915 kb on - strand at 26.969 kb on + strand at 26.970 kb on - strand at 27.021 kb on + strand at 27.060 kb on + strand at 27.060 kb on + strand at 27.064 kb on + strand at 27.065 kb on - strand at 27.500 kb on + strand, within PfGW456L13_23 at 27.501 kb on - strand, within PfGW456L13_23 at 27.501 kb on - strand, within PfGW456L13_23 at 27.501 kb on - strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.642 kb on + strand, within PfGW456L13_23 at 27.642 kb on + strand, within PfGW456L13_23 at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.809 kb on + strand at 27.809 kb on + strand at 27.849 kb on - strand at 27.849 kb on - strand at 27.924 kb on + strand at 27.924 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.979 kb on + strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 28.168 kb on + strand at 28.168 kb on + strand at 28.168 kb on + strand at 28.168 kb on + strand at 28.168 kb on + strand at 28.168 kb on + strand at 28.168 kb on + strand at 28.169 kb on - strand at 28.169 kb on - strand at 28.169 kb on - strand at 28.169 kb on - strand at 28.169 kb on - strand at 28.169 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.03 mg/ml remove 26,138 - PfGW456L13_21 0.29 -0.2 26,309 - +2.0 26,362 - PfGW456L13_21 0.48 -0.4 26,387 - PfGW456L13_21 0.50 -0.8 26,387 - PfGW456L13_21 0.50 -0.3 26,421 + PfGW456L13_21 0.53 +1.1 26,422 - PfGW456L13_21 0.53 -0.9 26,719 + PfGW456L13_21 0.78 -1.2 26,719 + PfGW456L13_21 0.78 -0.7 26,806 + PfGW456L13_21 0.85 -0.2 26,806 + PfGW456L13_21 0.85 -0.8 26,807 - PfGW456L13_21 0.85 -2.0 26,807 - PfGW456L13_21 0.85 +0.2 26,807 - PfGW456L13_21 0.85 -0.3 26,839 + PfGW456L13_21 0.88 -0.0 26,840 - PfGW456L13_21 0.88 +3.2 26,914 + -0.6 26,915 - -0.6 26,915 - -2.1 26,969 + +0.2 26,970 - -0.2 27,021 + -0.0 27,060 + +0.2 27,060 + -0.8 27,064 + +0.2 27,065 - -1.0 27,500 + PfGW456L13_23 0.21 +0.1 27,501 - PfGW456L13_23 0.21 -0.5 27,501 - PfGW456L13_23 0.21 -0.4 27,501 - PfGW456L13_23 0.21 +0.8 27,563 + PfGW456L13_23 0.38 +0.3 27,563 + PfGW456L13_23 0.38 +0.4 27,563 + PfGW456L13_23 0.38 +0.5 27,563 + PfGW456L13_23 0.38 +0.1 27,563 + PfGW456L13_23 0.38 +0.3 27,563 + PfGW456L13_23 0.38 -0.9 27,563 + PfGW456L13_23 0.38 +2.8 27,563 + PfGW456L13_23 0.38 +1.3 27,564 - PfGW456L13_23 0.38 -0.1 27,564 - PfGW456L13_23 0.38 -0.2 27,564 - PfGW456L13_23 0.38 -0.2 27,564 - PfGW456L13_23 0.38 -0.2 27,564 - PfGW456L13_23 0.38 -0.3 27,642 + PfGW456L13_23 0.58 +0.8 27,642 + PfGW456L13_23 0.58 +0.7 27,773 + +1.0 27,773 + +1.1 27,773 + +1.2 27,773 + +0.1 27,773 + +0.2 27,773 + +0.3 27,773 + +0.9 27,773 + +0.4 27,773 + +1.2 27,773 + -0.8 27,774 - +0.0 27,774 - +0.1 27,774 - -0.6 27,774 - -0.1 27,774 - +0.2 27,774 - -1.9 27,774 - +1.6 27,774 - +1.6 27,774 - -0.2 27,774 - -0.5 27,807 + +0.4 27,807 + +0.6 27,807 + +0.3 27,807 + -0.1 27,807 + -1.1 27,807 + +0.2 27,807 + +0.3 27,807 + +0.2 27,807 + +1.8 27,807 + +1.6 27,807 + +0.4 27,807 + -0.4 27,807 + +0.9 27,807 + -0.3 27,807 + +0.5 27,807 + -0.1 27,807 + +0.2 27,807 + +1.1 27,807 + +0.1 27,807 + +0.1 27,807 + +0.1 27,807 + -0.3 27,807 + -0.8 27,807 + +0.8 27,807 + +1.6 27,807 + +0.6 27,807 + +0.2 27,807 + +1.0 27,808 - +0.8 27,808 - -0.4 27,808 - -0.3 27,808 - -1.8 27,808 - -0.2 27,808 - +0.2 27,808 - -0.1 27,808 - -0.0 27,808 - -0.4 27,808 - +0.3 27,808 - +0.1 27,808 - -1.8 27,808 - -0.3 27,808 - -0.2 27,808 - -0.3 27,808 - +0.4 27,808 - -2.1 27,808 - -0.3 27,808 - -0.4 27,808 - -0.0 27,808 - +0.4 27,808 - +0.5 27,808 - +1.2 27,808 - -0.1 27,808 - -0.5 27,808 - -1.0 27,808 - -0.3 27,808 - +2.6 27,808 - -0.2 27,808 - -1.0 27,808 - +0.2 27,808 - -0.3 27,808 - -0.1 27,808 - -0.2 27,808 - +0.5 27,809 + -0.1 27,809 + +0.2 27,849 - -0.9 27,849 - +0.0 27,924 + +0.6 27,924 + +1.5 27,976 + -0.8 27,976 + +0.4 27,976 + +0.3 27,976 + +0.4 27,976 + +0.2 27,976 + +0.6 27,976 + +0.5 27,977 - +0.5 27,977 - -0.5 27,977 - +0.1 27,977 - +0.4 27,977 - +1.1 27,977 - +0.4 27,979 + +1.0 27,980 - -0.2 27,980 - +0.1 27,980 - -0.1 27,980 - -0.8 27,980 - -0.3 27,980 - +0.6 28,168 + +0.6 28,168 + -0.9 28,168 + +0.2 28,168 + +0.8 28,168 + +1.1 28,168 + -0.5 28,168 + -0.6 28,169 - +0.1 28,169 - -0.0 28,169 - +0.8 28,169 - +0.6 28,169 - -0.6 28,169 - +3.2
Or see this region's nucleotide sequence